##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933868.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1020669 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.439638119703844 33.0 31.0 34.0 31.0 34.0 2 32.65666538319475 34.0 31.0 34.0 31.0 34.0 3 32.7198082826068 34.0 31.0 34.0 31.0 34.0 4 36.086036707296884 37.0 35.0 37.0 35.0 37.0 5 36.105071281678974 37.0 35.0 37.0 35.0 37.0 6 35.727118194047236 37.0 35.0 37.0 35.0 37.0 7 36.053114182952555 37.0 35.0 37.0 35.0 37.0 8 36.07046260834805 37.0 36.0 37.0 35.0 37.0 9 37.905289569880146 39.0 38.0 39.0 35.0 39.0 10 37.59528407348514 39.0 37.0 39.0 35.0 39.0 11 37.52821629735007 39.0 37.0 39.0 35.0 39.0 12 37.21194628229132 39.0 37.0 39.0 34.0 39.0 13 37.042122372679096 39.0 37.0 39.0 33.0 39.0 14 37.88624421825293 40.0 37.0 41.0 33.0 41.0 15 38.07113765579243 40.0 37.0 41.0 33.0 41.0 16 38.276970300851694 40.0 37.0 41.0 33.0 41.0 17 38.306570494450206 40.0 37.0 41.0 34.0 41.0 18 38.287141080996875 40.0 37.0 41.0 34.0 41.0 19 38.2938533452079 40.0 37.0 41.0 34.0 41.0 20 38.19772227823124 40.0 37.0 41.0 34.0 41.0 21 38.11844976187187 40.0 36.0 41.0 34.0 41.0 22 38.17688692416444 40.0 36.0 41.0 34.0 41.0 23 38.157158687096405 40.0 36.0 41.0 34.0 41.0 24 38.12028679229015 40.0 36.0 41.0 34.0 41.0 25 38.020320005800116 40.0 36.0 41.0 34.0 41.0 26 37.944504045875796 40.0 36.0 41.0 34.0 41.0 27 37.94064383262351 40.0 36.0 41.0 34.0 41.0 28 37.86312898696835 40.0 36.0 41.0 34.0 41.0 29 37.820862591104465 40.0 36.0 41.0 34.0 41.0 30 37.74864231205219 40.0 36.0 41.0 34.0 41.0 31 37.629493988746596 40.0 35.0 41.0 33.0 41.0 32 37.562923925386194 40.0 35.0 41.0 33.0 41.0 33 37.52486947286535 40.0 35.0 41.0 33.0 41.0 34 37.444358553066664 40.0 35.0 41.0 33.0 41.0 35 37.376616709236785 40.0 35.0 41.0 33.0 41.0 36 37.320540743375176 40.0 35.0 41.0 32.0 41.0 37 37.23641552746287 40.0 35.0 41.0 32.0 41.0 38 37.18195712811891 39.0 35.0 41.0 32.0 41.0 39 37.147041793176825 39.0 35.0 41.0 32.0 41.0 40 37.032300383376004 39.0 35.0 41.0 32.0 41.0 41 36.877114911886224 39.0 35.0 41.0 32.0 41.0 42 36.87853750824214 39.0 35.0 41.0 31.0 41.0 43 36.81727572797841 39.0 35.0 41.0 32.0 41.0 44 36.72831740750429 39.0 35.0 41.0 31.0 41.0 45 36.76163575066941 39.0 35.0 41.0 32.0 41.0 46 36.714877203089344 39.0 35.0 41.0 32.0 41.0 47 36.64233752568168 39.0 35.0 41.0 31.0 41.0 48 36.57508163763179 39.0 35.0 41.0 31.0 41.0 49 36.573901039416306 39.0 35.0 41.0 31.0 41.0 50 36.49020593355927 39.0 35.0 41.0 31.0 41.0 51 35.53234202273215 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 12.0 10 18.0 11 20.0 12 11.0 13 7.0 14 23.0 15 38.0 16 67.0 17 114.0 18 200.0 19 332.0 20 614.0 21 960.0 22 1396.0 23 2063.0 24 2952.0 25 4280.0 26 5926.0 27 7341.0 28 8779.0 29 10479.0 30 12749.0 31 17144.0 32 23668.0 33 36963.0 34 75894.0 35 74937.0 36 68657.0 37 108128.0 38 207071.0 39 349612.0 40 208.