##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933853.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 235104 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.033078977814075 25.0 16.0 31.0 16.0 33.0 2 24.73285864978903 28.0 16.0 31.0 16.0 34.0 3 25.960936436640807 30.0 16.0 33.0 16.0 34.0 4 30.602529093507552 32.0 28.0 35.0 19.0 37.0 5 33.04828076085477 35.0 32.0 35.0 28.0 37.0 6 31.029506090921465 35.0 28.0 36.0 17.0 37.0 7 32.96361610181026 35.0 32.0 35.0 28.0 37.0 8 31.18406322308425 35.0 28.0 36.0 17.0 37.0 9 34.04485249081257 35.0 32.0 37.0 28.0 39.0 10 33.53583945828229 35.0 32.0 37.0 28.0 39.0 11 34.26198618483735 35.0 32.0 38.0 27.0 39.0 12 34.28129253436777 35.0 33.0 39.0 27.0 39.0 13 34.55212161426432 35.0 33.0 38.0 27.0 39.0 14 34.259038553150944 36.0 32.0 39.0 25.0 40.0 15 35.01979974819654 37.0 33.0 39.0 27.0 40.0 16 34.851882571117464 36.0 33.0 38.0 27.0 40.0 17 33.9753640941881 36.0 32.0 38.0 27.0 40.0 18 34.398891554375936 36.0 32.0 38.0 27.0 40.0 19 34.14006141962706 36.0 32.0 39.0 27.0 40.0 20 33.532866305975226 35.0 31.0 39.0 25.0 40.0 21 33.51862154620934 35.0 32.0 39.0 25.0 40.0 22 34.96076204573295 37.0 33.0 39.0 27.0 40.0 23 35.07417993738941 37.0 33.0 39.0 27.0 40.0 24 35.553418912481284 37.0 34.0 39.0 29.0 40.0 25 33.77570777187968 36.0 32.0 39.0 24.0 40.0 26 34.502543555192595 36.0 33.0 39.0 27.0 40.0 27 34.523215257928406 37.0 33.0 39.0 27.0 40.0 28 34.641805328705594 37.0 33.0 39.0 25.0 40.0 29 35.21185092554784 37.0 34.0 40.0 27.0 40.0 30 33.435207397577244 36.0 31.0 39.0 23.0 40.0 31 34.51047621478154 37.0 33.0 39.0 25.0 40.0 32 34.47924748196543 37.0 33.0 39.0 26.0 40.0 33 34.73072767796379 37.0 33.0 39.0 26.0 40.0 34 34.77927640533551 37.0 34.0 40.0 25.0 40.0 35 35.26569518170682 38.0 34.0 40.0 27.0 40.0 36 34.618870797604465 37.0 33.0 40.0 25.0 41.0 37 35.06009680822104 38.0 34.0 40.0 27.0 41.0 38 34.6167270654689 37.0 33.0 40.0 25.0 40.0 39 34.620704028855315 37.0 33.0 40.0 25.0 40.0 40 34.39708384374575 37.0 33.0 39.0 25.0 40.0 41 33.84944535184429 36.0 32.0 39.0 24.0 40.0 42 34.61976401932762 37.0 33.0 39.0 26.0 40.0 43 34.70206376752416 37.0 34.0 40.0 26.0 40.0 44 35.234449435143596 38.0 35.0 40.0 29.0 40.0 45 35.545252313869604 38.0 35.0 40.0 30.0 41.0 46 35.3748341159657 38.0 35.0 40.0 29.0 41.0 47 34.58493262556146 37.0 33.0 40.0 24.0 41.0 48 35.0386382196815 37.0 34.0 40.0 27.0 41.0 49 35.54894004355519 38.0 35.0 40.0 29.0 41.0 50 35.01184582142371 38.0 34.0 40.0 26.0 41.0 51 34.401426602694976 37.0 33.0 40.0 25.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 4.0 11 6.0 12 1.0 13 6.0 14 12.0 15 22.0 16 104.0 17 296.0 18 617.0 19 1052.0 20 1481.0 21 1733.0 22 1733.0 23 1809.0 24 1960.0 25 2436.0 26 3265.0 27 4345.0 28 5742.0 29 7610.0 30 10143.0 31 13643.0 32 18495.0 33 23126.0 34 26648.0 35 30651.0 36 31811.0 37 28648.0 38 15990.0 39 1710.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 53.5639546753777 2.976129712807949 31.253828093099223 12.206087518715123 2 13.187355383149585 40.963998911120186 30.52138628011433 15.327259425615896 3 11.753521845651287 40.773019599836665 34.257179801279435 13.216278753232613 4 13.862801143323805 2.681791887845379 66.70835034708044 16.747056621750374 5 42.11370287192051 3.777902545256567 33.94838029127535 20.160014291547572 6 14.17670477746019 34.24527017830407 36.49363685858174 15.084388185654007 7 50.07741254933986 1.3215428065877228 43.24851980400163 5.352524840070777 8 45.19319109840752 29.438461276711582 14.683289097590855 10.685058527290051 9 