##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933866.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1435216 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.396643432068764 33.0 31.0 34.0 31.0 34.0 2 32.64811916812521 34.0 31.0 34.0 31.0 34.0 3 32.63608683292271 34.0 31.0 34.0 31.0 34.0 4 36.07191391400319 37.0 35.0 37.0 35.0 37.0 5 36.1141382203097 37.0 35.0 37.0 35.0 37.0 6 35.75117403930837 37.0 35.0 37.0 35.0 37.0 7 36.063285247656104 37.0 35.0 37.0 35.0 37.0 8 36.064011967536594 37.0 36.0 37.0 35.0 37.0 9 37.94234317343174 39.0 38.0 39.0 35.0 39.0 10 37.651232288380285 39.0 37.0 39.0 35.0 39.0 11 37.555351947024 39.0 37.0 39.0 35.0 39.0 12 37.32519913378892 39.0 37.0 39.0 35.0 39.0 13 37.231400709022196 39.0 37.0 39.0 34.0 39.0 14 38.22359561208905 40.0 38.0 41.0 33.0 41.0 15 38.35420661419605 40.0 38.0 41.0 33.0 41.0 16 38.513708041158964 40.0 38.0 41.0 34.0 41.0 17 38.51725384889801 40.0 38.0 41.0 34.0 41.0 18 38.392084536404276 40.0 38.0 41.0 34.0 41.0 19 38.318345809968676 40.0 37.0 41.0 34.0 41.0 20 38.15093198515067 40.0 36.0 41.0 34.0 41.0 21 38.07558235136732 40.0 36.0 41.0 34.0 41.0 22 38.12972820815821 40.0 36.0 41.0 34.0 41.0 23 38.080692383585465 40.0 36.0 41.0 34.0 41.0 24 38.04382058171035 40.0 36.0 41.0 34.0 41.0 25 37.950525217110176 40.0 35.0 41.0 34.0 41.0 26 37.88316741173454 40.0 35.0 41.0 34.0 41.0 27 37.85670240577028 40.0 35.0 41.0 34.0 41.0 28 37.75919443484465 40.0 35.0 41.0 34.0 41.0 29 37.70865082329071 40.0 35.0 41.0 34.0 41.0 30 37.604782834082116 40.0 35.0 41.0 33.0 41.0 31 37.41624884337967 40.0 35.0 41.0 33.0 41.0 32 37.20364321467988 40.0 35.0 41.0 32.0 41.0 33 36.97404362827616 39.0 35.0 41.0 32.0 41.0 34 36.74899945374076 39.0 35.0 41.0 31.0 41.0 35 36.59863811440229 39.0 35.0 41.0 31.0 41.0 36 36.442638599346715 39.0 35.0 41.0 30.0 41.0 37 36.31882309004359 39.0 35.0 41.0 30.0 41.0 38 36.249280944471074 39.0 35.0 41.0 30.0 41.0 39 36.19975251112028 39.0 35.0 41.0 30.0 41.0 40 36.0731304556248 39.0 35.0 41.0 29.0 41.0 41 35.902381941115486 39.0 35.0 41.0 29.0 41.0 42 35.85045874627931 39.0 35.0 41.0 29.0 41.0 43 35.779932776669156 39.0 35.0 41.0 28.0 41.0 44 35.69894845096487 39.0 35.0 41.0 28.0 41.0 45 35.73062939655076 39.0 35.0 41.0 28.0 41.0 46 35.664251234657364 38.0 35.0 41.0 28.0 41.0 47 35.55288890313374 38.0 35.0 40.0 28.0 41.0 48 35.451557117534925 38.0 35.0 40.0 27.0 41.0 49 35.43503277555434 38.0 35.0 40.0 27.0 41.0 50 35.347512151481034 38.0 35.0 40.0 27.0 41.0 51 34.38899440920391 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 26.0 10 40.0 11 21.0 12 13.0 13 25.0 14 19.0 15 51.0 16 99.0 17 190.0 18 323.0 19 594.0 20 1113.0 21 1785.0 22 2799.0 23 4563.0 24 7356.0 25 12390.0 26 17770.0 27 20186.0 28 19665.0 29 19502.0 30 21462.0 31 25750.0 32 33607.0 33 49535.0 34 94139.0 35 96165.0 36 100877.0 37 156180.0 38 289900.0 39 458805.0 40 263.