##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933860.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 647796 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.50245447640924 30.0 16.0 31.0 16.0 34.0 2 26.474572241878615 30.0 16.0 33.0 16.0 34.0 3 27.536704456341194 31.0 25.0 33.0 16.0 34.0 4 31.53203786377193 35.0 28.0 35.0 19.0 37.0 5 33.35146867223632 35.0 32.0 37.0 28.0 37.0 6 31.983394463689187 35.0 31.0 37.0 17.0 37.0 7 33.178545406269876 35.0 32.0 35.0 28.0 37.0 8 32.38967051355674 35.0 32.0 37.0 19.0 37.0 9 34.31942926476854 35.0 32.0 39.0 28.0 39.0 10 33.26615014603363 35.0 31.0 37.0 27.0 39.0 11 33.787533421015254 35.0 32.0 39.0 27.0 39.0 12 33.877317859326084 35.0 32.0 39.0 26.0 39.0 13 34.02437650124422 35.0 32.0 38.0 27.0 39.0 14 34.04894133338273 36.0 32.0 39.0 25.0 40.0 15 34.56222483621387 36.0 32.0 39.0 27.0 40.0 16 34.467154783295975 36.0 32.0 39.0 27.0 40.0 17 33.913289060136215 36.0 32.0 38.0 25.0 40.0 18 34.219079772026994 36.0 32.0 39.0 27.0 40.0 19 34.00254092337711 36.0 32.0 39.0 25.0 40.0 20 33.99568382638979 36.0 32.0 39.0 25.0 40.0 21 33.729902623665474 36.0 32.0 39.0 25.0 40.0 22 34.88256796892849 37.0 33.0 39.0 27.0 40.0 23 35.42130547271054 37.0 34.0 39.0 29.0 40.0 24 35.73022834349085 37.0 34.0 39.0 30.0 40.0 25 33.79440904235284 36.0 32.0 39.0 24.0 40.0 26 34.63470290029577 36.0 33.0 39.0 27.0 40.0 27 34.92632557163058 37.0 33.0 39.0 27.0 40.0 28 35.079528123051084 37.0 34.0 39.0 27.0 40.0 29 35.508709532013164 37.0 34.0 40.0 29.0 40.0 30 33.849988267911506 36.0 32.0 39.0 24.0 40.0 31 34.51434093449172 37.0 33.0 39.0 25.0 40.0 32 34.86687321317205 37.0 33.0 39.0 27.0 40.0 33 35.37303873441639 37.0 34.0 40.0 29.0 40.0 34 35.53441052430086 38.0 34.0 40.0 30.0 41.0 35 35.530901703622746 38.0 34.0 40.0 29.0 41.0 36 35.44697404738529 38.0 34.0 40.0 29.0 41.0 37 35.68704808303849 38.0 35.0 40.0 30.0 41.0 38 35.32952194826766 37.0 34.0 40.0 30.0 41.0 39 35.371542893133025 37.0 34.0 40.0 29.0 41.0 40 34.95371382348764 37.0 33.0 40.0 27.0 41.0 41 34.27407856794423 37.0 33.0 39.0 24.0 40.0 42 35.33990639028336 37.0 34.0 40.0 29.0 41.0 43 35.42618046422022 38.0 34.0 40.0 30.0 40.0 44 35.984772984087584 38.0 35.0 40.0 31.0 41.0 45 36.17522800387776 38.0 35.0 40.0 31.0 41.0 46 35.94706512544072 38.0 35.0 40.0 31.0 41.0 47 35.531094665604606 38.0 34.0 40.0 28.0 41.0 48 35.67384176500009 38.0 34.0 40.0 30.0 41.0 49 35.967820116209424 38.0 35.0 40.0 31.0 41.0 50 35.68951490901457 38.0 35.0 40.0 29.0 41.0 51 35.24264428925155 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 10.0 11 11.0 12 23.0 13 17.0 14 29.0 15 53.0 16 153.0 17 390.0 18 1005.0 19 1905.0 20 2579.0 21 3048.0 22 3314.0 23 3701.0 24 4362.0 25 5991.0 26 7887.0 27 10584.0 28 14376.0 29 19331.0 30 26632.0 31 36247.0 32 48991.0 33 61253.0 34 69427.0 35 82611.0 36 93052.0 37 90261.0 38 54435.0 39 6111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.52897517119587 3.4106416217451176 40.48033640220069 13.58004680485832 2 15.691977103903081 27.935028928860323 38.20678114715126 18.166212820085338 3 15.95980833472266 27.75796701430697 39.683480601917886 16.59874404905248 4 16.35839060444955 3.366800659466869 60.7455124761499 19.52929625993368 5 34.29104224169337 