##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933854.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 353031 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.967620407273017 25.0 16.0 31.0 16.0 33.0 2 24.832816381564225 28.0 16.0 31.0 16.0 34.0 3 26.00125767992046 30.0 16.0 33.0 16.0 34.0 4 30.61044214247474 32.0 28.0 35.0 19.0 37.0 5 33.037268681787154 35.0 32.0 35.0 28.0 37.0 6 31.03786353039818 35.0 28.0 36.0 17.0 37.0 7 32.97621172078373 35.0 32.0 35.0 28.0 37.0 8 31.456169571510717 35.0 28.0 36.0 17.0 37.0 9 34.057439714925884 35.0 32.0 37.0 28.0 39.0 10 33.39027167585849 35.0 32.0 37.0 27.0 39.0 11 34.028632046477505 35.0 32.0 37.0 27.0 39.0 12 34.27165603020698 35.0 33.0 39.0 27.0 39.0 13 34.412915579651646 35.0 33.0 37.0 27.0 39.0 14 34.3689024476604 36.0 32.0 38.0 27.0 40.0 15 34.930079794692254 37.0 33.0 39.0 27.0 40.0 16 34.594270758092065 36.0 32.0 38.0 27.0 40.0 17 33.981466216847814 36.0 32.0 38.0 27.0 40.0 18 34.395775441816724 36.0 32.0 38.0 27.0 40.0 19 34.042415538578766 36.0 32.0 39.0 27.0 40.0 20 33.662672683135476 35.0 31.0 39.0 25.0 40.0 21 33.85965255175891 36.0 32.0 39.0 25.0 40.0 22 35.12586430086876 37.0 33.0 39.0 27.0 40.0 23 35.293056417141834 37.0 33.0 39.0 28.0 40.0 24 35.691964728309976 37.0 34.0 39.0 30.0 40.0 25 33.68515512801992 36.0 32.0 39.0 24.0 40.0 26 34.77080199755829 37.0 33.0 39.0 27.0 40.0 27 34.74760573434061 37.0 33.0 39.0 27.0 40.0 28 34.88658786338877 37.0 33.0 39.0 27.0 40.0 29 35.30772085170991 37.0 34.0 40.0 27.0 40.0 30 33.39763930079795 36.0 31.0 39.0 23.0 40.0 31 34.151663734912795 36.0 32.0 39.0 25.0 40.0 32 34.70767722947843 37.0 33.0 39.0 27.0 40.0 33 35.11116304233906 37.0 34.0 39.0 27.0 40.0 34 35.27779713396274 38.0 34.0 40.0 28.0 40.0 35 35.42154938234886 38.0 34.0 40.0 29.0 40.0 36 35.42138792344015 38.0 34.0 40.0 28.0 41.0 37 35.63765788273551 38.0 35.0 40.0 30.0 41.0 38 35.358192340049456 37.0 34.0 40.0 30.0 41.0 39 35.23754571128315 37.0 34.0 40.0 29.0 40.0 40 34.85090827717679 37.0 33.0 40.0 26.0 40.0 41 34.39029716937039 37.0 33.0 39.0 25.0 40.0 42 35.241188450872585 37.0 34.0 40.0 30.0 40.0 43 35.239137639470755 38.0 34.0 40.0 29.0 40.0 44 35.89784183258694 38.0 35.0 40.0 30.0 41.0 45 36.12607391418884 38.0 35.0 40.0 31.0 41.0 46 35.78788548314454 38.0 35.0 40.0 30.0 41.0 47 35.045287807586305 37.0 34.0 40.0 26.0 41.0 48 35.5213281553178 37.0 34.0 40.0 29.0 41.0 49 35.80811600114438 38.0 35.0 40.0 30.0 41.0 50 35.39137922731998 38.0 34.0 40.0 28.0 41.0 51 35.03890876438613 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 9.0 11 3.0 12 6.0 13 7.0 14 11.0 15 25.0 16 59.0 17 189.0 18 597.0 19 1194.0 20 1852.0 21 2092.0 22 2252.0 23 2291.0 24 2321.0 25 2938.0 26 4080.0 27 5580.0 28 7711.0 29 10739.0 30 14615.0 31 20419.0 32 27523.0 33 35943.0 34 43204.0 35 49998.0 36 49850.0 37 42241.0 38 22908.0 39 2372.