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.11324567173164 4.611988718074492 52.16629413272985 20.10847147746402 2 24.237884750448714 5.489696324455692 49.55010256295916 20.722316362136432 3 18.91150879031449 5.692383585467275 53.546574174200956 21.84953345001728 4 17.567460228982952 4.487199139362994 54.283188035807854 23.6621525958462 5 18.435622233865843 5.255515546092017 52.34445546872387 23.96440675131827 6 20.908281401545135 6.740866879967894 54.34039196887437 18.0104597496126 7 78.8716820325303 2.012031638443273 14.241340676246642 4.8749456527797905 8 80.29321022062184 3.267034369739468 11.898278725989677 4.5414766836490115 9 75.06744629379828 4.483645667272382 13.870455736279416 6.578452302649914 10 39.24301289840693 26.71716313084581 20.284333507987647 13.755490462759612 11 29.35586002385704 22.00128761106342 30.185630594976644 18.457221770102898 12 26.126520328647395 19.977132361958063 33.29429159095216 20.60205571844238 13 25.142278235471178 19.560540016276295 36.06725398824985 19.229927760002678 14 19.97971037112184 22.12621654162161 37.29459537797795 20.599477709278606 15 17.61233152361735 22.200003344444323 39.288371924504744 20.899293207433583 16 22.9943785465045 23.32345793246452 33.16065316997581 20.521510351055174 17 23.94357365023801 23.47151926957336 31.62680739345158 20.958099686737047 18 23.779277822989712 22.751697305492694 32.75994693481678 20.70907793670082 19 23.702843335079876 24.57344399727985 31.040623850347266 20.683088817293008 20 22.596738051972665 27.934331835765487 30.697539603794834 18.771390508467018 21 22.812594062496515 25.690279372582246 33.198835575969056 18.298290988952186 22 21.957809834895933 21.971326964024925 34.33894270966879 21.731920491410353 23 20.64448835575969 24.10975072741664 33.29268904471522 21.95307187210845 24 21.471402214022138 25.16269328101136 31.183180789511823 22.182723715454678 25 23.19142205772511 25.418125215995364 29.041691285492917 22.348761440786614 26 21.267391110466995 24.56738219194881 29.822270654730715 24.34295604285348 27 21.962060066219998 23.492073666960234 32.5640182383697 21.981848028450074 28 20.056702266418437 23.72911115818107 31.6242293842878 24.589957191112696 29 22.30514431277243 23.89981717037714 30.312301423618464 23.482737093231957 30 25.726580528645165 22.200212372214356 30.684440530205908 21.38876656893457 31 24.60723682010234 22.76751374009208 30.955758575712643 21.66949086409293 32 26.33443328390988 23.529280610026643 28.73741652824383 21.398869577819646 33 25.93191547474387 23.17240053065183 28.862972542112132 22.03271145249217 34 23.146063031627296 23.210164881105005 31.57880068226664 22.06497140500106 35 23.456538946054113 26.22699301011137 28.193317242840106 22.123150800994416 36 25.734105528366463 25.942924270632435 27.764531610572902 20.5584385904282 37 23.047610951940335 27.4262550027313 28.883387587652308 20.642746457676058 38 22.670246151101995 26.066041627183644 29.098964894482783 22.16474732723158 39 22.312878340263765 24.73153866735042 28.680212595177313 24.275370397208505 40 24.655800938674037 24.22506438055317 30.12982018037703 20.989314500395757 41 22.773296841729746 25.404538410943022 28.02797627674162 23.794188470585613 42 21.72822766747305 25.81959788631119 30.20451277020323 22.24766167601253 43 22.022608443607094 24.149396327800137 30.904825475747206 22.923169752845567 44 23.028798452637094 23.02886812856044 29.61024681999086 