##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933861.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 691393 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.40823670473956 30.0 16.0 31.0 16.0 34.0 2 26.347453618998166 30.0 16.0 33.0 16.0 34.0 3 27.344475573226806 31.0 25.0 33.0 16.0 34.0 4 31.512410452521216 35.0 28.0 35.0 19.0 37.0 5 33.42726929546582 35.0 33.0 35.0 28.0 37.0 6 31.87958657377208 35.0 30.0 37.0 17.0 37.0 7 33.256119168114225 35.0 32.0 35.0 28.0 37.0 8 32.4924565334043 35.0 32.0 37.0 25.0 37.0 9 34.383188721899124 35.0 32.0 39.0 28.0 39.0 10 33.518955210712285 35.0 32.0 37.0 27.0 39.0 11 34.27784631895319 35.0 32.0 39.0 27.0 39.0 12 34.417091292506576 37.0 33.0 39.0 27.0 39.0 13 34.70692211231528 37.0 34.0 39.0 29.0 39.0 14 34.55869816443036 37.0 33.0 39.0 27.0 40.0 15 35.07955533249541 37.0 33.0 39.0 27.0 40.0 16 34.65944838897703 36.0 32.0 39.0 27.0 40.0 17 34.13108174366822 36.0 32.0 38.0 27.0 40.0 18 34.47448846025343 36.0 32.0 39.0 27.0 40.0 19 34.240236739452094 36.0 32.0 39.0 27.0 40.0 20 34.353322929216816 36.0 32.0 39.0 27.0 40.0 21 34.086231709028006 36.0 32.0 39.0 25.0 40.0 22 35.259221600450104 37.0 34.0 39.0 28.0 40.0 23 35.70186276112139 37.0 34.0 39.0 30.0 40.0 24 35.96364151792107 38.0 34.0 39.0 30.0 40.0 25 33.93760712069691 36.0 32.0 39.0 24.0 40.0 26 34.8977195314387 37.0 33.0 39.0 27.0 40.0 27 35.25252063587569 37.0 34.0 39.0 29.0 40.0 28 35.446200641313986 38.0 34.0 39.0 28.0 40.0 29 35.970589809269114 38.0 34.0 40.0 30.0 40.0 30 34.161784976127905 37.0 33.0 39.0 24.0 40.0 31 34.75488615013458 37.0 33.0 39.0 26.0 40.0 32 35.27335393907662 37.0 34.0 39.0 29.0 40.0 33 35.59957506078309 38.0 34.0 39.0 30.0 40.0 34 35.791713251363554 38.0 35.0 40.0 30.0 40.0 35 35.952997788522595 38.0 35.0 40.0 30.0 41.0 36 35.830111094558376 38.0 35.0 40.0 30.0 41.0 37 36.1813917699485 38.0 35.0 40.0 30.0 41.0 38 35.71537605963613 38.0 35.0 40.0 30.0 41.0 39 35.67964095673517 38.0 35.0 40.0 30.0 41.0 40 35.23473624986079 37.0 34.0 40.0 28.0 41.0 41 34.53919840090947 37.0 33.0 39.0 26.0 40.0 42 35.61813903235931 38.0 35.0 40.0 30.0 40.0 43 35.66247271812124 38.0 35.0 40.0 30.0 40.0 44 36.255137092796716 38.0 35.0 40.0 31.0 41.0 45 36.52061851942383 39.0 35.0 40.0 31.0 41.0 46 36.25895981012246 38.0 35.0 40.0 31.0 41.0 47 35.77245502919468 38.0 35.0 40.0 29.0 41.0 48 36.05579460596216 38.0 35.0 40.0 30.0 41.0 49 36.37893643701918 39.0 35.0 40.0 31.0 41.0 50 36.00656645352209 38.0 35.0 40.0 30.0 41.0 51 35.58518960996134 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 9.0 11 13.0 12 6.0 13 14.0 14 22.0 15 39.0 16 147.0 17 378.0 18 894.0 19 1542.0 20 2242.0 21 2794.0 22 3079.0 23 3407.0 24 4225.0 25 5359.0 26 7418.0 27 9748.0 28 13256.0 29 18036.0 30 24898.0 31 34111.0 32 47145.0 33 61413.0 34 77601.0 35 95945.0 36 107711.0 37 103930.0 38 59723.0 39 6283.