##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933850.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 443930 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.971491000833463 25.0 16.0 31.0 16.0 33.0 2 24.71251773928322 28.0 16.0 31.0 16.0 34.0 3 25.86178226296939 30.0 16.0 33.0 16.0 34.0 4 30.514430202959925 32.0 28.0 35.0 19.0 37.0 5 33.0406865947334 35.0 32.0 35.0 28.0 37.0 6 30.983801500236524 35.0 28.0 35.0 17.0 37.0 7 33.025573851733384 35.0 32.0 35.0 28.0 37.0 8 31.52756290406145 35.0 28.0 36.0 17.0 37.0 9 34.05320883923141 35.0 32.0 37.0 28.0 39.0 10 33.399087694005814 34.0 32.0 37.0 27.0 39.0 11 34.23335886288379 35.0 32.0 38.0 27.0 39.0 12 34.35040434302705 35.0 33.0 39.0 27.0 39.0 13 34.557434730700784 35.0 33.0 37.0 29.0 39.0 14 34.38275629040614 36.0 32.0 38.0 27.0 40.0 15 34.97887054265312 37.0 33.0 39.0 27.0 40.0 16 34.47528213907598 36.0 32.0 38.0 27.0 40.0 17 33.92519766629874 36.0 32.0 38.0 27.0 40.0 18 34.31261685400852 36.0 32.0 38.0 27.0 40.0 19 34.0437704142545 36.0 32.0 39.0 27.0 40.0 20 33.6404613339941 35.0 31.0 39.0 25.0 40.0 21 33.77718784493051 36.0 32.0 39.0 25.0 40.0 22 35.0949699276913 37.0 33.0 39.0 28.0 40.0 23 35.280113981934086 37.0 33.0 39.0 29.0 40.0 24 35.58499087694006 37.0 34.0 39.0 29.0 40.0 25 33.75183700132904 36.0 32.0 39.0 24.0 40.0 26 34.73298943527133 37.0 33.0 39.0 27.0 40.0 27 34.87075214560854 37.0 33.0 39.0 27.0 40.0 28 34.9273534115739 37.0 33.0 39.0 27.0 40.0 29 35.32672042889645 37.0 34.0 40.0 27.0 40.0 30 33.87688824814723 37.0 32.0 39.0 24.0 40.0 31 34.44627981889037 37.0 32.0 39.0 25.0 40.0 32 34.81996936453945 37.0 33.0 39.0 27.0 40.0 33 35.18788097222535 37.0 34.0 39.0 27.0 40.0 34 35.28140472597031 38.0 34.0 40.0 28.0 40.0 35 35.346833960309056 38.0 34.0 40.0 27.0 40.0 36 35.226738449755594 38.0 34.0 40.0 27.0 41.0 37 35.86727637240105 38.0 35.0 40.0 30.0 41.0 38 35.254999662108894 37.0 34.0 40.0 29.0 40.0 39 35.25066114026986 37.0 34.0 40.0 29.0 40.0 40 34.78165476539094 37.0 33.0 39.0 27.0 40.0 41 34.190187642195845 36.0 33.0 39.0 25.0 40.0 42 35.00265131890163 37.0 34.0 40.0 27.0 40.0 43 35.152145608541886 37.0 34.0 40.0 28.0 40.0 44 35.916284098844415 38.0 35.0 40.0 31.0 40.0 45 36.052976820669926 38.0 35.0 40.0 31.0 41.0 46 35.76760074786566 38.0 35.0 40.0 30.0 41.0 47 35.03895433964814 37.0 34.0 40.0 26.0 41.0 48 35.492428986551936 37.0 34.0 40.0 29.0 41.0 49 35.76189939855383 38.0 35.0 40.0 30.0 41.0 50 35.312700200482055 38.0 34.0 40.0 28.0 41.0 51 35.11289392471786 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 5.0 12 6.0 13 6.0 14 17.0 15 34.0 16 77.0 17 228.0 18 631.0 19 1345.0 20 1991.0 21 2433.0 22 2589.0 23 2559.0 24 3052.0 25 4013.0 26 5536.0 27 7534.0 28 10073.0 29 13682.0 30 18767.0 31 25478.0 32 34695.0 33 44728.0 34 54131.0 35 62434.0 36 63788.0 37 54583.0 38 27226.0 39 2279.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 53.22708535129412 3.100939337282905 33.44671457211722 10.225260739305748 2 13.458878652039735 39.29786227558399 31.111887009213163 16.13137206316311 3 11.450904421868312 39.36386367220057 35.245421575473614 13.939810330457506 4 13.803978104656139 2.7141666478949387 66.02302164755704 17.458833599891875 5 40.29666839366567 2.9184781384452503 35.34048160746063 21.444371860428447 6 13.656432320410875 32.185930214222964 38.02468857702791 16.13294888833825 7 50.767688599553985 1.033946793413376 42.38370914333341 5.814655463699232 8 44.530218728177864 27.222084562881538 16.13137206316311 12.116324645777487 9 42.505575203297816 