##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933845.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 881224 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.029505551369457 28.0 16.0 31.0 16.0 34.0 2 25.98228146305593 30.0 16.0 33.0 16.0 34.0 3 27.05788426098245 31.0 23.0 33.0 16.0 34.0 4 31.328649696331468 35.0 28.0 35.0 19.0 37.0 5 33.35437641280764 35.0 32.0 35.0 28.0 37.0 6 31.651931858415114 35.0 28.0 37.0 17.0 37.0 7 33.19886771127432 35.0 32.0 35.0 28.0 37.0 8 32.275652955434715 35.0 32.0 37.0 19.0 37.0 9 34.264938313073635 35.0 32.0 39.0 28.0 39.0 10 33.38694248000508 35.0 32.0 37.0 27.0 39.0 11 34.07607259902136 35.0 32.0 38.0 27.0 39.0 12 34.24648443528547 35.0 32.0 39.0 27.0 39.0 13 34.56183898758999 35.0 33.0 38.0 27.0 39.0 14 34.44935339936271 37.0 32.0 39.0 27.0 40.0 15 35.00939261754105 37.0 33.0 39.0 27.0 40.0 16 34.608882645048254 36.0 32.0 39.0 27.0 40.0 17 34.10062481276044 36.0 32.0 38.0 27.0 40.0 18 34.446983967753944 36.0 32.0 39.0 27.0 40.0 19 34.23581404954926 36.0 32.0 39.0 27.0 40.0 20 34.13350861982878 36.0 32.0 39.0 25.0 40.0 21 33.88912921118808 36.0 32.0 39.0 25.0 40.0 22 35.06843776383757 37.0 33.0 39.0 27.0 40.0 23 35.47571446079544 37.0 34.0 39.0 29.0 40.0 24 35.7380189372963 38.0 34.0 39.0 30.0 40.0 25 33.67009069203744 36.0 32.0 39.0 24.0 40.0 26 34.60166768040816 37.0 33.0 39.0 27.0 40.0 27 34.898875881728145 37.0 33.0 39.0 27.0 40.0 28 35.03414341869944 37.0 33.0 39.0 27.0 40.0 29 35.51724306192296 38.0 34.0 40.0 28.0 40.0 30 33.47716471634908 36.0 31.0 39.0 23.0 40.0 31 34.48025700616415 37.0 33.0 39.0 25.0 40.0 32 34.88838138770619 37.0 33.0 39.0 27.0 40.0 33 35.32678410937514 38.0 34.0 39.0 28.0 40.0 34 35.59449016368143 38.0 35.0 40.0 29.0 40.0 35 35.58192695614282 38.0 35.0 40.0 28.0 41.0 36 35.56492219912304 38.0 35.0 40.0 28.0 41.0 37 35.64697398164371 38.0 35.0 40.0 29.0 41.0 38 35.436158116438044 38.0 34.0 40.0 29.0 41.0 39 35.335738699808445 38.0 34.0 40.0 29.0 41.0 40 34.95087060724629 37.0 33.0 40.0 27.0 40.0 41 34.39606501865587 37.0 33.0 39.0 25.0 40.0 42 35.41743642933012 38.0 35.0 40.0 29.0 40.0 43 35.509839722930835 38.0 35.0 40.0 30.0 40.0 44 36.03560388732036 38.0 35.0 40.0 30.0 41.0 45 36.37124386081178 39.0 35.0 40.0 31.0 41.0 46 36.114532740824124 38.0 35.0 40.0 31.0 41.0 47 35.58556053852369 38.0 35.0 40.0 28.0 41.0 48 35.99457799606002 38.0 35.0 40.0 30.0 41.0 49 36.20846912930197 39.0 35.0 40.0 31.0 41.0 50 35.83654439733825 38.0 35.0 40.0 29.0 41.0 51 35.41421590878142 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 12.0 10 9.0 11 16.0 12 14.0 13 23.0 14 31.0 15 51.0 16 163.0 17 457.0 18 1223.0 19 2462.0 20 3685.0 21 4430.0 22 4812.0 23 4970.0 24 5929.0 25 7961.0 26 10701.0 27 13828.0 28 18241.0 29 24283.0 30 33410.0 31 45445.0 32 62454.0 33 81292.0 34 101681.0 35 123197.0 36 133071.0 37 123899.0 38 67264.0 39 6209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.26315216108504 3.238904069793832 39.69796555699799 10.799978212123138 2 15.697484408050622 30.841534048096737 36.042708777790885 17.41827276606175 3 13.984753025337485 30.932543825406476 38.90248109447768 16.180222054778355 4 14.250406253120659 3.185115248790319 63.39738817826115 19.167090319827874 5 35.11354661243906 3.676363784917342 