##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933871.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 949965 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5268994120836 34.0 31.0 34.0 31.0 34.0 2 32.756067855131505 34.0 31.0 34.0 31.0 34.0 3 32.80923507708179 34.0 31.0 34.0 31.0 34.0 4 36.15239824625118 37.0 35.0 37.0 35.0 37.0 5 36.17075576468607 37.0 35.0 37.0 35.0 37.0 6 35.80421594479797 37.0 35.0 37.0 35.0 37.0 7 36.07995031395893 37.0 35.0 37.0 35.0 37.0 8 36.091326522556095 37.0 37.0 37.0 35.0 37.0 9 37.95176980204534 39.0 38.0 39.0 35.0 39.0 10 37.64816177438116 39.0 37.0 39.0 35.0 39.0 11 37.5679493455022 39.0 37.0 39.0 35.0 39.0 12 37.42055128346834 39.0 37.0 39.0 35.0 39.0 13 37.39760728026822 39.0 37.0 39.0 35.0 39.0 14 38.684834704436476 40.0 38.0 41.0 35.0 41.0 15 38.762192291294944 40.0 38.0 41.0 35.0 41.0 16 38.80892453932513 40.0 38.0 41.0 35.0 41.0 17 38.76170174690647 40.0 38.0 41.0 35.0 41.0 18 38.70370908401888 40.0 38.0 41.0 35.0 41.0 19 38.711095671945806 40.0 38.0 41.0 35.0 41.0 20 38.6660992773418 40.0 38.0 41.0 35.0 41.0 21 38.588095350881346 40.0 38.0 41.0 35.0 41.0 22 38.572081076671246 40.0 38.0 41.0 35.0 41.0 23 38.52633307542909 40.0 38.0 41.0 34.0 41.0 24 38.49616775354882 40.0 38.0 41.0 34.0 41.0 25 38.412664677119686 40.0 38.0 41.0 34.0 41.0 26 38.322605569678885 40.0 37.0 41.0 34.0 41.0 27 38.283604132783836 40.0 37.0 41.0 34.0 41.0 28 38.20823504023832 40.0 37.0 41.0 34.0 41.0 29 38.193321859226394 40.0 37.0 41.0 34.0 41.0 30 38.13757770023106 40.0 37.0 41.0 34.0 41.0 31 38.0891832857 40.0 37.0 41.0 34.0 41.0 32 37.993973462180186 40.0 37.0 41.0 34.0 41.0 33 37.92114446321707 40.0 37.0 41.0 34.0 41.0 34 37.88054717805393 40.0 37.0 41.0 33.0 41.0 35 37.81040143584237 40.0 37.0 41.0 33.0 41.0 36 37.69048543893722 40.0 36.0 41.0 33.0 41.0 37 37.64802176922308 40.0 36.0 41.0 33.0 41.0 38 37.6090624391425 40.0 36.0 41.0 33.0 41.0 39 37.575149610775135 40.0 36.0 41.0 33.0 41.0 40 37.473357439484616 40.0 36.0 41.0 33.0 41.0 41 37.3331891174938 40.0 35.0 41.0 33.0 41.0 42 37.2638876169122 39.0 35.0 41.0 33.0 41.0 43 37.179637144526374 39.0 35.0 41.0 32.0 41.0 44 37.08521787644808 39.0 35.0 41.0 32.0 41.0 45 37.09025911480949 39.0 35.0 41.0 32.0 41.0 46 36.98944382161448 39.0 35.0 41.0 32.0 41.0 47 36.89897733074376 39.0 35.0 41.0 32.0 41.0 48 36.826276757564756 39.0 35.0 41.0 32.0 41.0 49 36.78061612796261 39.0 35.0 41.0 32.0 41.0 50 36.69288026400972 39.0 35.0 41.0 31.0 41.0 51 35.71830014790019 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 17.0 10 24.0 11 26.0 12 14.0 13 22.0 14 15.0 15 35.0 16 50.0 17 80.0 18 136.0 19 263.0 20 492.0 21 737.0 22 1051.0 23 1555.0 24 2206.0 25 3261.0 26 4707.0 27 5915.0 28 6809.0 29 8321.0 30 10555.0 31 13273.0 32 17463.0 33 25384.0 34 50093.0 35 67403.0 36 64069.0 37 103532.0 38 200544.0 39 361689.0 40 218.