##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933843.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 890640 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.635862974939368 28.0 16.0 31.0 16.0 33.0 2 25.381119195185484 28.0 16.0 31.0 16.0 34.0 3 26.461187460702416 30.0 16.0 33.0 16.0 34.0 4 30.975051648252943 33.0 28.0 35.0 19.0 37.0 5 33.22879502380311 35.0 32.0 35.0 28.0 37.0 6 31.3465238480194 35.0 28.0 36.0 17.0 37.0 7 33.1542632264439 35.0 32.0 35.0 28.0 37.0 8 31.896827000808408 35.0 30.0 37.0 17.0 37.0 9 34.16877189436809 35.0 32.0 38.0 28.0 39.0 10 33.624128716428636 35.0 32.0 37.0 27.0 39.0 11 34.45150229048774 35.0 32.0 39.0 27.0 39.0 12 34.648708793676455 37.0 34.0 39.0 27.0 39.0 13 34.79420753615378 35.0 34.0 38.0 30.0 39.0 14 34.64057194826192 37.0 33.0 39.0 27.0 40.0 15 35.05673560585646 37.0 33.0 39.0 27.0 40.0 16 34.737331581783884 36.0 32.0 39.0 27.0 40.0 17 34.11550570376359 36.0 32.0 38.0 27.0 40.0 18 34.48229363154586 36.0 32.0 39.0 27.0 40.0 19 34.24725366028923 36.0 32.0 39.0 27.0 40.0 20 33.92060428455942 36.0 32.0 39.0 25.0 40.0 21 33.90151800952124 36.0 32.0 39.0 25.0 40.0 22 35.26129300278451 37.0 34.0 39.0 29.0 40.0 23 35.4628929758376 37.0 34.0 39.0 29.0 40.0 24 35.748761564717505 38.0 34.0 39.0 30.0 40.0 25 33.492487424773195 36.0 31.0 39.0 24.0 40.0 26 34.77005411838678 37.0 33.0 39.0 27.0 40.0 27 34.81397646636127 37.0 33.0 39.0 27.0 40.0 28 34.94445454953741 37.0 33.0 39.0 27.0 40.0 29 35.060428455941796 37.0 33.0 40.0 25.0 40.0 30 32.76868768526004 36.0 30.0 39.0 20.0 40.0 31 33.93794462409054 36.0 31.0 39.0 25.0 40.0 32 34.36270097907123 37.0 32.0 39.0 25.0 40.0 33 34.950446869666756 37.0 33.0 39.0 27.0 40.0 34 35.06266841821611 37.0 34.0 39.0 27.0 40.0 35 35.03158627503817 38.0 34.0 40.0 25.0 40.0 36 35.30163927063685 38.0 34.0 40.0 27.0 41.0 37 34.73417205604958 38.0 33.0 40.0 24.0 41.0 38 34.946864052815954 37.0 33.0 40.0 27.0 40.0 39 34.376715620228154 37.0 33.0 39.0 24.0 40.0 40 34.22717371777598 37.0 33.0 39.0 24.0 40.0 41 33.976897511901555 36.0 33.0 39.0 24.0 40.0 42 34.78610661995868 37.0 33.0 39.0 27.0 40.0 43 35.215311461421 38.0 34.0 40.0 28.0 40.0 44 35.791519581424595 38.0 35.0 40.0 30.0 41.0 45 36.16784447139136 38.0 35.0 40.0 31.0 41.0 46 35.637772837510106 38.0 35.0 40.0 28.0 41.0 47 35.06944444444444 38.0 34.0 40.0 26.0 41.0 48 35.36066760980868 38.0 34.0 40.0 28.0 41.0 49 35.733159301176684 38.0 35.0 40.0 29.0 41.0 50 35.40263406090003 38.0 34.0 40.0 28.0 41.0 51 35.01332524925896 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 5.0 11 9.0 12 10.0 13 13.0 14 25.0 15 70.0 16 166.0 17 551.0 18 1444.0 19 2951.0 20 4240.0 21 4999.0 22 5216.0 23 5548.0 24 6717.0 25 8894.0 26 12186.0 27 15545.0 28 20248.0 29 27440.0 30 36688.0 31 49969.0 32 66534.0 33 86559.0 34 106735.0 35 125063.0 36 127189.0 37 111944.0 38 58495.0 39 5181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.055173807599026 2.868274499236504 38.26203628851163 9.814515404652834 2 13.495576214856733 35.97907122967754 34.63711488367915 15.888237671786582 3 11.867758016707088 35.90979520344921 38.3534312404563 13.869015539387409 4 13.499393694421988 2.639225725321117 67.20886104374382 16.65251953651307 5 38.52780023353993 3.0822779125123505 37.91610527261295 20.47381658133477 6 14.421764124674391 29.51315907661906 40.56846761879098 15.496609179915566 7 56.332749483517475 0.7801131770412288 37.96112907572083 4.926008263720471 8 51.92165184586365 24.94150273960298 