##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933865.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1885202 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.365243088008604 33.0 31.0 34.0 31.0 34.0 2 32.58793169113973 34.0 31.0 34.0 31.0 34.0 3 32.63491392434339 34.0 31.0 34.0 31.0 34.0 4 36.034636076134014 37.0 35.0 37.0 35.0 37.0 5 36.06963603900272 37.0 35.0 37.0 35.0 37.0 6 35.71277295483455 37.0 35.0 37.0 35.0 37.0 7 36.02541902671438 37.0 35.0 37.0 35.0 37.0 8 36.03762832842316 37.0 35.0 37.0 35.0 37.0 9 37.87458744474067 39.0 38.0 39.0 35.0 39.0 10 37.55438621431549 39.0 37.0 39.0 35.0 39.0 11 37.483680263441265 39.0 37.0 39.0 35.0 39.0 12 37.22383118626015 39.0 37.0 39.0 34.0 39.0 13 37.11554623854632 39.0 37.0 39.0 34.0 39.0 14 38.02862823188178 40.0 38.0 41.0 33.0 41.0 15 38.170601877146325 40.0 37.0 41.0 33.0 41.0 16 38.33766620234861 40.0 38.0 41.0 33.0 41.0 17 38.35850375715706 40.0 37.0 41.0 34.0 41.0 18 38.297276896587206 40.0 37.0 41.0 34.0 41.0 19 38.30071631581125 40.0 37.0 41.0 34.0 41.0 20 38.184351066888325 40.0 37.0 41.0 34.0 41.0 21 38.10111065021149 40.0 36.0 41.0 34.0 41.0 22 38.151397038619734 40.0 36.0 41.0 34.0 41.0 23 38.119778676237345 40.0 36.0 41.0 34.0 41.0 24 38.07789987492057 40.0 36.0 41.0 34.0 41.0 25 37.97864632012909 40.0 36.0 41.0 34.0 41.0 26 37.92249955177217 40.0 36.0 41.0 34.0 41.0 27 37.92307614780803 40.0 36.0 41.0 34.0 41.0 28 37.84486490041916 40.0 36.0 41.0 34.0 41.0 29 37.81538105730845 40.0 36.0 41.0 34.0 41.0 30 37.7347875718358 40.0 36.0 41.0 33.0 41.0 31 37.617487675060815 40.0 35.0 41.0 33.0 41.0 32 37.53252012251207 40.0 35.0 41.0 33.0 41.0 33 37.443554589906014 40.0 35.0 41.0 33.0 41.0 34 37.325682340672245 40.0 35.0 41.0 32.0 41.0 35 37.237759667133815 40.0 35.0 41.0 32.0 41.0 36 37.14433095233296 40.0 35.0 41.0 32.0 41.0 37 37.06945356518824 39.0 35.0 41.0 32.0 41.0 38 37.030626426239735 39.0 35.0 41.0 32.0 41.0 39 36.98767399992149 39.0 35.0 41.0 32.0 41.0 40 36.87995716108937 39.0 35.0 41.0 31.0 41.0 41 36.706853164806745 39.0 35.0 41.0 31.0 41.0 42 36.67169194600897 39.0 35.0 41.0 31.0 41.0 43 36.573644097555594 39.0 35.0 41.0 31.0 41.0 44 36.49892637499854 39.0 35.0 41.0 31.0 41.0 45 36.51880435093958 39.0 35.0 41.0 31.0 41.0 46 36.47276631363642 39.0 35.0 41.0 31.0 41.0 47 36.3864227812192 39.0 35.0 41.0 31.0 41.0 48 36.30112157742247 38.0 35.0 40.0 31.0 41.0 49 36.29298929239413 38.0 35.0 40.0 31.0 41.0 50 36.19451443399699 38.0 35.0 40.0 31.0 41.0 51 35.22607656898306 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 25.0 10 38.0 11 41.0 12 25.0 13 25.0 14 42.0 15 61.0 16 110.0 17 213.0 18 354.0 19 604.0 20 1101.0 21 1749.0 22 2768.0 23 4066.0 24 6128.0 25 9535.0 26 13584.0 27 16185.0 28 18137.0 29 20943.0 30 25425.0 31 32664.0 32 44343.0 33 67646.0 34 131638.0 35 131884.0 36 133978.0 37 210467.0 38 393791.0 39 617322.0 40 299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.617308914376284 4.515325148180407 53.96689585519218 16.900470082251132 2 21.552968859570488 4.580676235225721 51.75206688726195 