##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933844.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 581256 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.65287412086929 28.0 16.0 31.0 16.0 33.0 2 25.441206628404696 28.0 16.0 31.0 16.0 34.0 3 26.515308229076346 30.0 16.0 33.0 16.0 34.0 4 31.03641940900395 33.0 28.0 35.0 19.0 37.0 5 33.250414619375974 35.0 32.0 35.0 28.0 37.0 6 31.513519000233977 35.0 28.0 36.0 17.0 37.0 7 33.17679645457423 35.0 32.0 35.0 28.0 37.0 8 31.96058535309743 35.0 31.0 37.0 17.0 37.0 9 34.20669205995293 35.0 32.0 39.0 28.0 39.0 10 33.7341498410339 35.0 32.0 37.0 27.0 39.0 11 34.424109170485984 35.0 32.0 39.0 27.0 39.0 12 34.581862380775426 37.0 34.0 39.0 27.0 39.0 13 34.78561941726193 37.0 34.0 39.0 30.0 39.0 14 34.71432380913057 37.0 33.0 39.0 27.0 40.0 15 35.25953280482266 37.0 33.0 39.0 27.0 40.0 16 34.64885867844805 36.0 32.0 39.0 27.0 40.0 17 34.25915947534305 36.0 32.0 38.0 27.0 40.0 18 34.506907455578954 36.0 32.0 39.0 27.0 40.0 19 34.22599336608999 36.0 32.0 39.0 27.0 40.0 20 34.278011753857164 36.0 32.0 39.0 27.0 40.0 21 34.213859297796496 37.0 32.0 39.0 26.0 40.0 22 35.45855870735098 37.0 34.0 39.0 30.0 40.0 23 35.81068754559093 37.0 34.0 39.0 30.0 40.0 24 36.10279807864349 38.0 35.0 40.0 30.0 40.0 25 33.88330270999353 36.0 32.0 39.0 24.0 40.0 26 34.99934452289525 37.0 33.0 39.0 27.0 40.0 27 35.15745041771612 37.0 33.0 39.0 29.0 40.0 28 35.25939861265948 37.0 34.0 39.0 27.0 40.0 29 35.600226062182585 38.0 34.0 40.0 29.0 40.0 30 33.418590087672214 36.0 31.0 39.0 23.0 40.0 31 34.278336911791015 36.0 32.0 39.0 25.0 40.0 32 34.78456480449234 37.0 33.0 39.0 27.0 40.0 33 35.38984371774227 37.0 34.0 39.0 30.0 40.0 34 35.405766134027004 38.0 34.0 40.0 29.0 40.0 35 35.63751427942249 38.0 35.0 40.0 30.0 40.0 36 35.55756843800322 38.0 34.0 40.0 29.0 41.0 37 35.66866922664024 38.0 35.0 40.0 30.0 41.0 38 35.64932663060682 38.0 35.0 40.0 30.0 41.0 39 35.4307310376151 38.0 34.0 40.0 29.0 40.0 40 35.19386466548303 37.0 33.0 40.0 28.0 40.0 41 34.46113416463658 37.0 33.0 39.0 26.0 40.0 42 35.494258983993284 38.0 35.0 40.0 30.0 40.0 43 35.37127530726565 38.0 34.0 40.0 30.0 40.0 44 36.09377795670066 38.0 35.0 40.0 31.0 41.0 45 36.44188103004528 39.0 35.0 40.0 32.0 41.0 46 36.182549513467386 38.0 35.0 40.0 31.0 41.0 47 35.58524987268949 38.0 34.0 40.0 27.0 41.0 48 35.88813362786793 38.0 35.0 40.0 30.0 41.0 49 36.29949970408908 38.0 35.0 40.0 31.0 41.0 50 35.79193677140537 38.0 35.0 40.0 28.0 41.0 51 35.55488287432732 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 8.0 11 8.0 12 13.0 13 12.0 14 30.0 15 37.0 16 101.0 17 203.0 18 558.0 19 1142.0 20 1628.0 21 2211.0 22 2498.0 23 2871.0 24 3440.0 25 4897.0 26 6460.0 27 8579.0 28 11802.0 29 16216.0 30 22199.0 31 30818.0 32 42209.0 33 56273.0 34 70398.0 35 85940.0 36 89629.0 37 77001.0 38 40216.0 39 3857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.720357295236525 3.4299860990682247 34.640846718141404 13.20880988755385 2 14.770772258694965 35.16952943281446 32.99578843057104 17.06390987791954 3 13.429538791857631 34.83181248881732 36.28212009854522 15.456528620779828 4 15.24801464414991 2.9255611985080585 63.05087603396782 18.77554812337421 5 37.41243101146483 3.6823705905831514 36.36556009744415 22.539638300507868 6 15.800439049231318 28.40056704791004 39.38023865560098 16.418755247257664 7 54.15341949158374 