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 53.95985055136801 3.124088252872977 30.546042698799823 12.370018496959192 2 12.835699981021499 39.271055516371085 31.08452232240228 16.808722180205137 3 12.968832765394541 39.479535791474405 33.644920701014925 13.906710742116132 4 14.56500987165433 3.0926462548614713 64.80025833425394 17.542085539230264 5 41.295806883814734 3.713271639034532 33.73584756012928 21.255073917021452 6 14.914837507187753 32.33908636918571 37.34601210658554 15.400064017040997 7 53.270109423818305 1.3055510705858693 40.24037549110418 5.183964014491646 8 47.35306531154488 27.964682988179508 14.31913911242922 10.363112587846393 9 44.34483090720078 3.3099076285085447 13.923989677960291 38.42127178633038 10 41.80029515821557 17.05714229062037 22.25272001608924 18.889842535074823 11 36.09569697845232 18.236642107916868 26.462831875954233 19.20482903767658 12 23.152074463715653 13.729105942537625 30.270146247779937 32.84867334596678 13 22.996847302361548 19.569952780350732 43.20810353764967 14.22509637963805 14 20.245814106976443 31.291019768802176 22.631440298444048 25.83172582577734 15 10.01328495231297 21.344017947432377 46.82138395778274 21.821313142471908 16 12.169186275426238 23.642682937192486 23.12488138435435 41.06324940302693 17 13.127175800425459 28.382210060872843 35.74841869410901 22.74219544459268 18 12.284756862711774 23.32514708340061 33.4690154688965 30.921080584991117 19 13.228016803056954 27.10866751078517 28.01227087706179 31.651044809096085 20 17.769544317637827 24.75929875846597 43.783407122887226 13.687749801008978 21 19.786647631511116 36.77977288113509 26.28862621129589 17.144953276057908 22 14.011517402154485 20.054046245230587 36.2478082661296 29.68662808648532 23 17.3882746840929 34.32758029748096 27.872339822848417 20.411805195577728 24 22.08899501743473 22.26178437587634 22.991465338737957 32.657755267950975 25 12.27682554789806 42.17788239559699 19.94980610767893 25.595485948826024 26 14.152864762584588 24.25367743909175 30.85224810285782 30.741209695465837 27 21.410301078375554 32.70789250802337 20.995889879359037 24.885916534242035 28 10.814914270984701 28.12614189688724 37.90545306219567 23.153490769932386 29 20.315496372839778 25.699726086377684 23.8149057731474 30.169871767635136 30 16.754052760239187 36.44637439771578 29.747529253804906 17.052043588240124 31 22.23487455775838 19.863977950944818 24.914525919820072 32.986621571476725 32 24.954182493888638 31.838563752191735 20.506980973342284 22.700272780577343 33 25.701425653837767 18.245989728947315 19.37393599995468 36.67864861726024 34 23.869291931870006 25.977038843614302 24.02225300327733 26.131416221238364 35 18.003801365885717 26.48719234288207 26.271064014208385 29.237942277023834 36 24.338655812095823 29.8990740189955 26.10875532177061 19.65351484713807 37 14.24039248677878 27.812288439258875 31.612521280000905 26.334797793961435 38 26.525149349490558 20.092853035569114 28.973942798224517 24.40805481671581 39 22.16179315697488 21.15111704071314 22.86059864431169 33.82649115800029 40 26.64723494537307 19.008245734793828 32.52830487974144 21.816214440091663 41 24.229600233407265 23.079276324175495 20.459109823216657 32.23201361920058 42 17.89757839963063 16.28355583503998 42.264843597304484 23.554022168024904 43 33.89957255878379 19.50565247811099 20.417187159201315 26.177587803903908 44 22.226376720457978 19.361472505247416 31.488169594171616 26.92398118012299 45 17.2101033620277 14.941180802819016 31.402341437437503 36.44637439771578 46 32.18159311788483 23.350357334058483 23.604442669340653 20.863606878716034 47 15.805410856270413 17.106429746962732 