22.114288017941846 3 21.691786874828267 4.592929564046718 50.94318805093565 22.77209551018936 4 19.57334015134718 5.095952582269699 50.028166742874234 25.30254052350889 5 18.8774465547989 6.312692220780584 49.90229163771309 24.90756958670742 6 22.446400969233004 6.420426033921034 52.919262763353736 18.21391023349222 7 81.53327866191528 2.7363115464549685 10.65434897692661 5.076060814703146 8 82.67649832750018 3.1517046979580963 9.194558461109208 4.977238513432513 9 76.32513651057022 5.49909240495183 12.00417780163611 6.1715932828418385 10 40.72322223294904 23.762705535003676 19.87808203046676 15.63599020158052 11 31.552374758779166 22.923697301403244 25.867572811826 19.65635512799159 12 27.980343750961435 20.18775706794285 30.631200263950493 21.200698917145218 13 26.65512767332095 20.221281326881684 32.68259846955392 20.44099253024344 14 21.289760991129864 21.720377975410592 35.44484888091568 21.545012152543865 15 19.327583993651608 22.18828539328942 36.84814677684407 21.635983836214898 16 24.482469252631812 22.323231144460912 31.378069830182653 21.816229772724622 17 24.621128133749064 22.651418786952274 29.575133062663845 23.15232001663482 18 24.687168802070016 21.9903755671806 31.517683516143098 21.804772114606287 19 24.947300077127014 24.45260507892523 29.215012502638977 21.385082341308784 20 23.721224569038224 27.923745041645404 28.828528719999234 19.526501669317135 21 24.03312748448177 25.767000035009513 31.32651036865015 18.87336211185857 22 22.254697374604948 23.10150318109147 32.07847222737934 22.56532721692423 23 21.460246700353597 23.773844924840944 31.46050131497845 23.30540705982701 24 22.015306582530677 25.34773461942009 29.32858123426561 23.308377563783615 25 23.82736704077335 24.839672353413587 26.918812944183166 24.414147661629894 26 21.33352287977628 24.751936397266714 28.00405473790077 25.91048598505624 27 21.153011719699002 22.976795059627563 31.37451583437743 24.495677386296006 28 19.217304034262643 23.68255497288885 30.62451663004813 26.475624362800374 29 21.247696533315793 24.178682178355423 29.86284758874646 24.710773699582326 30 24.106488323267214 22.380625524479605 29.72148342724016 23.791402725013022 31 22.83930316220755 23.473611846369778 30.545798275198095 23.141286716224574 32 25.486976992385962 23.017109041895775 28.372980720368428 23.122933245349834 33 24.514932617300428 21.761540673094977 29.08632602766176 24.637200681942836 34 21.16733379234692 21.960988795895613 32.73214223197302 24.139535179784446 35 22.279257076960455 23.649402026944593 29.820411817937813 24.250929078157142 36 24.066970011701663 22.93467755709998 28.840835093533745 24.15751733766461 37 20.785040542074537 24.794372168075355 31.354040574962262 23.06654671488785 38 22.175660751473846 23.250877094337902 31.3105439098834 23.262918244304853 39 20.894843099041907 21.743346336360773 31.315848381234478 26.045962183362843 40 23.815219801379374 20.904072879192785 31.580488456939893 23.700218862487947 41 22.50177965013829 22.053392686831437 29.764131376902846 25.68069628612743 42 21.92396358586507 21.431125152636163 