1.4265659193195426 38.34816328777681 6.0718513013199 8 48.196835817608765 23.628143193360586 16.11286593170651 12.062155057324139 9 44.486250464511336 4.253031366557936 16.951566951566953 34.30915121736378 10 37.814835459762996 18.707935918080846 24.79733542535475 18.67989319680141 11 31.054131054131055 19.34053153859917 29.02679714273917 20.578540264530602 12 21.02103032054723 14.732235022090096 33.426235600148644 30.820499057214036 13 21.904634102701735 20.511272141706925 42.98863151520156 14.595462240389775 14 19.189135251937184 29.753843401186398 24.810238517967985 26.246782828908433 15 10.49021429456212 23.502725133159917 45.29329589716063 20.713764675117332 16 11.01545618453831 25.493242220295357 24.583316129209848 38.90798546595648 17 12.806749521725367 28.05820499057214 35.81416793977181 23.32087754793069 18 11.797039514430818 24.648175674745723 33.95130544888999 29.603479361933466 19 12.755997357446633 28.27170816301251 28.81501438264723 30.157280096893622 20 15.28775616939868 25.93039899803185 43.82406375159999 14.957781080969488 21 19.25950011698804 34.775899087493286 27.44160920489423 18.52299159062444 22 13.368464153488308 22.056546513068252 34.48480531813865 30.09018401530479 23 16.147102137440303 33.393719806763286 28.09416160865436 22.36501644714205 24 21.97775162751008 22.23013611902501 23.60560579159613 32.18650646186878 25 11.91557592523776 40.00130751338481 20.609507686802374 27.473608874575056 26 15.123112707653771 25.534876199127403 29.719607195452607 29.622403897766215 27 21.12219056663501 33.31698941602323 20.840559065196747 24.720260952145008 28 15.177993861568742 28.928217515174037 32.81755371127352 23.076234911983704 29 20.720818365745902 30.64329658532557 22.068589399507275 26.56729564942125 30 21.610271549885077 35.81502814594602 24.77187332259796 17.802826981570945 31 28.59359731340408 24.5468433874231 17.552162902404447 29.307396396768375 32 27.50543650302105 39.53146290102812 16.920255446825493 16.04284514912534 33 23.858162324345898 20.444348101352933 21.361499924301857 34.33598964999931 34 27.12591353895702 28.043753526845315 20.565809213152207 24.26452372104546 35 22.79288299819701 28.79505759940543 21.672378435663457 26.73968096673411 36 25.723777474985205 29.384986993682645 25.349071665496787 19.542163865835363 37 17.038619816397592 34.493923503585336 29.87255185322818 18.594904826788884 38 36.077046946612164 22.48389694041868 19.17743644796785 22.26161966500131 39 22.17697537745847 29.668338907469344 25.598187373549692 22.556498341522495 40 32.80447857742544 20.92709580632286 25.32257731533094 20.945848300920762 41 20.216737547655423 23.66736859490483 25.877926421404684 30.237967436035067 42 27.454856379977155 18.4459171174147 32.56396493111469 21.535261571493454 43 25.457113560978296 20.35763931899198 29.06309784329108 25.122149276738647 44 21.63091649806626 20.37415527753692 30.54540512269981 27.449523101697014 45 23.130599942194145 15.078381986594547 26.687036348872095 35.10398172233921 46 30.971551261406333 25.252900615219453 25.705369062856988 18.070179060517226 47 16.22950988893018 17.533582449041386 45.63170100609714 20.605206655931294 48 21.9622679163742 22.465144445820776 25.00103224740906 30.57155539039597 49 21.56915369475756 14.04544641259617 41.22245619830161 23.16294369434466 50 25.71741194929601 13.990737299916045 32.2866344605475 28.00521629024044 51 