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.1907757237924 3.653638379329846 39.90176354114085 13.253822355736897 2 15.491189526072727 28.84379795572127 37.816119052405796 17.848893465800202 3 14.782186108334914 28.833094925751347 40.46482969888327 15.919889267030474 4 15.705394761011465 3.1325165282263487 61.98659807085116 19.17549063991102 5 34.378566170036436 3.4923697520802204 40.48565721666259 21.643406861220754 6 16.385326435182307 24.651247553851427 42.29418001050054 16.669246000465726 7 60.00885169505621 1.4227798083000551 32.995127228652876 5.573241267990854 8 56.561608231497864 20.072520259823285 13.554953550296286 9.81091795838257 9 53.5737272434057 3.3007276614024152 14.37749586703944 28.74804922815244 10 39.75380138358358 19.19096664270538 22.864275455493473 18.19095651821757 11 30.162150904044445 21.860215535881906 28.52502122526551 19.452612334808133 12 20.923121871352475 17.620947854548717 31.81171923927491 29.644211034823897 13 22.098430270482925 20.907935139638383 40.98031076392154 16.013323825957162 14 19.200946494974637 28.91640499686864 26.06751876284544 25.81512974531128 15 11.937783576055876 24.208084258880262 42.029786243135234 21.82434592192863 16 13.194087877661476 25.906828677756355 24.98810372682396 35.91097971775821 17 14.635091764018437 29.018228417123108 34.283251349088 22.06342846977045 18 13.370687872165323 24.870659668235 33.783390922384235 27.975261537215445 19 14.399335833599705 27.75729577823322 29.35045625281135 28.492912135355724 20 16.807806847914282 26.31990778037961 41.15720002950565 15.715085342200455 21 20.75505537371654 33.443352767528744 28.129298387458363 17.672293471296356 22 15.853935460729282 22.025100051634887 34.43410621744796 27.68685827018787 23 17.311138527581274 31.403847016096485 28.945910647056017 22.33910380926622 24 21.297149378139498 22.618395037265344 25.982328429706403 30.102127154888752 25 13.532535041575485 36.251741050314365 23.599023999375174 26.616699908734976 26 15.216526635357894 21.881476960281635 31.67532792492837 31.226668479432103 27 19.261548786290867 27.204498743840333 27.855937216604737 25.678015253264064 28 11.46815197724015 24.760158115572477 38.14675589715256 25.62493401003481 29 18.656104415289136 17.964891168987826 28.70567101489312 34.67333340082992 30 14.40815860154789 27.395273021277333 38.64864122141821 19.547927155756568 31 19.38796024836815 23.115073482086164 27.81428218104609 29.682684088499595 32 19.736821171171822 28.303005671159532 23.85965724269699 28.10051591497166 33 18.112130148844436 20.160747939305143 29.304896057669083 32.42222585418134 34 20.503823440503446 24.898429691940763 25.917531707726287 28.6802151598295 35 15.904847170856517 19.126459191805527 29.9809225722563 34.98777106508165 36 20.61186618898369 20.655546122104216 30.70945178791223 28.02313590099987 37 14.434771540932582 20.143391674489038 39.34853260012757 26.073304184450812 38 18.250690996292988 21.0679020470268 34.47330244882433 26.20810450785588 39 19.946253433286135 26.34955806610712 27.45891265893638 26.245275841670367 40 16.476880732087253 19.877262280642125 35.48647440746435 28.159382579806273 41 22.392474323575737 28.873882148069185 23.412733423682333 25.320910104672738 42 18.003508858203656 17.547473000160547 32.1517573941304 32.2972607475054 43 28.254552765214573 17.44376931788433 25.089493240458033 29.212184676443066 44 19.768351718921075 17.974726385716952 34.77052848380009 27.486393411561878 45 17.076105774863212 15.825442259322845 31.834860925696383 35.26359104011756 46 27.283035842133202 21.977081052310336 27.131313160532432 23.60856994502403 47 13.011268554931855 17.79913883999404 46.24866031330951 22.940932291764597 48 19.519289318809996 24.59961266602352 27.587204383035406 28.293893632131073 49 17.75140911174976 15.268016887645667 40.275646412387744 26.704927588216833 50 