39.861488111989686 21.34860149065391 6 15.530444018773887 26.11696912476283 43.19979936996723 15.152787486496056 7 59.61628371446987 1.373430591994771 34.18154748395414 4.828738209581219 8 56.034334062621994 21.557628934300475 13.191084219222354 9.216952783855183 9 53.28179895236625 2.978130418599584 13.735667662251597 30.004402966782568 10 40.85658130055469 16.200421232286004 23.92592575780959 19.01707170934972 11 32.63914736775212 20.557202255045258 26.53944967454359 20.26420070265903 12 21.043798171634002 15.490726534910534 32.21598594681942 31.249489346636043 13 23.169364429475365 20.067201982696794 41.71481938757909 15.048614200248744 14 21.003059381042732 29.10258912603379 25.94209871723875 23.95225277568473 15 13.078513522101076 22.75403302679001 42.85085290459633 21.31660054651258 16 14.201723965756722 23.909925285738925 25.40489137835556 36.48345937014879 17 15.185015387688033 28.11067333617786 34.46921554565014 22.235095730483962 18 14.91992955253148 23.57323450110301 33.12517589171426 28.38166005465126 19 15.007648452606828 28.71347126269825 28.18284567828384 28.096034606411084 20 17.47194810853994 25.76200829754977 41.41671130155329 15.349332292356992 21 19.646196653745246 34.156241772806915 28.093538078853957 18.104023494593882 22 14.681057256724737 21.636042595299266 35.36501502455675 28.317885123419245 23 17.088163735894618 32.431935580510746 28.602943179032803 21.876957504561837 24 21.28176263923815 23.224401514257444 25.586570497399073 29.907265349105334 25 13.845287917714453 37.30186649478453 21.934718073951686 26.918127513549333 26 15.173327099579675 22.001783882418092 31.671629460840826 31.1532595571614 27 20.16774395613374 29.863689595380972 24.79290169128394 25.17566475720135 28 11.354774722431527 25.582598749012735 37.35599575136401 25.706630777191723 29 18.373875427814042 20.020335351738037 29.36880974644358 32.23697947400434 30 14.698079035523318 32.794272511869856 30.952402567338154 21.555245885268672 31 19.149387669877353 20.597714088585874 31.79373235408931 28.45916588744746 32 19.634735322687536 29.441209045600207 26.713979646491698 24.210075985220556 33 17.586220983541075 19.88631721333055 24.705750183835214 37.82171161929316 34 20.37041660236217 19.95236171506904 31.412898423102416 28.26432325946638 35 15.759330204352128 24.60532168892359 24.73037502383049 34.90497308289379 36 19.876898495728668 21.80512559803183 27.689781485751634 30.628194420487866 37 13.679268835165633 26.729980118562363 38.90361587973092 20.687135166541086 38 17.87218686735722 21.189958512251142 29.563084981798042 31.37476963859359 39 20.01432098989587 19.679559340190462 39.25721496464009 21.048904705273575 40 15.761259339282635 19.566080814866595 28.08480023240402 36.58785961344675 41 21.730797163944697 22.407923524552213 30.183699036794277 25.677580274708816 42 18.016645030094505 17.704011692827248 33.204837816491604 31.07450546058664 43 28.034529245685547 18.169273646655107 23.648243806342087 30.14795330131726 44 19.341620291775985 20.096933356331647 32.964830735431626 27.59661561646074 45 16.892072844134976 15.513989632601927 31.018674026127297 36.5752634971358 46 27.675937105662126 21.970236852378054 28.560502210561673 21.793323831398144 47 12.537107477780904 18.202295897524355 