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.64403249241429 4.459232131082653 55.55268162352339 15.344053752979663 2 20.77901846729939 4.376639243476582 52.43952740800396 22.404814881220062 3 21.297893832378566 4.602177591364096 50.83989030723966 23.260038269017674 4 19.72196667087959 4.9604720041463 50.13172732786045 25.18583399711366 5 19.292150540478843 5.90671412573518 49.615007411805394 25.186127921980585 6 21.84674953388415 6.806908018172394 52.85552906965921 18.490813378284244 7 83.12959441307612 2.5335343779423103 9.382963526863264 4.953907682118297 8 84.79644233341074 2.97148242966133 7.420231240490306 4.811843996437631 9 78.67663267915455 5.424873293888616 10.134823336458734 5.7636706904980946 10 41.58635169677927 25.853533319812787 18.03356426030378 14.526550723104158 11 33.136305697537594 22.921828722142045 25.593703737450635 18.348161842869725 12 29.883439195272903 20.66487764397665 29.12766038745176 20.32402277329869 13 27.917963610141978 20.941264993842275 31.70910451870293 19.43166687731282 14 21.268795270552943 22.714219791136987 34.88329713158723 21.133687806722847 15 19.68414833800184 22.8467799061204 37.17385361953777 20.295218136339987 16 25.69177666804811 22.35896260197968 30.75864947402145 21.190611255950753 17 25.62652534759065 23.038516894311474 28.634454460750742 22.700503297347133 18 26.019110994847498 22.442829164009094 30.73082458661917 20.80723525452424 19 25.996380805138593 24.79687342321556 28.274984348500837 20.931761423145016 20 24.511668327342164 28.915054733708967 27.8395836456285 18.73369329332036 21 24.0370776422131 26.22289890258252 31.29721780518464 18.442805650019743 22 22.410105528824722 23.399064731073445 32.1296130283177 22.061216711784134 23 21.131434382743084 24.64138716861196 31.72634811089589 22.500830337749065 24 22.611835962491266 26.064865299132233 28.805028858523187 22.51826987985331 25 24.192367946905414 25.129106497797032 26.31078243779325 24.367743117504304 26 20.40994680939658 25.166630905807857 27.97684655848272 26.446575726312837 27 20.21105764944365 23.75108874669457 31.752213499185338 24.285640104676443 28 18.823634302599572 24.875939212418523 29.268254448797798 27.03217203618411 29 20.504590616546597 26.595301708977154 27.842620869253405 25.05748680522285 30 24.001904633137677 23.5970721164256 29.23268953989981 23.168333710536913 31 22.835414811265945 24.544293987570896 29.355942034097243 23.264349167065916 32 24.357553722117554 25.142235141853043 26.197327439160002 24.302883696869408 33 24.247625821887407 23.78880910461668 26.63694106512493 25.326624008370977 34 19.670627794123266 24.13044777493977 30.671941638278422 25.526982792658544 35 19.017820664681693 27.272308652462257 27.680864217488725 26.02900646536732 36 21.639336552790375 26.190959067043284 26.997586876842544 25.172117503323797 37 19.472914333638037 27.898172669102323 28.2934036401615 24.33550935709814 38 21.38176039440798 27.432889604759232 26.476262137872318 24.70908786296047 39 20.20576700183899 25.132535621244497 26.933217330985855 27.72848004593066 40 22.507100734910143 23.317941467802 29.280403343297383 24.894554453990473 41 19.559622169381065 24.15543138862844 28.27400459894442 28.010941843046083 42 