25.38006604058762 15.330499440983639 30.862042282753805 28.427392235674937 51 18.982402193831874 15.797238328996677 28.2648218885641 36.95553758860734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 91.0 1 239.5 2 388.0 3 1821.5 4 3255.0 5 2309.5 6 1364.0 7 1472.5 8 1581.0 9 1748.5 10 1916.0 11 2059.5 12 2203.0 13 2110.0 14 2017.0 15 1929.5 16 1842.0 17 1756.5 18 1671.0 19 1741.0 20 1811.0 21 2089.5 22 2368.0 23 2817.5 24 3267.0 25 3443.0 26 4202.0 27 4785.0 28 5783.5 29 6782.0 30 7397.0 31 8012.0 32 9051.0 33 10090.0 34 11568.5 35 13047.0 36 14278.0 37 15509.0 38 17133.5 39 18758.0 40 20846.5 41 22935.0 42 25089.0 43 27243.0 44 32997.5 45 38752.0 46 112565.0 47 186378.0 48 142816.5 49 99255.0 50 89658.5 51 80062.0 52 59946.0 53 39830.0 54 33375.0 55 26920.0 56 23099.5 57 19279.0 58 16770.0 59 14261.0 60 12392.5 61 10524.0 62 9122.0 63 7720.0 64 6599.5 65 5479.0 66 4329.0 67 3179.0 68 2582.5 69 1986.0 70 1712.5 71 1439.0 72 1172.5 73 906.0 74 652.5 75 344.5 76 290.0 77 178.0 78 66.0 79 59.0 80 52.0 81 48.0 82 44.0 83 29.0 84 14.0 85 8.0 86 2.0 87 1.0 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 691393.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.464986171589818 #Duplication Level Percentage of deduplicated Percentage of total 1 72.92466851751406 20.757996809188093 2 11.338998711534348 6.455288830470001 3 4.336004823812965 3.702729520493484 4 2.039833425518012 2.3225532099886763 5 1.2665624499145274 1.8026341311135972 6 0.8847893343801585 1.5111309700740825 7 0.7075513137370042 1.4098306852849825 8 0.5844461358163763 1.3309000939241806 9 0.5636557148055671 1.444000691473024 >10 5.177246266491168 25.14263711630253 >50 0.08554499671046976 1.701152157237047 >100 0.07369237668430446 4.282438223538011 >500 0.006183975665815759 1.1767390364191932 >1k 0.006183975665815759 4.491323337955978 >5k 0.002061325221938586 4.097170035679941 >10k+ 0.002576656527423233 18.371475150857165 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 39325 5.687792615777134 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG 33613 4.861634410530624 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC 25103 3.6307859639886435 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 14052 2.0324186099656782 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTCTACGT 13148 1.9016680816843676 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTA 8158 1.1799367364147453 No Hit GAACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCT 7223 1.044702506389275 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTC 6481 0.9373829356097039 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCT 6069 0.8777930930744163 No Hit CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 4888 0.7069785201759347 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 4885 0.7065446135555321 No Hit TCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 4057 0.5867863863244205 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGT 2797 0.4045456057553374 No Hit TGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCTT 2417 0.34958410050434413 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATG 2363 0.3417737813370977 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTAT 1917 0.27726633043724774 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1810 0.26179032764288906 