13.626156471750651 9.510688942782718 9 49.545495374112996 2.942939908380491 13.287635857361 34.22392886014551 10 38.492320129345195 24.7475972334501 20.088363424054613 16.671719213150094 11 30.72240186831941 19.82709063145603 29.782403664780382 19.668103835444175 12 20.81065301356328 15.556678343662982 31.91581334770502 31.71685529506871 13 22.90251953651307 20.207603521063504 43.01446151082368 13.87541543159975 14 20.199407167879276 30.553983652205158 23.299761968921224 25.94684721099434 15 10.427782268930208 22.817636755591487 44.20899577831672 22.545585197161593 16 11.604015090272163 26.148949070331444 22.999079313751906 39.247956525644476 17 14.076731339261656 28.980957513698012 35.15539387406809 21.786917272972246 18 12.12555016617264 24.641606036108865 32.900273960298215 30.33256983742028 19 12.54435013024342 28.960859606575045 28.10900026946915 30.385789993712386 20 15.248809844606125 26.968584388754152 43.010082637204704 14.772523129435013 21 18.613693523758197 36.69204167789455 27.303512081200036 17.39075271714722 22 13.791879996407078 21.813190514686067 35.09352824934878 29.30140123955807 23 16.25909458367017 34.509229318243065 27.93968382286895 21.291992275217822 24 20.944377077158 23.89046079223929 23.955245666037904 31.209916464564806 25 12.52964160603611 42.249618252043476 19.926345100152698 25.29439504176772 26 17.98448306835534 22.434092338093954 30.04783077337645 29.533593820174257 27 21.30108685888799 31.765135183688137 21.759072127908023 25.174705829515855 28 15.894974400431149 26.30670079942513 34.89995957962813 22.898365220515586 29 26.28997125662445 18.266190604509116 27.518076888529595 27.92576125033684 30 16.663410581155127 36.127391538668824 30.137878379592202 17.07131950058385 31 28.153799514955537 21.165117219078418 20.938650857810114 29.742432408155935 32 23.23621216204078 34.465216024431875 25.12069972154855 17.177872091978802 33 15.920349411659032 20.336611874607023 24.99281415611246 38.750224557621486 34 29.991466810383542 21.546640617982575 22.407257702326415 26.054634869307463 35 15.304724692356059 32.21862930027845 22.73679601185664 29.73984999550885 36 31.157594538758644 22.009678433486034 20.045697475972336 26.787029551782986 37 14.558744273780652 29.22527620587443 36.06608730800323 20.149892212341687 38 25.20434743555196 22.568939189796104 27.51818916734034 24.708524207311598 39 19.727723883948624 21.055533099793408 33.87047516392707 25.346267852330907 40 15.944377077157998 27.001369801491066 35.259251774005214 21.79500134734573 41 18.15233989041588 24.17385251055421 19.370115871732686 38.30369172729722 42 16.676098086769066 26.74750741040151 32.66370250606306 23.91269199676637 43 24.27804724692356 19.050682655169314 21.99766460073655 34.67360549717057 44 20.361313212970447 20.71443007275667 31.138507140932365 27.785749573340517 45 20.366478038264617 17.41365759453876 26.97397377166981 35.24589059552682 46 30.058946375639987 24.88727207401419 25.256220246115152 19.797561304230666 47 12.351118296954999 18.96411569208659 47.40130692535705 21.28345908560137 48 20.774499236504088 24.696285816940627 24.105137878379594 30.42407706817569 49 17.692894996856193 18.467618790981767 40.06096739423336 23.77851881792868 50 24.12590945836702 15.693658492769243 29.390438336477143 30.789993712386597 51 19.795989400880266 15.664466001976107 26.23652654271086 38.30301805443277 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 67.0 1 144.0 2 221.0 3 1859.5 4 3498.0 5 2399.0 6 1300.0 7 1472.5 