44.05372527302933 25.20687135166541 48 19.11999673181847 23.252771145588408 29.259870362132673 28.36736176046045 49 17.431776710575292 15.081182537016696 40.42502246874801 27.06201828366 50 25.282901963632405 14.89825515419462 30.516985465670476 29.301857416502504 51 18.27730520276343 15.49322306246766 27.92990204533694 38.29956968943197 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 66.0 1 243.5 2 421.0 3 2392.5 4 4364.0 5 3102.5 6 1841.0 7 1941.0 8 2041.0 9 2175.0 10 2309.0 11 2429.5 12 2550.0 13 2433.0 14 2316.0 15 2294.5 16 2273.0 17 2232.5 18 2192.0 19 2216.0 20 2240.0 21 2292.0 22 2344.0 23 2718.5 24 3093.0 25 3388.5 26 4154.0 27 4624.0 28 5548.0 29 6472.0 30 7329.5 31 8187.0 32 9565.5 33 10944.0 34 12741.5 35 14539.0 36 15859.0 37 17179.0 38 19761.0 39 22343.0 40 25622.0 41 28901.0 42 33377.0 43 37853.0 44 44804.0 45 51755.0 46 151308.5 47 250862.0 48 189558.0 49 128254.0 50 114957.0 51 101660.0 52 77053.0 53 52446.0 54 43901.0 55 35356.0 56 29957.0 57 24558.0 58 21345.0 59 18132.0 60 15740.0 61 13348.0 62 11249.5 63 9151.0 64 7205.5 65 5260.0 66 4297.0 67 3334.0 68 2587.0 69 1840.0 70 1506.5 71 1173.0 72 906.0 73 639.0 74 496.0 75 261.0 76 169.0 77 126.5 78 84.0 79 59.0 80 34.0 81 23.0 82 12.0 83 18.5 84 25.0 85 13.5 86 2.0 87 1.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 881224.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.34043888443679 #Duplication Level Percentage of deduplicated Percentage of total 1 74.28416566974701 23.28098354254083 2 11.731258675956841 7.353255911426884 3 4.297462534737862 4.0405308578432635 4 2.073475166148672 2.5993448689231946 5 1.224640280079658 1.9190381926628042 6 0.8759022852765603 1.6470697224269133 7 0.6769047315643583 1.4850143959125202 8 0.5140808063209933 1.2889214473732062 9 0.4737430062726726 1.3362582361516242 >10 3.67880540404393 19.885801215837354 >50 0.09395612312811297 2.0100524040955827 >100 0.05982362439767295 3.743470943442801 >500 0.007707338112583625 1.6242603531220086 >1k 0.004404193207190643 3.5437884866040616 >5k 0.0011010483017976607 2.391703528253376 >10k+ 0.002569112704194542 21.85050589338356 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC 54874 6.227020598621917 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG 43676 4.956288072045246 No Hit GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC 35217 3.996373226330649 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATTCTCGT 17542 1.9906402912312875 No Hit GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 16948 1.9232340471889102 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTA 10936 1.2410011529418172 No Hit GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT 10771 1.2222771962633792 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTC 8482 0.9625248517970459 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCT 7232 0.8206766951422114 No Hit CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT 5079 0.5763574301199241 No Hit CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 4353 0.4939720207347962 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGT 3938 0.4468784327253911 No Hit TCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 3934 0.4464245186240956 