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.396440921507637 4.60448542841052 55.06423920881296 16.93483444126889 2 19.727884711542004 4.530798503102746 54.02704310158796 21.714273683767296 3 21.048459680093476 4.690172795839847 51.60716447448064 22.654203049586037 4 19.3254488323254 4.792071286836883 51.28831062197028 24.59416925886743 5 19.208181354049884 6.108119772833736 49.81509845099556 24.868600422120814 6 22.19850205007553 6.521082355665735 52.471091040196214 18.809324554062517 7 85.56978414994236 2.4568273567973553 7.917344323211909 4.05604417004837 8 87.55343617922765 2.8607369745201137 5.721052880895612 3.864773965356618 9 82.02607464485534 5.295984588905907 7.772286347391747 4.90565441884701 10 39.749464453953564 28.320201270573126 16.390498597316743 15.539835678156564 11 29.265078187091103 26.95109819835468 24.742279978736057 19.04154363581816 12 27.862500197375695 22.899791044933234 28.3234645486939 20.914244208997175 13 25.076081750380276 21.685114714752647 30.369118862273876 22.869684672593202 14 21.168779902417455 24.89375924376161 30.589863837088732 23.3475970167322 15 20.08810850926087 25.824635644471112 32.61635955008869 21.470896296179333 16 22.48293358176354 24.785544730595337 31.11504108046086 21.616480607180264 17 22.646097487802184 24.445111135673418 29.311606217071155 23.597185159453243 18 22.824946182227766 25.54473059533772 29.308132404878073 22.322190817556436 19 24.532588042717364 26.621717642228926 27.82228818956488 21.023406125488833 20 27.41300995299827 25.752527724705647 27.757970030474805 19.07649229182128 21 26.795408251882964 25.67926186754249 27.43637923502445 20.0889506455501 22 24.634381266678247 24.25710420910244 28.003136957677388 23.105377566541925 23 24.6344865337144 25.25566731405894 27.70017842762628 22.40966772460038 24 23.97772549514982 23.581289836993992 29.083282015653207 23.357702652202974 25 23.21380261378051 25.623365071344733 27.01036353970936 24.1524687751654 26 22.942529461611745 27.078260778028664 27.54164627117841 22.43756348918118 27 22.498092034969712 26.938571421052355 28.603790665971907 21.959545878006033 28 21.479949261288574 26.527503644871125 29.27802603253804 22.71452106130226 29 22.688730637444536 25.09071386840568 28.930750080266115 23.28980541388367 30 23.356334180732972 25.517045364829233 28.102298505734424 23.024321948703374 31 23.890669656250495 26.21549214971078 26.68035138136668 23.213486812672045 32 24.575642260504335 26.894464532903843 26.55382040390962 21.976072802682204 33 24.34868653055639 26.394551378208668 26.76824935655524 22.4885127346797 34 23.990673340596757 26.010642497355164 27.4245893269752 22.574094835072874 35 23.44581116146384 24.984604695962485 27.48448627054681 24.085097872026864 36 23.204960182743577 27.864395004026466 27.065523466654035 21.86512134657593 37 23.815508992436563 26.648771270520495 28.110930402699047 21.424789334343895 38 22.761996494607693 26.302863789718568 27.410273010058265 23.52486670561547 39 23.109482980951928 25.908112404141203 27.47732811208834 23.505076502818525 40 24.100466859305342 25.322511882016705 28.81821961861753 