2.9396526479399903 16.24220034690154 38.312571801860656 10 41.229022593652154 13.76951321154236 25.35670038069065 19.64476381411484 11 32.44362849998873 18.4986371725272 29.027098866938484 20.030635460545582 12 19.61119996395828 14.57707296195346 32.40037843804203 33.41134863604622 13 21.713107922420203 20.896988263915482 44.57910030860721 12.810803505057104 14 19.252359606244227 31.456986461829565 23.964138490302524 25.32651544162368 15 8.653616561169555 22.879057509066744 46.72988984749848 21.737436082265223 16 9.536413398508774 24.658842610321447 23.89498344333566 41.90976054783412 17 11.930935057328858 29.393372829049625 35.68468001711982 22.991012096501702 18 10.760029734417587 23.72513684589913 34.37050886401009 31.14432455567319 19 11.40810488140022 28.583560471245466 28.666681684049287 31.341652963305027 20 14.344829139729237 25.887865203973597 45.436217421665575 14.331088234631586 21 18.479490009686213 36.71772576757597 27.01506994345955 17.787714279278262 22 11.883855562813956 21.725497263082016 36.133624670556166 30.25702250354786 23 15.031198612393846 34.870587705268846 27.801680445115224 22.296533237222086 24 21.407429099182306 22.79188160295542 23.256143986664565 32.54454531119771 25 11.393237672606041 40.72488905908589 20.1216407992251 27.76023246908296 26 17.519653999504424 20.054287838172684 31.52524046583921 30.900817696483678 27 20.565404455657426 27.545784245263892 21.724596220124795 30.164215078953887 28 11.82010677359043 23.790687721037102 38.07965219741851 26.30955330795396 29 25.45153515193837 14.639244926001846 24.955736264726422 34.953483657333365 30 13.367873313360215 28.619827450273693 29.76415200594688 28.248147230419214 31 21.159867546685287 18.328340053612056 29.06066271709504 31.451129682607622 32 21.048814002207557 32.52292028022436 18.344108305363456 28.084157412204625 33 12.600860496024147 15.995314576622441 25.80789764152006 45.595927285833355 34 27.935935845741444 20.265582411641475 30.450521478611492 21.347960264005586 35 13.635257810916135 23.51789696573784 23.416980154528865 39.42986506881716 36 23.76568377897416 18.268645957696034 35.30511567138963 22.660554591940173 37 11.280382042213862 17.537674858648884 35.387561101975535 35.794381997161715 38 15.542315229878584 21.231725722523823 29.59655801590341 33.62940103169419 39 19.0318293424639 18.95659225553578 34.33491766719978 27.676660734800528 40 15.064987723289708 24.552970062847745 27.05561687653459 33.32642533732796 41 15.594125199918906 22.75764197058095 38.35694816750389 23.29128466199626 42 16.113351204018652 24.437636564323203 34.73768386907846 24.711328362579685 43 24.534723942963982 16.071002185029172 30.84382672943933 28.55044714256752 44 19.181177212623613 15.069943459554432 33.898137093685946 31.850742234136014 45 16.347847633635933 14.49935800689298 31.051066609600614 38.10172774987047 46 29.938278557430227 21.44932759669317 26.59203027504336 22.02036357083324 47 10.623746987137611 15.27830964341225 48.846214493275966 25.251728876174173 48 19.306422183677608 21.92124884553871 29.141756583245105 29.630572387538578 49 16.093753519699053 15.496587299799518 43.75261865609443 24.657040524407 50 23.987340346451017 12.508503592908793 33.690446692046045 29.81370936859415 51 18.33825152614151 13.551460815894398 27.844479985583316 40.26580767238078 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 63.0 1 159.0 2 255.0 3 976.0 4 1697.0 5 1167.0 6 637.0 7 812.0 8 987.0 9 1235.5 10 1484.0 11 1558.0 12 1632.0 13 1615.0 14 1598.0 15 1519.0 16 1440.0 17 1410.0 18 1380.0 