42.3416870831632 3.8417040969103033 14.363855995644482 39.45275282428202 10 41.70409691030352 18.652170954130938 21.629151354294272 18.014580781271267 11 35.027051857901185 18.209388185654007 28.423165918061795 18.34039403838301 12 22.409231659180616 13.764121410099362 30.292976725193952 33.533670205526064 13 23.51129712807949 20.607475840479104 42.800207567714715 13.081019463726692 14 17.969069007758268 33.85693140057166 22.202089288144823 25.97191030352525 15 8.997720157887573 21.885633591942288 46.2135905811896 22.90305566898054 16 10.915169456921191 23.769906084115966 24.133149584864572 41.181774874098274 17 12.331989247311828 30.136024908125762 35.44941812984892 22.082567714713488 18 10.61445147679325 23.385395399482782 33.91988226487002 32.08027085885396 19 12.481710221859263 28.24367088607595 27.680090513134616 31.594528378930175 20 16.985249081257656 24.000017013747108 44.80655369538587 14.208180209609363 21 19.829522253981217 37.28009731863345 25.677572478562677 17.212807948822647 22 13.135888798148903 20.617258745066014 36.69992854226215 29.54692391452293 23 16.365948686538722 35.215904450796245 26.867258745066014 21.550888117599023 24 20.753368721927316 22.757588131210017 24.531696610861577 31.95734653600109 25 12.24054035660814 41.369351435960255 21.09704641350211 25.293061793929496 26 13.946593847829044 20.166819790390637 37.289880223220365 28.59670613855996 27 24.709915611814345 26.98210153804274 23.911120185109567 24.396862665033346 28 11.578280250442358 26.604821695930315 40.867020552606505 20.949877501020826 29 25.85621682319314 15.867020552606506 33.44562406424391 24.831138559956443 30 20.69764870014972 31.637062746699335 32.936913025724785 14.72837552742616 31 24.447478562678647 21.258677011024908 26.715411052130122 27.578433374166327 32 36.44684905403566 28.515465496120868 21.227201578875732 13.81048387096774 33 23.342861031713625 17.968643664080577 25.845157887573162 32.84333741663264 34 27.16925275622703 25.341550973186333 30.72342452701783 16.765771743568802 35 34.395841840206884 17.748315639036342 23.244606642166872 24.611235878589902 36 24.176109296311417 20.42415271539404 37.79348713760719 17.606250850687356 37 34.179341908261875 18.26936164420852 32.06410779910168 15.48718864842793 38 23.590836395807813 18.71852456785082 35.177623519804 22.51301551653736 39 30.691949094868654 29.036086157615355 26.072716755138153 14.199247992377842 40 26.858326527834492 18.753828093099223 34.14361303933578 20.2442323397305 41 28.107560909214648 30.219817612631005 20.253589900639717 21.419031577514634 42 30.915679869334422 15.523768204709404 32.99603579692392 20.56451612903226 43 32.925428746427116 15.955917381244046 25.93235334149993 25.18630053082891 44 26.740931672791618 17.349768613039334 32.24062542534368 23.66867428882537 45 19.906934803321082 14.099292228120323 32.296770790798966 33.69700217775963 46 37.254151354294265 23.36370287192051 24.05999047230162 15.322155301483598 47 14.602899142507145 16.673472165509732 50.16035456648973 18.563274125493397 48 23.400707771879677 25.9897747379883 24.218643664080577 26.390873826051447 49 24.09061521709541 13.232867156662584 39.93721927317272 22.73929835306928 50 29.921226350891523 13.800275622703145 29.292143051585683 26.986354974819655 51 21.89158840342997 14.781968830815298 28.18199605281067 35.14444671294406 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 40.0 1 80.5 2 121.0 3 532.0 4 943.0 5 691.5 6 440.0 7 578.0 8 716.0 9 818.0 10 920.0 11 952.0 12 984.0 13 924.5 14 865.0 15 814.0 16 763.0 