32.19400361340588 24.450907648092883 43 20.976054555426952 21.316177258458243 32.752723580815214 24.95504460529959 44 22.06278160112285 20.857181352449235 30.64196834079319 26.438068705634727 45 21.499711967205638 20.496901658283832 28.983154059883237 29.020232314627293 46 22.032705248562223 20.82079267898082 30.81484106212491 26.33166101033205 47 19.53345052678705 22.11916813158484 33.622020345830315 24.7253609957978 48 19.60071122351875 23.234114964868485 32.28216392726084 24.883009884351914 49 22.46634578151307 20.363653337944687 32.62271098800022 24.547289892542018 50 20.856863084168168 20.642880709865572 31.18222874790075 27.3180274580655 51 20.016157419735393 20.783820513663787 29.50898630491587 29.691035761684955 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 265.0 1 985.5 2 1706.0 3 7773.0 4 13840.0 5 9039.0 6 4238.0 7 4143.5 8 4049.0 9 4258.5 10 4468.0 11 4473.0 12 4478.0 13 4372.0 14 4266.0 15 4149.5 16 4033.0 17 4050.0 18 4067.0 19 4083.0 20 4099.0 21 4672.0 22 5245.0 23 5926.5 24 6608.0 25 7518.5 26 10950.0 27 13471.0 28 16282.5 29 19094.0 30 22361.0 31 25628.0 32 29203.0 33 32778.0 34 37441.5 35 42105.0 36 46221.5 37 50338.0 38 56284.0 39 62230.0 40 68863.0 41 75496.0 42 82837.0 43 90178.0 44 101768.0 45 113358.0 46 135092.0 47 156826.0 48 185654.0 49 214482.0 50 215057.5 51 215633.0 52 188468.5 53 161304.0 54 143164.0 55 125024.0 56 114439.0 57 103854.0 58 95024.5 59 86195.0 60 76656.0 61 67117.0 62 57570.5 63 48024.0 64 42561.5 65 37099.0 66 32118.5 67 27138.0 68 22401.5 69 17665.0 70 14666.0 71 11667.0 72 9790.0 73 7913.0 74 6570.0 75 3991.0 76 2755.0 77 2182.5 78 1610.0 79 1174.5 80 739.0 81 510.0 82 281.0 83 184.5 84 88.0 85 64.0 86 40.0 87 42.5 88 45.0 89 24.5 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1885202.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.78491436222757 #Duplication Level Percentage of deduplicated Percentage of total 1 69.9291061814047 20.82832439040258 2 11.949798311124603 7.118474386854759 3 4.6976035240978185 4.197531560188559 4 2.4051780627194024 2.865520904960233 5 1.3873995346234298 2.066178816247662 6 0.9783656933669298 1.7484323035125242 7 0.7473100694429741 1.5580996494272525 8 0.5588040329299597 1.3315144212868997 9 0.4678097883850693 1.2540307036374982 >10 6.54194820236929 44.22355980301514 >50 0.24922774579205473 4.709412245106448 >100 0.07987604575480439 4.3586746258978 >500 0.004327318850917156 0.8681736194304599 >1k 0.0025242693297016752 1.458484421408662 >5k 7.212198084861929E-4 1.413588148623566 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8691 0.46101160512242195 No Hit CTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGCT 6452 0.3422444915717255 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 6042 0.32049615903229467 No Hit GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 5137 0.2724906933050145 No Hit TCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 4806 0.2549328931329375 No Hit CGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTG 2929 0.15536796587315313 