19 1309.5 20 1239.0 21 1353.0 22 1467.0 23 1464.0 24 1461.0 25 1658.5 26 2120.5 27 2385.0 28 2395.5 29 2406.0 30 2682.5 31 2959.0 32 3517.0 33 4075.0 34 4864.5 35 5654.0 36 6369.0 37 7084.0 38 7453.0 39 7822.0 40 9009.0 41 10196.0 42 12105.0 43 14014.0 44 18106.0 45 22198.0 46 88262.5 47 154327.0 48 113398.5 49 72470.0 50 63592.5 51 54715.0 52 39196.0 53 23677.0 54 19013.5 55 14350.0 56 11825.0 57 9300.0 58 7896.5 59 6493.0 60 5691.0 61 4889.0 62 3970.0 63 3051.0 64 2468.0 65 1885.0 66 1486.0 67 1087.0 68 842.5 69 598.0 70 506.5 71 415.0 72 379.0 73 343.0 74 284.5 75 158.5 76 91.0 77 56.0 78 21.0 79 11.0 80 1.0 81 1.0 82 1.0 83 0.5 84 0.0 85 0.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443930.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.077999055328743 #Duplication Level Percentage of deduplicated Percentage of total 1 75.6238851307419 20.477434901305184 2 11.194218168316187 6.0623405797361904 3 4.068329315351794 3.304866520735863 4 2.017785462739417 2.18550371415656 5 1.1902636985520332 1.611497965249202 6 0.7765238293603511 1.2616026910715905 7 0.5982521703912723 1.1339630193292267 8 0.46269776728820367 1.0023143764426157 9 0.3999437572734139 0.9746709013470717 >10 3.43047739256378 16.589103849230018 >50 0.12132175907091546 2.2885037912661734 >100 0.09287389832325252 5.254881391409526 >500 0.00669361429356775 1.275771195784558 >1k 0.009203719653655655 5.229053311793217 >5k 0.003346807146783875 5.819700711439877 >10k+ 0.004183508933479843 25.52879107970312 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGC 35767 8.05690086274863 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCG 29256 6.590228189128916 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC 24002 5.406708264816525 No Hit GCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC 11848 2.6688892392944834 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTCCTATT 11806 2.659428288243642 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTA 7369 1.6599463879440453 No Hit GAACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT 7157 1.612191111211227 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTC 5802 1.3069628094519405 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCT 5359 1.207172301939495 No Hit CTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGCT 3717 0.8372941679994593 No Hit CCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC 3274 0.7375036604870138 No Hit TCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC 3083 0.6944788592796162 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGT 2670 0.6014461739463429 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATG 2184 0.4919694546437502 No Hit TGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGCTT 1705 0.3840695605162976 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTAT 1608 0.3622192688036402 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCTCCTAT 1406 0.3167165994638794 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTT 1292 0.29103687518302435 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1074 0.24193003401437163 No Hit CGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG 1067 0.24035320883923142 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGC 877 0.1975536683711396 No Hit TCCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG 749 0.16872029374000405 No Hit TTCCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT 717 0.1615119500822202 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGCTCCTATTCG 716 0.1612866893429144 