20.441251359125758 14.621956590555623 26.80918562561075 38.12760642470787 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 125.0 1 257.5 2 390.0 3 1469.0 4 2548.0 5 1807.5 6 1067.0 7 1246.5 8 1426.0 9 1598.5 10 1771.0 11 1975.0 12 2179.0 13 1999.5 14 1820.0 15 1752.0 16 1684.0 17 1591.5 18 1499.0 19 1529.0 20 1559.0 21 1612.0 22 1665.0 23 1878.5 24 2092.0 25 2243.0 26 3079.5 27 3765.0 28 4089.0 29 4413.0 30 4788.0 31 5163.0 32 5470.5 33 5778.0 34 6778.5 35 7779.0 36 8250.5 37 8722.0 38 9789.0 39 10856.0 40 12668.0 41 14480.0 42 16911.0 43 19342.0 44 23308.5 45 27275.0 46 105403.5 47 183532.0 48 137700.5 49 91869.0 50 82145.0 51 72421.0 52 52359.5 53 32298.0 54 26301.5 55 20305.0 56 16993.5 57 13682.0 58 12224.5 59 10767.0 60 9760.5 61 8754.0 62 7851.0 63 6948.0 64 5506.5 65 4065.0 66 3282.5 67 2500.0 68 2077.5 69 1655.0 70 1409.5 71 1164.0 72 907.0 73 650.0 74 554.5 75 347.0 76 235.0 77 168.0 78 101.0 79 64.5 80 28.0 81 22.0 82 16.0 83 13.0 84 10.0 85 7.5 86 5.0 87 2.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 581256.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.79073052986392 #Duplication Level Percentage of deduplicated Percentage of total 1 72.07885757009839 18.589663924908496 2 11.49940968578207 5.9315635291702495 3 4.456727243180308 3.448267541218998 4 2.351545459338217 2.4259230108206813 5 1.4953961707240866 1.9283679837267649 6 1.0636935878785283 1.6460060814791546 7 0.843319150639963 1.5224871875380301 8 0.6889145768443593 1.421408816759048 9 0.6183394536330469 1.4352683602169876 >10 4.677070060572029 19.999405451576173 >50 0.11673743495971382 2.1409346438910735 >100 0.08569742335192865 4.628887957910484 >500 0.010121742915582124 1.7798194279852064 >1k 0.0074226114714268905 4.453116214264736 >5k 0.0033739143051940415 6.3732049743078365 >10k+ 0.0033739143051940415 22.275674894226114 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGC 39673 6.825391909932972 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCG 34332 5.906519674635616 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTC 28109 4.835907070206587 No Hit GCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 13754 2.366255144032922 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGAGCGTT 12130 2.086860178647618 No Hit GAACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCT 8895 1.5303067839299724 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTA 8376 1.4410173830463686 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTC 7225 1.242997921741883 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCT 6775 1.1655793660624578 No Hit CCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 5350 0.9204206064109446 No Hit CTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGCT 4849 0.8342279477545178 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGC 3957 0.6807671662744127 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGT 2872 0.49410242646957625 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATG 2732 0.47001665359153283 No Hit TGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTGCTT 2259 0.3886411495107147 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTAT 1951 0.33565244917901926 No Hit CGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTG 1550 0.2666639140069092 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTT 1509 0.25961022337833933 