8 1645.0 9 1924.5 10 2204.0 11 2539.5 12 2875.0 13 3045.0 14 3215.0 15 3116.0 16 3017.0 17 2827.0 18 2637.0 19 2540.0 20 2443.0 21 2441.0 22 2439.0 23 2506.5 24 2574.0 25 2625.0 26 3469.5 27 4263.0 28 4749.0 29 5235.0 30 5871.0 31 6507.0 32 8334.0 33 10161.0 34 12804.0 35 15447.0 36 16839.0 37 18231.0 38 20325.5 39 22420.0 40 25306.0 41 28192.0 42 32727.5 43 37263.0 44 44623.0 45 51983.0 46 169852.5 47 287722.0 48 213420.5 49 139119.0 50 120816.5 51 102514.0 52 75237.0 53 47960.0 54 39098.0 55 30236.0 56 25112.5 57 19989.0 58 16581.5 59 13174.0 60 10706.5 61 8239.0 62 6595.5 63 4952.0 64 3845.5 65 2739.0 66 2135.5 67 1532.0 68 1224.5 69 917.0 70 689.0 71 461.0 72 389.5 73 318.0 74 208.0 75 104.0 76 110.0 77 69.0 78 28.0 79 21.5 80 15.0 81 8.0 82 1.0 83 1.5 84 2.0 85 1.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 890640.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.2948213862181 #Duplication Level Percentage of deduplicated Percentage of total 1 74.56829150833344 21.098964893037387 2 11.616004030349625 6.573455185206643 3 4.284500212557974 3.6368750473062406 4 2.155077772566332 2.439101625926925 5 1.2063653209428145 1.7066945641302307 6 0.8258811981441119 1.4020896592634065 7 0.6379657192286688 1.2635788253273745 8 0.5065445342257239 1.1466069696065517 9 0.4074734123402434 1.0376448679619987 >10 3.578914202905109 18.51138985118334 >50 0.11836811724152936 2.3127739631572313 >100 0.07448333900179527 4.228769688532556 >500 0.008857478151564843 1.5676328677540072 >1k 0.007247027578553054 4.762819749140854 >5k 8.052252865058948E-4 1.6907787968319872 >10k+ 0.003220901146023579 26.62082344563329 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 64096 7.196622653372856 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCG 54428 6.111111111111111 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 41971 4.712453965687596 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAGTTCACT 19843 2.2279484415701067 No Hit GCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 18728 2.1027575675918437 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTA 12831 1.4406494206413367 No Hit GAACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCT 11598 1.302209646995419 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTC 10188 1.1438965238480194 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCT 9326 1.0471121889876942 No Hit CTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCT 5516 0.6193299200574868 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 4667 0.5240052097368185 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGT 4593 0.5156965777418486 No Hit TCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 4459 0.5006512171023085 TruSeq Adapter, Index 19 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATG 4019 0.45124854037546036 No Hit GAATGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTT 2958 0.3321207221773107 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTAT 2948 0.3309979340698823 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2623 0.29450732057846046 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGAGTTCAC 2347 0.2635183688134375 No Hit TGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCTT 1932 0.21692266235516033 TruSeq Adapter, Index 19 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 1885 0.211645558250247 No Hit GAATCTGTCTCTTATACACATCTGACGCGCGTTCACTCGTATGCCGTCTTC 1627 0.18267762507859517 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGAGTTCACTCG 1205 0.13529596694511814 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 1165 0.13080481451540465 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 1110 0.12462947992454865 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCC 1092 0.12260846133117759 No Hit TTCCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCT 1091 0.12249618252043475 No Hit TCCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 1047 0.11755591484774992 No Hit TGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 1041 0.11688224198329292 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.122788107428366E-4 0.0 0.0 0.6866972065031888 0.0 2 1.122788107428366E-4 0.0 0.0 4.098401149735022 0.0 3 1.122788107428366E-4 0.0 0.0 4.955425312135094 0.0 4 1.122788107428366E-4 0.0 0.0 7.44498338273601 0.0 5 1.122788107428366E-4 0.0 0.0 14.279843707895447 0.0 6 1.122788107428366E-4 0.0 0.0 15.41161412018324 0.0 7 1.122788107428366E-4 0.0 0.0 17.359314650139225 0.0 8 1.122788107428366E-4 0.0 0.0 19.783751010509295 0.0 9 1.122788107428366E-4 0.0 0.0 20.332233000988055 0.0 10 1.122788107428366E-4 0.0 0.0 28.018391269199675 0.0 11 1.122788107428366E-4 0.0 0.0 30.17257253211174 0.0 12 1.122788107428366E-4 0.0 0.0 40.000898230485944 0.0 13 2.245576214856732E-4 0.0 0.0 41.04632623731249 0.0 14 3.3683643222850985E-4 0.0 0.0 41.574485763046795 0.0 15 3.3683643222850985E-4 0.0 0.0 43.474355519626336 0.0 16 3.3683643222850985E-4 0.0 0.0 44.5853543519267 0.0 17 3.3683643222850985E-4 0.0 0.0 45.61820713195006 0.0 18 4.491152429713464E-4 0.0 0.0 46.518907751729095 0.0 19 4.491152429713464E-4 0.0 0.0 49.783975568130785 0.0 20 4.491152429713464E-4 0.0 0.0 50.78325698374203 0.0 21 4.491152429713464E-4 0.0 0.0 51.75278451450642 0.0 22 4.491152429713464E-4 0.0 0.0 52.95978172999192 0.0 23 4.491152429713464E-4 0.0 0.0 53.98926614569299 0.0 24 4.491152429713464E-4 0.0 0.0 54.80463486930746 0.0 25 4.491152429713464E-4 0.0 0.0 55.48897422078505 0.0 26 4.491152429713464E-4 0.0 0.0 56.16073834545944 0.0 27 4.491152429713464E-4 0.0 0.0 56.83923919877841 0.0 28 4.491152429713464E-4 0.0 0.0 57.43364322285098 0.0 29 4.491152429713464E-4 0.0 0.0 58.06914129165544 0.0 30 4.491152429713464E-4 0.0 0.0 58.79940267672685 0.0 31 4.491152429713464E-4 0.0 0.0 59.39942064133657 0.0 32 4.491152429713464E-4 0.0 0.0 59.92308901464116 0.0 33 4.491152429713464E-4 0.0 0.0 60.48055330997934 0.0 34 4.491152429713464E-4 0.0 0.0 61.058115512440494 0.0 35 4.491152429713464E-4 0.0 0.0 61.66745261834187 0.0 36 4.491152429713464E-4 0.0 0.0 62.238165813347706 0.0 37 4.491152429713464E-4 0.0 0.0 62.75891493757298 0.0 38 4.491152429713464E-4 0.0 0.0 63.33075092068625 0.0 39 4.491152429713464E-4 0.0 0.0 63.932789903889336 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGAT 20 7.032429E-4 45.000004 16 CGAAATT 20 7.032429E-4 45.000004 20 ACCATCG 20 7.032429E-4 45.000004 14 GTTAGCG 40 6.8121153E-9 45.000004 1 TCGGATC 20 7.032429E-4 45.000004 24 AGTGCGA 20 7.032429E-4 45.000004 16 CTAACGG 20 7.032429E-4 45.000004 2 TACGCCA 20 7.032429E-4 45.000004 40 CGCTCGA 20 7.032429E-4 45.000004 41 CGAGGGA 40 6.8121153E-9 45.000004 4 ACGGACG 20 7.032429E-4 45.000004 43 ACTACCG 20 7.032429E-4 45.000004 14 CTACCGA 20 7.032429E-4 45.000004 15 GTGACGG 20 7.032429E-4 45.000004 2 GTGCGAA 20 7.032429E-4 45.000004 17 TTCTCCG 160 0.0 45.000004 1 TCTTCGC 25 3.890096E-5 45.0 1 ATTCGGC 45 3.8380676E-10 45.0 28 CGCGAAC 25 3.890096E-5 45.0 32 GCCGATT 95 0.0 45.0 9 >>END_MODULE