24.332086598811607 45 22.32151815475859 21.992578120645252 28.74403574096164 26.94186798363452 46 23.068583404867283 22.725638510161534 29.408813725599494 24.79696435937169 47 20.988617741162304 23.747784305637616 32.0828363117468 23.180761641453273 48 21.065888340152284 24.953177779511932 30.229665778530894 23.751268101804886 49 22.83210332103321 22.41530194758141 31.17739768787416 23.57519704351122 50 21.42855152116476 23.06593571978016 30.087526894906414 25.417985864148672 51 21.00352838875821 23.21336997357889 28.788001248592547 26.995100389070352 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 229.0 1 787.0 2 1345.0 3 12194.0 4 23043.0 5 15065.0 6 7087.0 7 7123.0 8 7159.0 9 7428.0 10 7697.0 11 7635.5 12 7574.0 13 7507.0 14 7440.0 15 7106.0 16 6772.0 17 6612.0 18 6452.0 19 6268.0 20 6084.0 21 6218.5 22 6353.0 23 6524.0 24 6695.0 25 7578.0 26 9777.0 27 11093.0 28 13241.5 29 15390.0 30 17630.0 31 19870.0 32 22643.5 33 25417.0 34 28746.5 35 32076.0 36 34772.5 37 37469.0 38 41255.0 39 45041.0 40 49820.0 41 54599.0 42 61374.0 43 68149.0 44 76387.5 45 84626.0 46 110118.5 47 135611.0 48 143628.0 49 151645.0 50 150216.0 51 148787.0 52 130868.0 53 112949.0 54 100266.0 55 87583.0 56 81404.0 57 75225.0 58 67964.5 59 60704.0 60 53880.5 61 47057.0 62 41827.5 63 36598.0 64 31676.5 65 26755.0 66 22999.0 67 19243.0 68 16320.5 69 13398.0 70 11122.0 71 8846.0 72 7595.5 73 6345.0 74 5286.0 75 3080.0 76 1933.0 77 1496.0 78 1059.0 79 899.5 80 740.0 81 495.0 82 250.0 83 154.5 84 59.0 85 59.5 86 60.0 87 38.5 88 17.0 89 10.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1435216.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.764169887038236 #Duplication Level Percentage of deduplicated Percentage of total 1 73.89089287648659 24.94864660186637 2 9.824759691779231 6.634497106651188 3 3.564730955542324 3.610805447535455 4 1.8887275624303752 2.550852731529232 5 1.2671990770837955 2.139296245967767 6 0.9567819396615076 1.9382968773348668 7 0.8132815728793257 1.9221844034886655 8 0.6620090037260614 1.7881747574844535 9 0.5987077315694752 1.8193382605255544 >10 6.356019184786943 41.88638188186817 >50 0.11704510902302495 2.640720715666221 >100 0.05296413129793836 3.131689414207115 >500 0.0029192815838772106 0.6783529963571313 >1k 0.0037533620364135563 3.252926153678105 >5k 0.0 0.0 >10k+ 2.0852011313408645E-4 1.0578364058397403 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15025 1.0468807482636762 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 4755 0.33130901550707353 No Hit CCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 4269 0.2974465167612401 No Hit CTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGCT 3986 0.27772823045451 No Hit CGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTG 3761 0.2620511477018093 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTT 3538 0.24651341679579938 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTC 3489 0.2430992965518779 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGC 3033 0.2113270755064046 No Hit GCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 2911 0.2028266128582736 