4.048188009805556 39.112313135616766 22.5484566128843 6 17.155246404732356 23.71873244045965 42.76500626740517 16.361014887402824 7 63.42922771983772 1.5327356142983286 30.30861567530519 4.729420990558756 8 60.14161865772558 19.63287825179532 12.06274814910867 8.162754941370432 9 56.51485961629896 3.841178395667772 12.15259124786198 27.491370740171288 10 42.824747296988555 22.137061667562012 19.431117203564085 15.607073831885346 11 34.43537780412352 18.748494896541505 27.357841048725216 19.45828625060976 12 26.39797096616836 15.451314920129178 29.80892132708445 28.341792786618008 13 26.27401218902247 19.06942926476854 38.921975436711556 15.734583109497436 14 20.133035708772514 27.510203829600677 26.78945223496286 25.567308226663947 15 13.11277006958981 21.219643221014024 43.65818868903173 22.009398020364436 16 18.14537292604462 24.51435328405856 24.278630927020235 33.06164286287658 17 19.300829273413235 26.901370184440783 32.66167126688032 21.13612927526567 18 17.070034393543647 23.196191393586872 32.86729155474872 26.866482658120766 19 18.331542646141685 26.510815133159205 27.68942691835084 27.46821530234827 20 19.02064847575471 27.57503905550513 38.43524813367171 14.969064335068447 21 21.8730896763796 33.06658268961216 28.40662801252246 16.653699621485778 22 17.257439070324608 21.22890539614323 34.99450444275667 26.519151090775487 23 18.10400187713416 30.64884624171807 30.58416538539911 20.66298649574866 24 22.82153640961043 22.62980938443584 25.655144520805933 28.893509685147794 25 17.624375575026708 35.33813114005026 22.17596280310468 24.86153048181835 26 18.595977746080557 20.6497107113968 30.974102958338733 29.78020858418391 27 20.636434927044935 26.205317723480846 28.502182785938786 24.656064563535434 28 13.98233394463689 24.523306720016798 36.25570395618374 25.238655379162577 29 25.33930434889996 19.496569907810485 27.7612087756022 27.402916967687357 30 18.920771353944758 26.037209244885734 36.79985674502467 18.242162656144835 31 25.58907433821759 18.599373876961263 29.091565863327347 26.719985921493805 32 26.314611390005492 24.973911540052733 24.327102976863085 24.384374093078684 33 20.55106854627074 17.57791032979518 30.811088676064685 31.059932447869393 34 32.26586764969219 19.143989774558655 26.998777392882943 21.591365182866213 35 17.476952620886824 19.686444497959236 32.21739559984933 30.619207281304604 36 25.418032837498224 21.214394655107473 34.29320341589019 19.074369091504114 37 17.762999462793843 19.963074795151563 37.58837658769119 24.68554915436341 38 18.896998437779793 21.065736744283694 34.82871150794386 25.208553309992652 39 25.796392691526343 20.829088169732447 27.801190498243272 25.573328640497934 40 20.700807044192928 17.840647364293698 34.430592346973434 27.027953244539948 41 25.04770020191542 20.723345003673995 28.719843901475155 25.509110892935432 42 17.696003062692576 17.378310455760765 34.065817016468145 30.85986946507851 43 23.508172325855668 17.082538329968077 32.08417464757424 27.325114696602014 44 22.137679145903956 16.590408091436192 34.817133789032354 26.4547789736275 45 19.213147348856737 15.23288195666537 31.200100031491395 34.353870662986495 46 27.986742739998395 21.726284200581663 27.370344985149647 22.916628074270296 47 