47.12617305562401 19.961986341142847 48 21.834059898422517 23.602459840637223 23.540425628344252 31.023054632596004 49 18.083114514022846 13.539320909495201 44.17090850378579 24.206656072696163 50 29.033710920570716 14.368143307528234 28.928904260532363 27.669241511368693 51 20.526809260376567 15.54962595352816 25.573958094331662 38.34960669176361 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 42.0 1 125.5 2 209.0 3 663.5 4 1118.0 5 857.5 6 597.0 7 692.0 8 787.0 9 821.5 10 856.0 11 957.5 12 1059.0 13 963.0 14 867.0 15 789.5 16 712.0 17 744.0 18 776.0 19 798.5 20 821.0 21 888.0 22 955.0 23 1117.0 24 1279.0 25 1322.5 26 1761.0 27 2156.0 28 2199.0 29 2242.0 30 2672.5 31 3103.0 32 3598.0 33 4093.0 34 4652.0 35 5211.0 36 5592.5 37 5974.0 38 6627.5 39 7281.0 40 7890.0 41 8499.0 42 9724.5 43 10950.0 44 13496.5 45 16043.0 46 66567.0 47 117091.0 48 83036.5 49 48982.0 50 43989.0 51 38996.0 52 28719.0 53 18442.0 54 15443.5 55 12445.0 56 11292.0 57 10139.0 58 9199.0 59 8259.0 60 7557.0 61 6855.0 62 5814.0 63 4773.0 64 4006.0 65 3239.0 66 2980.0 67 2721.0 68 2124.5 69 1528.0 70 1192.5 71 857.0 72 715.5 73 574.0 74 600.5 75 457.0 76 287.0 77 217.0 78 147.0 79 101.5 80 56.0 81 33.0 82 10.0 83 8.0 84 6.0 85 3.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 353031.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.00649801292238 #Duplication Level Percentage of deduplicated Percentage of total 1 74.76337258062759 19.44333500457467 2 10.566272015335853 5.495834643416584 3 3.936347496487349 3.071118400367107 4 1.9398547015063554 2.0179530976033266 5 1.0957292699131913 1.4248040540349147 6 0.8277875200139417 1.291671269661871 7 0.6458921044319308 1.1758174211329884 8 0.6121270871682042 1.2735425500876694 9 0.487958959166113 1.1421093331747072 >10 4.939495267451612 23.087490900232556 >50 0.09149230484364619 1.6426319501686821 >100 0.07079761684329765 3.887760564936224 >500 0.004356776421126009 0.7752860230404696 >1k 0.010891941052815022 6.088417164498302 >5k 0.004356776421126009 7.705555602765762 >10k+ 0.0032675823158445066 20.476672020304164 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGC 29665 8.402944783885834 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCG 23902 6.770510238477641 No Hit GAATCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC 18722 5.303216997940691 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATCGCTGT 8549 2.4216003693726615 No Hit GCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 8026 2.273454739102232 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATCGCTGTCGTA 5371 1.5213961380162082 No Hit GAACTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCT 5257 1.4891043562746615 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTC 3998 1.1324784509009125 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCT 3929 1.1129334251099763 No Hit CCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 2597 0.7356294489719033 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGCT 2230 0.6316725726635904 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATG 1985 0.5622735680435996 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGT 1845 0.5226169939750334 No Hit TCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 1592 