No Hit TTTCCCGGGTTCATTAGGAAGTACTGCCTAGCCCTGCTATTCAGCATTATA 700 0.15768251751402249 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGC 662 0.14912260942040412 No Hit TGCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG 655 0.1475457842452639 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCC 555 0.12501971031468925 No Hit GCACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCT 479 0.10789989412745252 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCG 473 0.10654832969161805 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC 451 0.10159259342689163 No Hit GACTCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTC 446 0.1004662897303629 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.252607393057464E-4 0.0 0.0 0.9341562859009304 0.0 2 2.252607393057464E-4 0.0 0.0 5.325389137927151 0.0 3 2.252607393057464E-4 0.0 0.0 6.424436284999888 0.0 4 2.252607393057464E-4 0.0 0.0 9.647241682247202 0.0 5 2.252607393057464E-4 0.0 0.0 17.536773815691664 0.0 6 2.252607393057464E-4 0.0 0.0 18.861757484288063 0.0 7 2.252607393057464E-4 0.0 0.0 21.12269952469984 0.0 8 2.252607393057464E-4 0.0 0.0 23.887324578199266 0.0 9 2.252607393057464E-4 0.0 0.0 24.46264050638614 0.0 10 2.252607393057464E-4 0.0 0.0 32.726555988556754 0.0 11 2.252607393057464E-4 0.0 0.0 35.1861780010362 0.0 12 2.252607393057464E-4 0.0 0.0 45.817583853310204 0.0 13 2.252607393057464E-4 0.0 0.0 46.934877120266705 0.0 14 2.252607393057464E-4 0.0 0.0 47.50343522627441 0.0 15 2.252607393057464E-4 0.0 0.0 49.642060685243166 0.0 16 2.252607393057464E-4 0.0 0.0 50.93145315702926 0.0 17 2.252607393057464E-4 0.0 0.0 52.1167751672561 0.0 18 2.252607393057464E-4 0.0 0.0 53.09981303358638 0.0 19 2.252607393057464E-4 0.0 0.0 56.87270515621832 0.0 20 2.252607393057464E-4 0.0 0.0 57.894713130448494 0.0 21 4.505214786114928E-4 0.0 0.0 58.8631090487239 0.0 22 6.757822179172393E-4 0.0 0.0 59.93805329669092 0.0 23 6.757822179172393E-4 0.0 0.0 60.96524226792512 0.0 24 6.757822179172393E-4 0.0 0.0 61.72166783051382 0.0 25 6.757822179172393E-4 0.0 0.0 62.335052823643366 0.0 26 6.757822179172393E-4 0.0 0.0 62.92118126731692 0.0 27 6.757822179172393E-4 0.0 0.0 63.48568468001712 0.0 28 6.757822179172393E-4 0.0 0.0 64.06257743337913 0.0 29 6.757822179172393E-4 0.0 0.0 64.64149753339491 0.0 30 6.757822179172393E-4 0.0 0.0 65.25443200504584 0.0 31 6.757822179172393E-4 0.0 0.0 65.78807469646115 0.0 32 6.757822179172393E-4 0.0 0.0 66.22620683441083 0.0 33 6.757822179172393E-4 0.0 0.0 66.69249656477372 0.0 34 6.757822179172393E-4 0.0 0.0 67.14639695447481 0.0 35 6.757822179172393E-4 0.0 0.0 67.6559367467844 0.0 36 6.757822179172393E-4 0.0 0.0 68.14475255107787 0.0 37 6.757822179172393E-4 0.0 0.0 68.565539612101 0.0 38 6.757822179172393E-4 0.0 0.0 69.01561056923389 0.0 39 6.757822179172393E-4 0.0 0.0 69.46432996193093 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTTCG 55 1.8189894E-12 45.000004 12 ATGGGCG 25 3.8869235E-5 45.0 5 ACCGGTC 25 3.8869235E-5 45.0 17 CCGGGAT 35 1.2096825E-7 45.0 5 GACGTGT 20 7.0286036E-4 45.0 26 TATGGGA 35 1.2096825E-7 45.0 4 TAGCGGT 20 7.0286036E-4 45.0 3 CCTCGCT 20 7.0286036E-4 45.0 26 CGTTAGG 20 7.0286036E-4 45.0 2 AGCGGTA 20 7.0286036E-4 45.0 4 ACGATAC 20 7.0286036E-4 45.0 3 GTTAAAT 20 7.0286036E-4 45.0 10 AACGCTT 20 7.0286036E-4 45.0 19 ACGTGTA 20 7.0286036E-4 45.0 27 GCCCTCG 20 7.0286036E-4 45.0 24 GTCGTTG 20 7.0286036E-4 45.0 1 TCGTCCG 20 7.0286036E-4 45.0 1 GGTATAT 20 7.0286036E-4 45.0 8 AACGATA 20 7.0286036E-4 45.0 2 CGGGATC 35 1.2096825E-7 45.0 6 >>END_MODULE