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCG 2863 0.19948216853769746 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCT 2703 0.18833402080244366 No Hit TCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCTGC 2212 0.15412314243988362 No Hit CGTCTGTCTCTTATACACATCTGACGCGGTCTGAATCGTATGCCGTCTTCT 1806 0.12583471756167713 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.967592334533617E-5 0.0 0.0 0.29222082251033993 0.0 2 6.967592334533617E-5 0.0 0.0 0.9957386205281993 0.0 3 6.967592334533617E-5 0.0 0.0 1.6060997090333442 0.0 4 6.967592334533617E-5 0.0 0.0 2.2991661185494032 0.0 5 6.967592334533617E-5 0.0 0.0 3.771488054759702 0.0 6 6.967592334533617E-5 0.0 0.0 5.117766245638287 0.0 7 6.967592334533617E-5 0.0 0.0 6.288182405993244 0.0 8 6.967592334533617E-5 0.0 0.0 7.844533505758018 0.0 9 6.967592334533617E-5 0.0 0.0 8.907230688621086 0.0 10 6.967592334533617E-5 0.0 0.0 10.374466282427175 0.0 11 6.967592334533617E-5 0.0 0.0 12.097342838987302 0.0 12 6.967592334533617E-5 0.0 0.0 13.730198102585256 0.0 13 1.3935184669067234E-4 0.0 0.0 14.297917526003054 0.0 14 1.3935184669067234E-4 0.0 0.0 14.620168671475234 0.0 15 1.3935184669067234E-4 0.0 0.0 14.930226530361981 0.0 16 1.3935184669067234E-4 0.0 0.0 15.404162160956957 0.0 17 1.3935184669067234E-4 0.0 0.0 16.026716536047537 0.0 18 1.3935184669067234E-4 0.0 0.0 16.67964961371668 0.0 19 1.3935184669067234E-4 0.0 0.0 17.246114870514266 0.0 20 1.3935184669067234E-4 0.0 0.0 17.82477341389728 0.0 21 1.3935184669067234E-4 0.0 0.0 18.59566782979008 0.0 22 1.3935184669067234E-4 0.0 0.0 19.47086710293085 0.0 23 1.3935184669067234E-4 0.0 0.0 20.226920547151092 0.0 24 1.3935184669067234E-4 0.0 0.0 20.819165895586448 0.0 25 1.3935184669067234E-4 0.0 0.0 21.36026911628633 0.0 26 1.3935184669067234E-4 0.0 0.0 21.843889700226306 0.0 27 1.3935184669067234E-4 0.0 0.0 22.40004292036878 0.0 28 1.3935184669067234E-4 0.0 0.0 22.90874683671308 0.0 29 1.3935184669067234E-4 0.0 0.0 23.488520194869622 0.0 30 1.3935184669067234E-4 0.0 0.0 24.158384521911685 0.0 31 1.3935184669067234E-4 0.0 0.0 24.712795843970525 0.0 32 1.3935184669067234E-4 0.0 0.0 25.25564096275404 0.0 33 2.787036933813447E-4 0.0 0.0 25.7753536749869 0.0 34 2.787036933813447E-4 0.0 0.0 26.33694161715031 0.0 35 2.787036933813447E-4 0.0 0.0 26.95287677952308 0.0 36 2.787036933813447E-4 0.0 0.0 27.47579458422983 0.0 37 2.787036933813447E-4 0.0 0.0 28.055985997926445 0.0 38 2.787036933813447E-4 0.0 0.0 28.74898273151916 0.0 39 2.787036933813447E-4 0.0 0.0 30.042585924348668 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 8220 0.0 44.041973 1 GTACGGG 180 0.0 41.250004 3 TACGGGA 160 0.0 39.375004 4 TTTCGCG 450 0.0 39.0 1 TGGGACG 365 0.0 38.219177 6 TTGGGAC 3000 0.0 38.025 5 TGGGCGA 1435 0.0 37.787457 6 CGTTCTG 490 0.0 37.65306 1 GTTTTTT 9780 0.0 37.638035 2 CGTTGAT 30 1.14006325E-4 37.500004 25 GCGATGT 300 0.0 37.500004 9 TAAGCGC 30 1.14006325E-4 37.500004 32 TTTGGGA 7490 0.0 37.429905 4 TTACGGG 295 0.0 37.372883 3 TTTGGGC 2900 0.0 37.318966 4 TGGGACT 1965 0.0 37.213737 6 TCGTTTG 375 0.0 37.2 1 TTGTTCG 375 0.0 37.2 1 TACGGGG 310 0.0 37.016132 4 TTGGGAT 4525 0.0 36.745857 5 >>END_MODULE