0.45095189940826724 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTAT 1180 0.33424826714934386 No Hit GAATGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTT 1134 0.32121824995538634 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAATCGCTG 1004 0.2843942883202891 No Hit CGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTG 807 0.22859182338094952 No Hit TGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGCTT 803 0.22745877840756193 TruSeq Adapter, Index 13 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 597 0.16910696227810024 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGC 530 0.15012845897385782 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCAATCGCTGTCG 499 0.14134736043010387 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGC 491 0.13908127048332866 No Hit GAATCTGTCTCTTATACACATCTGACGCACTCGCTGTCGTATGCCGTCTTC 489 0.13851474799663485 No Hit TCCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTG 397 0.1124547136087199 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCG 391 0.11075514614863852 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7053204959337849 0.0 2 0.0 0.0 0.0 4.403862550314279 0.0 3 0.0 0.0 0.0 5.268092603765675 0.0 4 0.0 0.0 0.0 7.871546691367047 0.0 5 0.0 0.0 0.0 15.247102945633669 0.0 6 0.0 0.0 0.0 16.254663188218597 0.0 7 0.0 0.0 0.0 18.0828312527795 0.0 8 0.0 0.0 0.0 20.21748798264175 0.0 9 0.0 0.0 0.0 20.608955020947167 0.0 10 0.0 0.0 0.0 28.73685313754316 0.0 11 0.0 0.0 0.0 30.256832969342636 0.0 12 0.0 0.0 0.0 40.727018307174156 0.0 13 0.0 0.0 0.0 41.75723944922684 0.0 14 0.0 0.0 0.0 42.28013970444522 0.0 15 0.0 0.0 0.0 44.278264515014264 0.0 16 0.0 0.0 0.0 45.308485657066946 0.0 17 0.0 0.0 0.0 46.15685308089091 0.0 18 0.0 0.0 0.0 46.83158136254323 0.0 19 0.0 0.0 0.0 50.124493316450966 0.0 20 0.0 0.0 0.0 50.9618135517844 0.0 21 0.0 0.0 0.0 51.68441298356235 0.0 22 0.0 0.0 0.0 52.50530406678167 0.0 23 0.0 0.0 0.0 53.09363766921319 0.0 24 0.0 0.0 0.0 53.6179542306483 0.0 25 0.0 0.0 0.0 54.06664004010979 0.0 26 0.0 0.0 0.0 54.52637303806181 0.0 27 0.0 0.0 0.0 55.003668233101344 0.0 28 0.0 0.0 0.0 55.38465460540292 0.0 29 0.0 0.0 0.0 55.78660230971218 0.0 30 0.0 0.0 0.0 56.24520226269081 0.0 31 0.0 0.0 0.0 56.68737306355533 0.0 32 0.0 0.0 0.0 57.06411051720671 0.0 33 0.0 0.0 0.0 57.44368058329155 0.0 34 0.0 0.0 0.0 57.80115627239534 0.0 35 0.0 0.0 0.0 58.18894091453725 0.0 36 0.0 0.0 0.0 58.563412278241856 0.0 37 0.0 0.0 0.0 58.94921409168033 0.0 38 0.0 0.0 0.0 59.36079267826338 0.0 39 0.0 0.0 0.0 59.83950417951964 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 30 2.1612123E-6 45.000004 6 CACGCCG 30 2.1612123E-6 45.000004 26 GACTTAT 35 1.2087366E-7 45.000004 23 CTTCTTG 65 0.0 45.000004 1 CGACTGA 35 1.2087366E-7 45.000004 41 AACTACT 30 2.1612123E-6 45.000004 35 CAATCTA 30 2.1612123E-6 45.000004 43 GTTTGCG 40 6.7921064E-9 45.0 1 GAGTGCT 25 3.8852966E-5 45.0 9 AGGTAAC 20 7.026639E-4 45.0 14 GATACCG 20 7.026639E-4 45.0 27 ACCGGTG 90 0.0 45.0 17 CGGCCTC 20 7.026639E-4 45.0 6 GCAACGA 20 7.026639E-4 45.0 9 TTTCGCA 20 7.026639E-4 45.0 14 AAGACGC 20 7.026639E-4 45.0 38 ACGGCTA 25 3.8852966E-5 45.0 30 TTCTTCG 25 3.8852966E-5 45.0 1 TGATTGG 25 3.8852966E-5 45.0 2 GCGATCA 20 7.026639E-4 45.0 33 >>END_MODULE