21.758801640060422 41 21.8683846246967 25.88432205397041 29.194759806940258 23.052533514392636 42 22.792734469164653 25.634944445321672 28.086718984383634 23.48560210113004 43 22.876421762907054 25.740316748511788 27.68417783813088 23.69908365045028 44 22.78999752622465 24.837546646455397 27.818077508118723 24.554378319201234 45 23.516129541614692 24.51574531693273 26.56076802829578 25.407357113156802 46 22.811787802708523 25.563573394809282 27.5652260872769 24.059412715205298 47 21.982388824851444 25.14945287457959 29.824993552394037 23.04316474817493 48 22.16881674588011 23.72645307985031 29.887311637797183 24.217418536472398 49 22.735890269641512 24.373845352197186 29.22760312222029 23.66266125594101 50 22.124920391803908 24.682698836272916 28.078087087419014 25.11429368450417 51 21.368997805182296 24.227839973051637 27.837867710915663 26.5652945108504 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 138.0 1 590.0 2 1042.0 3 1999.5 4 2957.0 5 2105.0 6 1253.0 7 1326.0 8 1399.0 9 1393.5 10 1388.0 11 1376.0 12 1364.0 13 1336.5 14 1309.0 15 1380.0 16 1451.0 17 1447.5 18 1444.0 19 1613.0 20 1782.0 21 2151.0 22 2520.0 23 3240.5 24 3961.0 25 4689.0 26 7161.0 27 8905.0 28 10800.5 29 12696.0 30 14515.0 31 16334.0 32 18419.0 33 20504.0 34 24011.5 35 27519.0 36 30019.0 37 32519.0 38 35043.0 39 37567.0 40 41232.5 41 44898.0 42 48454.0 43 52010.0 44 56657.5 45 61305.0 46 67706.0 47 74107.0 48 81132.5 49 88158.0 50 87519.5 51 86881.0 52 79379.0 53 71877.0 54 64780.0 55 57683.0 56 53974.5 57 50266.0 58 49215.0 59 48164.0 60 44143.0 61 40122.0 62 35917.0 63 31712.0 64 26697.5 65 21683.0 66 17578.5 67 13474.0 68 11177.5 69 8881.0 70 7564.5 71 6248.0 72 5213.5 73 4179.0 74 3079.5 75 1607.0 76 1234.0 77 1106.5 78 979.0 79 647.0 80 315.0 81 247.0 82 179.0 83 136.0 84 93.0 85 62.5 86 32.0 87 29.5 88 27.0 89 17.0 90 7.0 91 3.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 949965.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.83345963261455 #Duplication Level Percentage of deduplicated Percentage of total 1 71.76721740718742 20.692971660552107 2 10.300636949460975 5.940059993450018 3 3.6172007416136536 3.1288923469914214 4 1.802574316492905 2.0789781515754373 5 1.176725378177848 1.6964531845182034 6 0.8295218494831419 1.4350790856866362 7 0.6563779207796495 1.3247952397777647 8 0.5731092285293298 1.3219777444703438 9 0.4989713170576485 1.29483623953928 >10 8.586437737305683 55.537409543480955 >50 0.15689487126092042 2.8527752428429176 >100 0.031378968014272 1.537673381447625 >500 0.001107492988738956 0.18159149859819804 >1k 0.0018458216478982599 0.9765066870690907 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 2670 0.2810629865310827 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGCT 2159 0.22727153105640735 TruSeq Adapter, Index 14 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1574 0.16569031490633865 TruSeq Adapter, Index 15 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1432 0.15074239577247583 No