SRR2933866.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933866.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1435216
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15025	1.0468807482636762	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC	4755	0.33130901550707353	No Hit
CCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	4269	0.2974465167612401	No Hit
CTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGCT	3986	0.27772823045451	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG	3761	0.2620511477018093	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTT	3538	0.24651341679579938	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC	3489	0.2430992965518779	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC	3033	0.2113270755064046	No Hit
GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	2911	0.2028266128582736	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG	2863	0.19948216853769746	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCT	2703	0.18833402080244366	No Hit
TCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC	2212	0.15412314243988362	No Hit
CGTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCT	1806	0.12583471756167713	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	8220	0.0	44.041973	1
GTACGGG	180	0.0	41.250004	3
TACGGGA	160	0.0	39.375004	4
TTTCGCG	450	0.0	39.0	1
TGGGACG	365	0.0	38.219177	6
TTGGGAC	3000	0.0	38.025	5
TGGGCGA	1435	0.0	37.787457	6
CGTTCTG	490	0.0	37.65306	1
GTTTTTT	9780	0.0	37.638035	2
CGTTGAT	30	1.14006325E-4	37.500004	25
GCGATGT	300	0.0	37.500004	9
TAAGCGC	30	1.14006325E-4	37.500004	32
TTTGGGA	7490	0.0	37.429905	4
TTACGGG	295	0.0	37.372883	3
TTTGGGC	2900	0.0	37.318966	4
TGGGACT	1965	0.0	37.213737	6
TCGTTTG	375	0.0	37.2	1
TTGTTCG	375	0.0	37.2	1
TACGGGG	310	0.0	37.016132	4
TTGGGAT	4525	0.0	36.745857	5