19.47154268425905 24.023263173467598 29.616261491237612 26.88893265103574 43 19.96474861096007 22.865885022470557 30.252608828131354 26.916757538438024 44 20.89844993822679 22.839137859580333 28.537361279709682 27.725050922483195 45 20.124251838744982 22.502397937039333 27.26486255583348 30.108487668382207 46 20.12062676538623 23.31480626922146 29.382003372297973 27.182563593094333 47 17.503715700192718 24.811569666561834 31.962369779037083 25.722344854208366 48 18.604758251695703 25.893801026581585 29.559142092098416 25.942298629624293 49 21.536168924499517 22.685807054000858 30.108389693426567 25.66963432807306 50 19.680523264643092 23.6132379841065 28.57625733709949 28.12998141415092 51 18.442511725152816 23.7399196017514 27.588865734141038 30.228702938954743 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 105.0 1 543.5 2 982.0 3 2294.0 4 3606.0 5 2482.0 6 1358.0 7 1387.0 8 1416.0 9 1480.0 10 1544.0 11 1549.0 12 1554.0 13 1543.5 14 1533.0 15 1502.5 16 1472.0 17 1571.0 18 1670.0 19 1775.0 20 1880.0 21 2072.5 22 2265.0 23 2997.0 24 3729.0 25 4643.0 26 7242.5 27 8928.0 28 10111.0 29 11294.0 30 13226.5 31 15159.0 32 18428.5 33 21698.0 34 23453.0 35 25208.0 36 27818.5 37 30429.0 38 33581.0 39 36733.0 40 40477.5 41 44222.0 42 49330.0 43 54438.0 44 59698.5 45 64959.0 46 75060.5 47 85162.0 48 98893.0 49 112624.0 50 111721.0 51 110818.0 52 96683.5 53 82549.0 54 74635.5 55 66722.0 56 61204.0 57 55686.0 58 51619.0 59 47552.0 60 41191.0 61 34830.0 62 30953.0 63 27076.0 64 22261.5 65 17447.0 66 15249.0 67 13051.0 68 10796.0 69 8541.0 70 7576.0 71 6611.0 72 5686.5 73 4762.0 74 3710.5 75 2037.5 76 1416.0 77 1121.5 78 827.0 79 571.0 80 315.0 81 223.5 82 132.0 83 109.0 84 86.0 85 49.0 86 12.0 87 27.0 88 42.0 89 24.5 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1020669.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.665337675009198 #Duplication Level Percentage of deduplicated Percentage of total 1 71.40841306723327 21.897630995432475 2 11.251151162747945 6.900406992764763 3 4.211396150631487 3.874316551270454 4 2.0899321995476825 2.563539064680176 5 1.2727431041659278 1.9514548531393794 6 0.9237634357782828 1.6996510613980629 7 0.6975522567978547 1.4973472850469662 8 0.5389653640261503 1.3222043906396923 9 0.4781280640841033 1.3195762683333718 >10 6.875788388029032 47.73400113323941 >50 0.18492242962334504 3.594058327061462 >100 0.06271831347586437 3.4076723541354874 >500 0.0019397416538861174 0.44711262668721785 >1k 0.0025863222051814897 1.791028096171015 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 3216 0.3150874573441537 TruSeq Adapter, Index 23 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 3063 0.30009728913095235 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGCT 3063 0.30009728913095235 TruSeq Adapter, Index 20 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTGC 2752 0.2696270779263405 TruSeq Adapter, Index 23 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2021 0.19800738535215626 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1539 