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAAGAGCGT 1479 0.2544489863330443 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1425 0.24515875965151326 No Hit TTCCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCT 1005 0.17290144101738306 No Hit TCCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTG 924 0.1589661009950865 No Hit GAATCTGTCTCTTATACACATCTGACGCACGAGCGTTCGTATGCCGTCTTC 899 0.15466507012400732 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGC 854 0.1469232145560648 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGC 834 0.14348238985920145 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCAAGAGCGTTCG 767 0.13195562712470923 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCC 732 0.1259341839051984 No Hit TGCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCTG 724 0.12455785402645306 No Hit GCACTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCT 598 0.102880658436214 No Hit TGCCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCGTCTTCT 593 0.10202045226199816 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCAAGAGCGTTCGTATGCCG 593 0.10202045226199816 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9672158222882861 0.0 2 0.0 0.0 0.0 5.242612549375834 0.0 3 0.0 0.0 0.0 6.430213193498218 0.0 4 0.0 0.0 0.0 9.617449110202733 0.0 5 0.0 0.0 0.0 17.121887774061687 0.0 6 0.0 0.0 0.0 18.432325859862093 0.0 7 0.0 0.0 0.0 20.67230273752013 0.0 8 0.0 0.0 0.0 23.373006042088168 0.0 9 0.0 0.0 0.0 23.987537332947962 0.0 10 0.0 0.0 0.0 31.528448738593667 0.0 11 0.0 0.0 0.0 33.78408136862243 0.0 12 0.0 0.0 0.0 43.177016667354835 0.0 13 0.0 0.0 0.0 44.282037518752496 0.0 14 0.0 0.0 0.0 44.85132196484854 0.0 15 0.0 0.0 0.0 46.79590404228085 0.0 16 0.0 0.0 0.0 48.00827862422065 0.0 17 0.0 0.0 0.0 49.12379399094375 0.0 18 0.0 0.0 0.0 50.065031586770715 0.0 19 0.0 0.0 0.0 53.26981570942924 0.0 20 0.0 0.0 0.0 54.252515242853406 0.0 21 0.0 0.0 0.0 55.12786104573544 0.0 22 0.0 0.0 0.0 56.09628115666763 0.0 23 0.0 0.0 0.0 56.91433722834689 0.0 24 0.0 0.0 0.0 57.58030884842479 0.0 25 0.0 0.0 0.0 58.16817374788389 0.0 26 0.0 0.0 0.0 58.716469163329066 0.0 27 0.0 0.0 0.0 59.26029150666832 0.0 28 0.0 0.0 0.0 59.72893183038111 0.0 29 0.0 0.0 0.0 60.26673273050085 0.0 30 0.0 0.0 0.0 60.823458166453335 0.0 31 0.0 0.0 0.0 61.35489354088388 0.0 32 0.0 0.0 0.0 61.83299613251304 0.0 33 0.0 0.0 0.0 62.28047538434012 0.0 34 0.0 0.0 0.0 62.7152235847888 0.0 35 0.0 0.0 0.0 63.18506819714549 0.0 36 0.0 0.0 0.0 63.65680526308546 0.0 37 0.0 0.0 0.0 64.12338109198012 0.0 38 0.0 0.0 0.0 64.59615040532915 0.0 39 0.0 0.0 0.0 65.06444664657225 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCATCC 20 7.0304045E-4 45.000004 11 CGGGTAT 20 7.0304045E-4 45.000004 6 GGATGCG 20 7.0304045E-4 45.000004 9 TAGCGGG 60 0.0 45.000004 3 TTCGTTA 20 7.0304045E-4 45.000004 22 CGATTCG 30 2.1636424E-6 45.000004 10 TACGGGA 30 2.1636424E-6 45.000004 4 TGCGGGT 60 0.0 45.000004 4 GCGTTGA 20 7.0304045E-4 45.000004 37 ATGTCAG 20 7.0304045E-4 45.000004 19 AATGCTC 65 0.0 45.000004 2 ACTAGCA 20 7.0304045E-4 45.000004 27 TGATTCG 30 2.1636424E-6 45.000004 26 TGCGACC 35 1.2105374E-7 45.000004 32 CCCCCGG 20 7.0304045E-4 45.000004 2 CATGTCA 20 7.0304045E-4 45.000004 18 CTCGAAC 30 2.1636424E-6 45.000004 13 TAAGGCG 30 2.1636424E-6 45.000004 29 GATTCAC 20 7.0304045E-4 45.000004 9 AACACTC 20 7.0304045E-4 45.000004 30 >>END_MODULE