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2546 0.1350518405985141 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2370 0.12571597102061213 No Hit TCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTG 2167 0.11494789417791833 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1217885404322718E-4 0.0 0.0 0.3579987714844351 0.0 2 2.1217885404322718E-4 0.0 0.0 1.26957217316765 0.0 3 2.1217885404322718E-4 0.0 0.0 1.9432930794684071 0.0 4 2.1217885404322718E-4 0.0 0.0 2.6611471874101555 0.0 5 2.1217885404322718E-4 0.0 0.0 3.92838539318333 0.0 6 2.1217885404322718E-4 0.0 0.0 5.045294880866878 0.0 7 2.1217885404322718E-4 0.0 0.0 6.015429646266023 0.0 8 2.1217885404322718E-4 0.0 0.0 7.470605272007987 0.0 9 2.1217885404322718E-4 0.0 0.0 8.342395138558096 0.0 10 2.1217885404322718E-4 0.0 0.0 9.65700227349642 0.0 11 2.65223567554034E-4 0.0 0.0 11.799955654619504 0.0 12 2.65223567554034E-4 0.0 0.0 13.620078909315819 0.0 13 2.65223567554034E-4 0.0 0.0 14.275552434168858 0.0 14 2.65223567554034E-4 0.0 0.0 14.582522191255897 0.0 15 2.65223567554034E-4 0.0 0.0 14.941528812297038 0.0 16 2.65223567554034E-4 0.0 0.0 15.645060847590868 0.0 17 2.65223567554034E-4 0.0 0.0 16.541410416496483 0.0 18 2.65223567554034E-4 0.0 0.0 17.45123334263384 0.0 19 2.65223567554034E-4 0.0 0.0 18.148028699311798 0.0 20 2.65223567554034E-4 0.0 0.0 18.977011482058685 0.0 21 2.65223567554034E-4 0.0 0.0 20.084744234304864 0.0 22 2.65223567554034E-4 0.0 0.0 21.213588782528344 0.0 23 2.65223567554034E-4 0.0 0.0 22.26069142723167 0.0 24 2.65223567554034E-4 0.0 0.0 23.089833344119093 0.0 25 3.182682810648408E-4 0.0 0.0 23.853518084534176 0.0 26 3.182682810648408E-4 0.0 0.0 24.501724483636238 0.0 27 3.182682810648408E-4 0.0 0.0 25.20626436848677 0.0 28 3.182682810648408E-4 0.0 0.0 25.877120860257946 0.0 29 3.713129945756476E-4 0.0 0.0 26.623513024068508 0.0 30 3.713129945756476E-4 0.0 0.0 27.544369250616114 0.0 31 3.713129945756476E-4 0.0 0.0 28.253683159682623 0.0 32 3.713129945756476E-4 0.0 0.0 28.9358381754316 0.0 33 3.713129945756476E-4 0.0 0.0 29.626692524196347 0.0 34 3.713129945756476E-4 0.0 0.0 30.397220032654324 0.0 35 3.713129945756476E-4 0.0 0.0 31.17734863425776 0.0 36 3.713129945756476E-4 0.0 0.0 31.888306929443104 0.0 37 3.713129945756476E-4 0.0 0.0 32.601758326163456 0.0 38 3.713129945756476E-4 0.0 0.0 33.47821612750252 0.0 39 3.713129945756476E-4 0.0 0.0 35.09119977593913 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 4200 0.0 42.857143 1 TTTCGCG 530 0.0 40.33019 1 GTTACCG 70 0.0 38.571426 38 ATAACGC 35 6.2504187E-6 38.571426 11 TTGGGAC 3090 0.0 37.936893 5 CACGACG 30 1.1401992E-4 37.499996 26 GCGATGT 500 0.0 37.350002 9 CGCGACC 365 0.0 36.986298 10 TTTGGGA 7800 0.0 36.980766 4 TTTGGGC 4580 0.0 36.894108 4 TTGTTCG 465 0.0 36.774193 1 TGGGCGA 2420 0.0 36.446278 6 GGGCGAT 3550 0.0 36.316902 7 TAGTTCG 25 0.0021074496 36.000004 1 CGTTAGA 25 0.0021074496 36.000004 2 CCGTTGA 25 0.0021074496 36.000004 20 TTCGGGT 420 0.0 35.892857 4 TCAAGCG 240 0.0 35.625 17 GTTGGGA 2875 0.0 35.452175 4 TTGGGAG 4705 0.0 35.435707 5 >>END_MODULE