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCTTCTACG 1653 0.23908254784182079 No Hit CGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1408 0.20364684050894355 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTT 1333 0.19279917499887908 No Hit TCCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1090 0.15765273874627023 No Hit TGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 947 0.13696985650708063 No Hit TTCCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCT 904 0.13075052828131034 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCTTCTACGTCG 812 0.11744405858896459 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCC 737 0.10659639307890013 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 693 0.10023242931299564 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8215298679622154 0.0 2 0.0 0.0 0.0 4.392292082795168 0.0 3 0.0 0.0 0.0 5.382756261634121 0.0 4 0.0 0.0 0.0 7.699528343503623 0.0 5 0.0 0.0 0.0 13.40467722409686 0.0 6 0.0 0.0 0.0 14.482645904717 0.0 7 0.0 0.0 0.0 16.275981966840856 0.0 8 0.0 0.0 0.0 18.482686402668236 0.0 9 0.0 0.0 0.0 19.014655919281797 0.0 10 0.0 0.0 0.0 25.25539020499195 0.0 11 0.0 0.0 0.0 27.279419953629844 0.0 12 0.0 0.0 0.0 35.03824886858849 0.0 13 1.4463554013419285E-4 0.0 0.0 35.94598151847068 0.0 14 1.4463554013419285E-4 0.0 0.0 36.41821655700882 0.0 15 1.4463554013419285E-4 0.0 0.0 38.04290757933621 0.0 16 1.4463554013419285E-4 0.0 0.0 39.10858223904494 0.0 17 1.4463554013419285E-4 0.0 0.0 40.149090314770326 0.0 18 1.4463554013419285E-4 0.0 0.0 41.06998479880473 0.0 19 1.4463554013419285E-4 0.0 0.0 43.95531918894174 0.0 20 1.4463554013419285E-4 0.0 0.0 44.907744220725405 0.0 21 1.4463554013419285E-4 0.0 0.0 45.83427949082505 0.0 22 1.4463554013419285E-4 0.0 0.0 46.87999444599526 0.0 23 1.4463554013419285E-4 0.0 0.0 47.78309875859316 0.0 24 1.4463554013419285E-4 0.0 0.0 48.496441242535 0.0 25 1.4463554013419285E-4 0.0 0.0 49.11128692364545 0.0 26 1.4463554013419285E-4 0.0 0.0 49.701689198473225 0.0 27 1.4463554013419285E-4 0.0 0.0 50.29426100640301 0.0 28 1.4463554013419285E-4 0.0 0.0 50.85819497738623 0.0 29 1.4463554013419285E-4 0.0 0.0 51.438906671025016 0.0 30 1.4463554013419285E-4 0.0 0.0 52.08383654448338 0.0 31 1.4463554013419285E-4 0.0 0.0 52.67626371687304 0.0 32 1.4463554013419285E-4 0.0 0.0 53.20577442930432 0.0 33 1.4463554013419285E-4 0.0 0.0 53.73774394591788 0.0 34 1.4463554013419285E-4 0.0 0.0 54.246137869489566 0.0 35 1.4463554013419285E-4 0.0 0.0 54.76653654289239 0.0 36 1.4463554013419285E-4 0.0 0.0 55.28216224347079 0.0 37 1.4463554013419285E-4 0.0 0.0 55.800246748231466 0.0 38 1.4463554013419285E-4 0.0 0.0 56.34132830387348 0.0 39 1.4463554013419285E-4 0.0 0.0 56.88327767275631 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 20 7.0313335E-4 45.0 1 ATAACCG 20 7.0313335E-4 45.0 13 CTTACGA 20 7.0313335E-4 45.0 24 TACGGCT 4280 0.0 44.106308 7 ACGGCTG 4310 0.0 43.85151 8 TGATACC 3860 0.0 43.251293 4 GATACCT 3885 0.0 43.030888 5 TTTCGCG 110 0.0 42.954544 1 GGCGACT 880 0.0 42.954544 10 TTTCTCG 200 0.0 42.75 1 CGGCTGT 4505 0.0 42.60267 9 CGTTTTT 1195 0.0 42.552303 1 CGGGCCA 80 0.0 42.1875 6 CCGGTGA 160 0.0 42.1875 18 ATGATAC 13255 0.0 42.148247 3 GAATCTG 2920 0.0 42.071915 1 TACGGCC 305 0.0 42.049183 7 ACGGCCT 300 0.0 42.0 8 AATGATA 13230 0.0 41.92177 2 GAATGAT 13945 0.0 41.91825 1 >>END_MODULE