Hit TCTGTCTCTTATACACATCTGACGCGTGCAGTATCGTATGCCGTCTTCTGC 1339 0.14095256141015722 TruSeq Adapter, Index 15 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0526703615396356E-4 0.0 0.0 0.24137731390103845 0.0 2 1.0526703615396356E-4 0.0 0.0 0.878453416704826 0.0 3 1.0526703615396356E-4 0.0 0.0 1.2462564410267747 0.0 4 1.0526703615396356E-4 0.0 0.0 1.6611138305095452 0.0 5 1.0526703615396356E-4 0.0 0.0 2.333349123388756 0.0 6 1.0526703615396356E-4 0.0 0.0 2.854420952350876 0.0 7 1.0526703615396356E-4 0.0 0.0 3.322332928055244 0.0 8 1.0526703615396356E-4 0.0 0.0 4.069413083639923 0.0 9 1.0526703615396356E-4 0.0 0.0 4.453532498565736 0.0 10 1.0526703615396356E-4 0.0 0.0 5.124820388119562 0.0 11 2.1053407230792713E-4 0.0 0.0 6.389288026400973 0.0 12 2.1053407230792713E-4 0.0 0.0 7.58354255156769 0.0 13 2.1053407230792713E-4 0.0 0.0 7.937029258972699 0.0 14 2.1053407230792713E-4 0.0 0.0 8.069981525635155 0.0 15 2.1053407230792713E-4 0.0 0.0 8.272410036159227 0.0 16 2.1053407230792713E-4 0.0 0.0 8.757480538756692 0.0 17 2.1053407230792713E-4 0.0 0.0 9.351081355628892 0.0 18 2.1053407230792713E-4 0.0 0.0 9.996894622433459 0.0 19 2.1053407230792713E-4 0.0 0.0 10.517966451395578 0.0 20 2.1053407230792713E-4 0.0 0.0 11.062618096456186 0.0 21 2.1053407230792713E-4 0.0 0.0 11.86054223050323 0.0 22 2.1053407230792713E-4 0.0 0.0 12.716994836651876 0.0 23 2.1053407230792713E-4 0.0 0.0 13.490918086455817 0.0 24 2.1053407230792713E-4 0.0 0.0 14.075571205254931 0.0 25 2.1053407230792713E-4 0.0 0.0 14.583589921733958 0.0 26 2.1053407230792713E-4 0.0 0.0 15.037711915702157 0.0 27 2.1053407230792713E-4 0.0 0.0 15.463411809908786 0.0 28 2.1053407230792713E-4 0.0 0.0 15.925849899733148 0.0 29 2.1053407230792713E-4 0.0 0.0 16.425341986283705 0.0 30 2.1053407230792713E-4 0.0 0.0 16.97862552830894 0.0 31 2.1053407230792713E-4 0.0 0.0 17.525382514092623 0.0 32 2.1053407230792713E-4 0.0 0.0 18.056770512597833 0.0 33 2.1053407230792713E-4 0.0 0.0 18.55573626396762 0.0 34 2.1053407230792713E-4 0.0 0.0 19.057754759385872 0.0 35 2.1053407230792713E-4 0.0 0.0 19.546614875284877 0.0 36 2.1053407230792713E-4 0.0 0.0 20.069160442753155 0.0 37 3.158011084618907E-4 0.0 0.0 20.59117967504066 0.0 38 3.158011084618907E-4 0.0 0.0 21.092250767133525 0.0 39 4.2106814461585426E-4 0.0 0.0 21.615954271999495 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTTG 20 7.0326694E-4 45.0 1 TCGTTTG 420 0.0 42.32143 1 TTTTGCG 710 0.0 40.880283 1 CGGGCGA 300 0.0 40.500004 6 TATTGCG 45 1.927765E-8 40.0 1 CGTTTGG 800 0.0 39.375 2 GGGCGAT 1535 0.0 39.136806 7 TGGGCGA 1070 0.0 39.11215 6 TTTTTCG 440 0.0 38.863636 1 CATACGA 265 0.0 38.207546 18 TTTCTCG 320 0.0 37.96875 1 TTGGGAT 2585 0.0 37.77563 5 TTGGGAC 1820 0.0 37.706043 5 TTTGGGC 2270 0.0 37.566082 4 GGTACGC 30 1.13977265E-4 37.500004 8 CAACGCG 30 1.13977265E-4 37.500004 17 AAGCGTA 30 1.13977265E-4 37.500004 25 TACGGGT 30 1.13977265E-4 37.500004 4 ATCGACG 30 1.13977265E-4 37.500004 16 GCGATGT 235 0.0 37.340427 9 >>END_MODULE