17 700.0 18 637.0 19 652.5 20 668.0 21 764.5 22 861.0 23 898.0 24 935.0 25 984.5 26 1239.5 27 1445.0 28 1551.5 29 1658.0 30 1787.5 31 1917.0 32 2133.0 33 2349.0 34 2778.0 35 3207.0 36 3549.5 37 3892.0 38 4418.0 39 4944.0 40 5541.0 41 6138.0 42 7081.0 43 8024.0 44 10060.5 45 12097.0 46 45235.5 47 78374.0 48 56681.0 49 34988.0 50 30556.5 51 26125.0 52 18449.0 53 10773.0 54 9175.5 55 7578.0 56 6851.5 57 6125.0 58 5443.5 59 4762.0 60 4257.0 61 3752.0 62 3085.0 63 2418.0 64 2036.5 65 1655.0 66 1390.5 67 1126.0 68 904.5 69 683.0 70 603.0 71 523.0 72 437.0 73 351.0 74 260.0 75 101.0 76 33.0 77 39.0 78 45.0 79 33.0 80 21.0 81 11.0 82 1.0 83 2.5 84 4.0 85 2.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 235104.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.33132571117463 #Duplication Level Percentage of deduplicated Percentage of total 1 76.31408910283332 20.094511365183067 2 10.021645720931735 5.277664352797061 3 3.500468452169418 2.7651592486729277 4 1.6767356960553097 1.7660269497754184 5 1.0289794204115918 1.3547196134476656 6 0.7947533357025168 1.2556145365455287 7 0.6736019125771331 1.2415781951817069 8 0.5072206248182729 1.0684633183612358 9 0.4409911801763965 1.0450694160881993 >10 4.815365231156915 22.58277187967878 >50 0.1227667754337221 2.287923642302981 >100 0.06946014925855329 3.4061521709541314 >500 0.009692113850030692 1.9059650197359466 >1k 0.016153523083384486 8.886280114332381 >5k 0.003230704616676897 5.327429563086975 >10k+ 0.004846056925015346 19.734670613855997 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGC 18041 7.673625289233701 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCG 17353 7.380988838981898 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTC 11003 4.680056485640397 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTGTAGGT 7286 3.099054035660814 No Hit GCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTGC 5239 2.2283755274261603 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTA 3890 1.6545869062202259 No Hit GAACTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCT 3110 1.3228188376207977 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTC 2937 1.2492343813801552 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCT 2741 1.1658670205526065 No Hit CCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTGC 1795 0.7634919014563767 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTGCT 1793 0.7626412141009936 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGT 1286 0.5469919695113652 No Hit TCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTGC 1244 0.529127535048319 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATG 1048 0.44576017422077036 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTT 1048 0.44576017422077036 No Hit TGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTGCTT 991 0.42151558459235067 Illumina Single End Adapter 2 (95% over 23bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTGTGTAGG 892 0.37940656050088467 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTAT 838 0.3564380019055397 No Hit GAATCTTTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTC 646 0.2747720157887573 No Hit CGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTG 559 0.2377671158295903 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 555 0.236065741118824 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGC 465 0.19778481012658228 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCTGTGTAGGTCG 355 0.15099700558050905 No Hit TGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTG 327 0.13908738260514497 No Hit TCCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCTG 311 0.13228188376207975 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGC 303 0.12887913434054715 No Hit GAATGACTCTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCT 290 0.12334966653055669 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCG 272 0.11569348033210833 No Hit TTCCTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGTCTTCT 267 0.11356676194365047 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATGAATGAT 259 0.11016401252211788 No Hit GAATGATACTGTCTCTTATACACATCTGACGCTGTGTAGGTCGTATGCCGT 240 0.10208248264597795 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.253436776915748E-4 0.0 0.0 0.9021539403838301 0.0 2 4.253436776915748E-4 0.0 0.0 4.6911154212603785 0.0 3 8.506873553831496E-4 0.0 0.0 5.668980536273309 0.0 4 8.506873553831496E-4 0.0 0.0 8.204879542670477 0.0 5 8.506873553831496E-4 0.0 0.0 14.827480604328297 0.0 6 8.506873553831496E-4 0.0 0.0 16.06565605008847 0.0 7 8.506873553831496E-4 0.0 0.0 18.043078807676604 0.0 8 8.506873553831496E-4 0.0 0.0 20.374812848781815 0.0 9 8.506873553831496E-4 0.0 0.0 20.83290798965564 0.0 10 8.506873553831496E-4 0.0 0.0 29.526507417993738 0.0 11 8.506873553831496E-4 0.0 0.0 31.143664080577107 0.0 12 8.506873553831496E-4 0.0 0.0 40.71815026541446 0.0 13 8.506873553831496E-4 0.0 0.0 41.605842520756774 0.0 14 8.506873553831496E-4 0.0 0.0 42.12093371444127 0.0 15 8.506873553831496E-4 0.0 0.0 44.22595957533687 0.0 16 8.506873553831496E-4 0.0 0.0 45.21318225125902 0.0 17 8.506873553831496E-4 0.0 0.0 46.03919967333606 0.0 18 8.506873553831496E-4 0.0 0.0 46.74612086565945 0.0 19 8.506873553831496E-4 0.0 0.0 50.790288553150944 0.0 20 8.506873553831496E-4 0.0 0.0 51.72391792568395 0.0 21 8.506873553831496E-4 0.0 0.0 52.299833265278345 0.0 22 8.506873553831496E-4 0.0 0.0 53.0441847012386 0.0 23 8.506873553831496E-4 0.0 0.0 53.5945794201715 0.0 24 8.506873553831496E-4 0.0 0.0 54.028429971416905 0.0 25 8.506873553831496E-4 0.0 0.0 54.38146522390091 0.0 26 8.506873553831496E-4 0.0 0.0 54.82254661766707 0.0 27 8.506873553831496E-4 0.0 0.0 55.25937457465632 0.0 28 8.506873553831496E-4 0.0 0.0 55.62134204437185 0.0 29 8.506873553831496E-4 0.0 0.0 55.98671226350891 0.0 30 8.506873553831496E-4 0.0 0.0 56.39206478834899 0.0 31 8.506873553831496E-4 0.0 0.0 56.785082346536 0.0 32 8.506873553831496E-4 0.0 0.0 57.139393630053085 0.0 33 8.506873553831496E-4 0.0 0.0 57.46988566761944 0.0 34 8.506873553831496E-4 0.0 0.0 57.77740914659044 0.0 35 8.506873553831496E-4 0.0 0.0 58.11938546345447 0.0 36 8.506873553831496E-4 0.0 0.0 58.43541581597931 0.0 37 8.506873553831496E-4 0.0 0.0 58.76803457193412 0.0 38 8.506873553831496E-4 0.0 0.0 59.09044507962434 0.0 39 8.506873553831496E-4 0.0 0.0 59.40137130801688 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAC 35 1.2064265E-7 45.000004 34 TGGGACG 65 0.0 45.000004 6 CGTTTTT 370 0.0 45.000004 1 TAATCAC 20 7.0218305E-4 45.0 45 CTTGTCG 20 7.0218305E-4 45.0 1 AGCGTTA 25 3.8813116E-5 45.0 25 GGGTGGC 25 3.8813116E-5 45.0 7 AATTTTC 25 3.8813116E-5 45.0 36 TACCATG 20 7.0218305E-4 45.0 25 CGAAAGG 20 7.0218305E-4 45.0 11 TCTCTCG 40 6.7757355E-9 45.0 1 CGAAAAA 20 7.0218305E-4 45.0 22 CTTTTCG 20 7.0218305E-4 45.0 1 TTTGTCG 40 6.7757355E-9 45.0 1 TTTCGCG 55 1.8189894E-12 45.0 1 CATTGGG 20 7.0218305E-4 45.0 3 GATCCAC 25 3.8813116E-5 45.0 35 GCGTTTG 25 3.8813116E-5 45.0 1 TACGGGG 20 7.0218305E-4 45.0 4 GCTTGCG 25 3.8813116E-5 45.0 1 >>END_MODULE