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATG 3548 0.40262180784908264 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2501 0.28380979183499316 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTAT 2478 0.2811997857525442 No Hit GAATGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTT 2192 0.248744927509918 No Hit TGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCTT 2048 0.23240401986328105 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCATTCTCG 2010 0.2280918359009741 No Hit CGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1668 0.18928218024021135 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCATTCTCGTCG 1094 0.12414550670431128 No Hit TCCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 1045 0.11858505896344175 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC 977 0.11086851924141876 No Hit TGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 974 0.11052808366544715 No Hit TTCCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT 968 0.10984721251350393 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCC 915 0.10383285067133896 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6487567292765517 0.0 2 0.0 0.0 0.0 3.710974735141122 0.0 3 0.0 0.0 0.0 4.518147485769793 0.0 4 0.0 0.0 0.0 6.896203462456764 0.0 5 0.0 0.0 0.0 12.774844988334408 0.0 6 0.0 0.0 0.0 13.83144353762494 0.0 7 0.0 0.0 0.0 15.481648252884623 0.0 8 0.0 0.0 0.0 17.643187203253657 0.0 9 0.0 0.0 0.0 18.14532967781177 0.0 10 0.0 0.0 0.0 24.52327671511443 0.0 11 0.0 0.0 0.0 26.63397728613837 0.0 12 0.0 0.0 0.0 35.02106161430011 0.0 13 0.0 0.0 0.0 36.032495710511746 0.0 14 0.0 0.0 0.0 36.51194248000508 0.0 15 0.0 0.0 0.0 38.20118380797618 0.0 16 0.0 0.0 0.0 39.35287736148811 0.0 17 0.0 0.0 0.0 40.536798816192025 0.0 18 0.0 0.0 0.0 41.61416393561682 0.0 19 0.0 0.0 0.0 44.69862373244487 0.0 20 0.0 0.0 0.0 45.734682668651786 0.0 21 0.0 0.0 0.0 46.862205296269735 0.0 22 0.0 0.0 0.0 48.11841257160495 0.0 23 0.0 0.0 0.0 49.39958512251142 0.0 24 0.0 0.0 0.0 50.3057111472225 0.0 25 0.0 0.0 0.0 51.08746470817862 0.0 26 0.0 0.0 0.0 51.822351638175995 0.0 27 0.0 0.0 0.0 52.544188537761116 0.0 28 0.0 0.0 0.0 53.28077764563834 0.0 29 0.0 0.0 0.0 54.007721078863035 0.0 30 0.0 0.0 0.0 54.740678873929895 0.0 31 0.0 0.0 0.0 55.44730965112162 0.0 32 0.0 0.0 0.0 56.14588345301535 0.0 33 0.0 0.0 0.0 56.831066788920864 0.0 34 0.0 0.0 0.0 57.48561092298893 0.0 35 0.0 0.0 0.0 58.1225658856318 0.0 36 0.0 0.0 0.0 58.7691665229272 0.0 37 0.0 0.0 0.0 59.38978057792343 0.0 38 0.0 0.0 0.0 60.03649469374415 0.0 39 0.0 0.0 0.0 60.78397774005247 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGGGA 25 3.8900616E-5 45.000004 4 CCGTTCG 25 3.8900616E-5 45.000004 1 GTACGAG 25 3.8900616E-5 45.000004 1 CTCACGT 20 7.03239E-4 45.0 13 GTTTACG 20 7.03239E-4 45.0 1 CGCGCCA 20 7.03239E-4 45.0 41 TTCGTCG 40 6.8121153E-9 45.0 1 GTTAGCG 20 7.03239E-4 45.0 1 CCTCACG 20 7.03239E-4 45.0 12 AACGCAG 40 6.8121153E-9 45.0 42 AGACACG 20 7.03239E-4 45.0 24 CAGTCGA 20 7.03239E-4 45.0 26 ACGAGCG 20 7.03239E-4 45.0 42 TTTTACG 45 3.8380676E-10 45.0 1 TACGGCT 6430 0.0 44.300156 7 ACGGCTG 6435 0.0 44.26573 8 GCGACTG 1465 0.0 43.924915 11 TCGGGAA 205 0.0 43.90244 5 GGCGACT 1490 0.0 43.640938 10 CGTTTTT 1815 0.0 43.512398 1 >>END_MODULE