0.15078345673278998 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1208 0.11835374641534131 No Hit TCCTGTCTCTTATACACATCTGACGCCTCACTACTCGTATGCCGTCTTCTG 1204 0.11796184659277396 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.939248669255165E-4 0.0 0.0 0.3145975825659445 0.0 2 2.939248669255165E-4 0.0 0.0 1.2686777006061711 0.0 3 2.939248669255165E-4 0.0 0.0 1.860838332505445 0.0 4 2.939248669255165E-4 0.0 0.0 2.4867023491455114 0.0 5 2.939248669255165E-4 0.0 0.0 3.567758009697561 0.0 6 2.939248669255165E-4 0.0 0.0 4.480492696456932 0.0 7 2.939248669255165E-4 0.0 0.0 5.286140756699773 0.0 8 2.939248669255165E-4 0.0 0.0 6.641820217915896 0.0 9 2.939248669255165E-4 0.0 0.0 7.45618804921086 0.0 10 2.939248669255165E-4 0.0 0.0 8.686067667382863 0.0 11 2.939248669255165E-4 0.0 0.0 10.519081112486026 0.0 12 2.939248669255165E-4 0.0 0.0 12.056308166506478 0.0 13 2.939248669255165E-4 0.0 0.0 12.603400318810506 0.0 14 2.939248669255165E-4 0.0 0.0 12.84872960773767 0.0 15 2.939248669255165E-4 0.0 0.0 13.149512721558116 0.0 16 2.939248669255165E-4 0.0 0.0 13.755389847247246 0.0 17 2.939248669255165E-4 0.0 0.0 14.54790926343408 0.0 18 2.939248669255165E-4 0.0 0.0 15.404308350699393 0.0 19 2.939248669255165E-4 0.0 0.0 15.999506206223565 0.0 20 2.939248669255165E-4 0.0 0.0 16.71227400851794 0.0 21 2.939248669255165E-4 0.0 0.0 17.610606376797964 0.0 22 2.939248669255165E-4 0.0 0.0 18.601819003026446 0.0 23 2.939248669255165E-4 0.0 0.0 19.533952731002902 0.0 24 2.939248669255165E-4 0.0 0.0 20.20517915210514 0.0 25 2.939248669255165E-4 0.0 0.0 20.81742464991099 0.0 26 2.939248669255165E-4 0.0 0.0 21.38587534254494 0.0 27 3.9189982256735534E-4 0.0 0.0 22.002627688310316 0.0 28 3.9189982256735534E-4 0.0 0.0 22.591555146673407 0.0 29 3.9189982256735534E-4 0.0 0.0 23.275126412186516 0.0 30 3.9189982256735534E-4 0.0 0.0 24.07607167455855 0.0 31 3.9189982256735534E-4 0.0 0.0 24.687925272541833 0.0 32 3.9189982256735534E-4 0.0 0.0 25.28880567549323 0.0 33 3.9189982256735534E-4 0.0 0.0 25.87959465801352 0.0 34 3.9189982256735534E-4 0.0 0.0 26.58354471430013 0.0 35 3.9189982256735534E-4 0.0 0.0 27.281126398470022 0.0 36 3.9189982256735534E-4 0.0 0.0 27.88151692664321 0.0 37 3.9189982256735534E-4 0.0 0.0 28.510026267085607 0.0 38 3.9189982256735534E-4 0.0 0.0 29.322826499090304 0.0 39 3.9189982256735534E-4 0.0 0.0 30.90139898439161 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGAT 25 3.8904975E-5 45.0 8 ACCGATA 20 7.032917E-4 45.0 10 GCGATCG 20 7.032917E-4 45.0 9 AACCCGA 55 6.184564E-11 40.909092 24 CATACGA 140 0.0 38.57143 18 TCTTGCG 205 0.0 38.414635 1 TACGGGA 130 0.0 38.07692 4 GTTTGCG 225 0.0 38.0 1 TTGGGCG 925 0.0 37.945946 5 TTATGGG 640 0.0 37.617188 3 TTTGGGC 2125 0.0 37.588234 4 GAATGCG 30 1.13983246E-4 37.499996 41 CCGATCA 30 1.13983246E-4 37.499996 10 CGAATAT 60 1.546141E-10 37.499996 14 TTACGCG 30 1.13983246E-4 37.499996 1 GACCGAT 465 0.0 37.258064 9 CGGGATA 260 0.0 37.211536 6 TGGGCGA 1205 0.0 37.157677 6 TTTGGGA 4580 0.0 36.94323 4 TTTCGCG 295 0.0 36.61017 1 >>END_MODULE