14.033893386189481 17.89760974133832 46.05894448252227 22.00955238994992 48 22.127182014090856 22.71980685277464 28.12582973652199 27.027181396612516 49 20.052763524319385 14.781350919116512 39.33831020876943 25.827575347794674 50 23.751304422997364 15.923531482133264 32.460218957820054 27.864945137049318 51 20.21068361027237 16.009206602078432 28.765691668364735 35.01441811928447 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 53.0 1 240.5 2 428.0 3 1765.0 4 3102.0 5 2119.5 6 1137.0 7 1187.0 8 1237.0 9 1357.5 10 1478.0 11 1509.5 12 1541.0 13 1460.5 14 1380.0 15 1338.0 16 1296.0 17 1351.5 18 1407.0 19 1415.0 20 1423.0 21 1628.5 22 1834.0 23 2051.0 24 2268.0 25 2431.5 26 3355.0 27 4115.0 28 4613.0 29 5111.0 30 6230.0 31 7349.0 32 8276.5 33 9204.0 34 10501.5 35 11799.0 36 12761.0 37 13723.0 38 15408.5 39 17094.0 40 18976.0 41 20858.0 42 22802.5 43 24747.0 44 28433.0 45 32119.0 46 96392.5 47 160666.0 48 121074.5 49 81483.0 50 74829.5 51 68176.0 52 53921.0 53 39666.0 54 35020.5 55 30375.0 56 28036.5 57 25698.0 58 23935.5 59 22173.0 60 20053.0 61 17933.0 62 15386.0 63 12839.0 64 10608.5 65 8378.0 66 6936.5 67 5495.0 68 4351.5 69 3208.0 70 2572.5 71 1937.0 72 1558.0 73 1179.0 74 950.5 75 499.5 76 277.0 77 227.0 78 177.0 79 114.0 80 51.0 81 47.0 82 43.0 83 28.0 84 13.0 85 9.0 86 5.0 87 3.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 647796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.851446403595187 #Duplication Level Percentage of deduplicated Percentage of total 1 73.19468411416594 20.385778216337723 2 11.056068826020994 6.1585501668476645 3 3.8971599895988156 3.25624627729641 4 1.9784745771987478 2.2041351459090626 5 1.1754685809796628 1.6369250091132583 6 0.8907605287089093 1.488538147426458 7 0.660346545441121 1.2874124492706833 8 0.5797296909431845 1.2917048332701526 9 0.4936775991134638 1.2374671673127768 >10 5.89718511679662 30.709108228832644 >50 0.09215569009344746 1.7370403752891912 >100 0.06911676757008542 3.685204947917336 >500 0.0039334745771593335 0.6820454054879072 >1k 0.006181174335536095 3.4678205816431955 >5k 0.0022476997583767617 3.6462353962958374 >10k+ 0.002809624697970952 17.125787651749704 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGC 34674 5.352611007168924 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCG 30495 4.707500509419632 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTC 23230 3.58600547085811 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTCTGCTT 10972 1.6937430919610494 No Hit GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 10056 1.5523405516551507 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTA 7032 1.0855269251431006 No Hit GAACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCT 5834 0.9005921617299273 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTC 5356 0.8268034998672421 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCT 5076 0.7835800159309412 No Hit CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 3245 0.5009293049046305 No Hit CTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGCT 3183 0.4913583906044495 No Hit TCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC 2540 0.3920987471364442 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGT 2402 0.37079574433926726 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATG 2076 0.32047125947057403 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1697 0.26196518657108103 No Hit TGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGCTT 1658 0.25594477273709626 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTAT 1491 0.23016505196080247 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTTCTGCT 1378 0.2127212888007953 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTT 1357 0.20947952750557272 No Hit CGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTG 1131 0.17459200118555843 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGC 782 0.12071701585066905 No Hit TCCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTG 651 0.10049460015189968 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5455421151103125 0.0 2 0.0 0.0 0.0 3.1622609586968737 0.0 3 0.0 0.0 0.0 3.8546085496051226 0.0 4 0.0 0.0 0.0 5.678793941302509 0.0 5 0.0 0.0 0.0 10.83103322650958 0.0 6 0.0 0.0 0.0 11.70167768865507 0.0 7 0.0 0.0 0.0 13.21419088725463 0.0 8 0.0 0.0 0.0 15.031584017190598 0.0 9 0.0 0.0 0.0 15.453630463911479 0.0 10 0.0 0.0 0.0 21.324923278316014 0.0 11 0.0 0.0 0.0 22.995819671625018 0.0 12 0.0 0.0 0.0 30.26338538675756 0.0 13 0.0 0.0 0.0 31.060549926211337 0.0 14 0.0 0.0 0.0 31.46762252314 0.0 15 0.0 0.0 0.0 32.939382151171046 0.0 16 0.0 0.0 0.0 33.82963155067336 0.0 17 0.0 0.0 0.0 34.608426109454214 0.0 18 0.0 0.0 0.0 35.31374074554335 0.0 19 0.0 0.0 0.0 37.814836769600305 0.0 20 0.0 0.0 0.0 38.67591031744561 0.0 21 0.0 0.0 0.0 39.478940901147894 0.0 22 0.0 0.0 0.0 40.39882926106367 0.0 23 0.0 0.0 0.0 41.15863636082965 0.0 24 1.5436958548678905E-4 0.0 0.0 41.75712724376193 0.0 25 1.5436958548678905E-4 0.0 0.0 42.30915288146268 0.0 26 1.5436958548678905E-4 0.0 0.0 42.84496971268733 0.0 27 1.5436958548678905E-4 0.0 0.0 43.419996418625615 0.0 28 1.5436958548678905E-4 0.0 0.0 43.89391104607006 0.0 29 1.5436958548678905E-4 0.0 0.0 44.4508765105064 0.0 30 1.5436958548678905E-4 0.0 0.0 45.063106286547 0.0 31 1.5436958548678905E-4 0.0 0.0 45.596761943574826 0.0 32 1.5436958548678905E-4 0.0 0.0 46.05678330832546 0.0 33 1.5436958548678905E-4 0.0 0.0 46.5506116122977 0.0 34 3.087391709735781E-4 0.0 0.0 47.11575866476483 0.0 35 3.087391709735781E-4 0.0 0.0 47.67627462966736 0.0 36 3.087391709735781E-4 0.0 0.0 48.142625147422955 0.0 37 3.087391709735781E-4 0.0 0.0 48.63243984217254 0.0 38 3.087391709735781E-4 0.0 0.0 49.21997048453525 0.0 39 3.087391709735781E-4 0.0 0.0 50.20469407035548 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGTGA 95 0.0 45.000004 18 TCGTTGA 20 7.031004E-4 45.0 24 GCGACGA 25 3.8889135E-5 45.0 33 ACGCCCA 20 7.031004E-4 45.0 19 CTCGTAC 20 7.031004E-4 45.0 29 GGTCGTC 20 7.031004E-4 45.0 9 GATCGAG 20 7.031004E-4 45.0 36 TAGGTAA 25 3.8889135E-5 45.0 40 GGCCGTT 20 7.031004E-4 45.0 39 CGTTGAT 20 7.031004E-4 45.0 25 TAGCCCG 20 7.031004E-4 45.0 30 CTACGGC 160 0.0 45.0 6 CGAGGGT 20 7.031004E-4 45.0 4 ATCGGGA 20 7.031004E-4 45.0 38 CCGTTTG 25 3.8889135E-5 45.0 1 TCGAATA 40 6.8066583E-9 45.0 44 CCGTTCG 20 7.031004E-4 45.0 1 CTTACCG 20 7.031004E-4 45.0 1 ACGGCTG 4030 0.0 43.995037 8 TACGGCT 4040 0.0 43.941833 7 >>END_MODULE