##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933839.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 742570 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.69143784424364 28.0 16.0 31.0 16.0 34.0 2 26.127239182837982 30.0 16.0 31.0 16.0 34.0 3 27.419600845711514 31.0 25.0 33.0 16.0 34.0 4 31.729183780653674 35.0 28.0 35.0 25.0 37.0 5 33.2428646457573 35.0 32.0 35.0 28.0 37.0 6 31.34665284080962 35.0 28.0 37.0 17.0 37.0 7 33.23742812125456 35.0 32.0 35.0 28.0 37.0 8 32.422956758285416 35.0 32.0 37.0 23.0 37.0 9 34.516992337422735 35.0 32.0 39.0 29.0 39.0 10 33.55721750138034 35.0 32.0 37.0 27.0 39.0 11 34.368015136620116 35.0 32.0 39.0 27.0 39.0 12 34.183361837941206 35.0 32.0 39.0 27.0 39.0 13 34.751891404177385 37.0 34.0 39.0 30.0 39.0 14 34.82429939264985 37.0 33.0 39.0 27.0 40.0 15 35.30019661446059 37.0 33.0 39.0 27.0 40.0 16 34.8275516112959 36.0 32.0 39.0 27.0 40.0 17 34.51037343280768 36.0 32.0 38.0 27.0 40.0 18 34.832545079925126 37.0 33.0 39.0 27.0 40.0 19 34.3561684420324 36.0 32.0 39.0 27.0 40.0 20 34.64408877277563 37.0 32.0 39.0 27.0 40.0 21 34.127237836163594 36.0 32.0 39.0 25.0 40.0 22 35.47319983301237 37.0 34.0 39.0 30.0 40.0 23 35.97599418236665 38.0 34.0 39.0 30.0 40.0 24 36.22357622850371 38.0 35.0 40.0 30.0 40.0 25 34.19447863501084 37.0 32.0 39.0 25.0 40.0 26 34.986638296726234 37.0 33.0 39.0 27.0 40.0 27 35.41757006073502 37.0 34.0 39.0 30.0 40.0 28 35.69128836338662 38.0 34.0 39.0 30.0 40.0 29 36.20943884078269 38.0 35.0 40.0 30.0 40.0 30 33.74192332036037 37.0 32.0 39.0 24.0 40.0 31 34.96877196762595 37.0 33.0 39.0 27.0 40.0 32 35.273504181423974 37.0 34.0 39.0 29.0 40.0 33 35.80672125186851 38.0 35.0 39.0 30.0 40.0 34 35.991553658240974 38.0 35.0 40.0 30.0 40.0 35 36.25311822454449 38.0 35.0 40.0 30.0 41.0 36 36.067422599889575 38.0 35.0 40.0 30.0 41.0 37 36.41905140256137 38.0 35.0 40.0 30.0 41.0 38 35.84236772290828 38.0 35.0 40.0 30.0 41.0 39 35.884798739512775 38.0 35.0 40.0 30.0 41.0 40 35.32934672825458 38.0 34.0 40.0 28.0 41.0 41 35.01768183470919 37.0 33.0 40.0 27.0 40.0 42 35.852768089203714 38.0 35.0 40.0 30.0 41.0 43 36.05627886933218 38.0 35.0 40.0 31.0 40.0 44 36.52161277724659 38.0 35.0 40.0 31.0 41.0 45 36.75930350000673 39.0 35.0 40.0 32.0 41.0 46 36.54886273347967 39.0 35.0 40.0 31.0 41.0 47 36.221997926121446 38.0 35.0 40.0 30.0 41.0 48 36.382506699705075 38.0 35.0 40.0 31.0 41.0 49 36.59788302786269 39.0 35.0 40.0 31.0 41.0 50 36.35301587729103 39.0 35.0 40.0 31.0 41.0 51 35.770220989267 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 11.0 11 12.0 12 13.0 13 13.0 14 28.0 15 45.0 16 106.0 17 250.0 18 601.0 19 1097.0 20 1607.0 21 2231.0 22 2604.0 23 3150.0 24 3938.0 25 5268.0 26 7137.0 27 9428.0 28 13109.0 29 17751.0 30 25082.0 31 36163.0 32 50114.0 33 67117.0 34 85143.0 35 107828.0 36 124393.0 37 113840.0 38 58759.0 39 5727.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.524583540945635 3.151218066983584 35.22711663546871 13.097081756602073 2 14.544352720955601 28.318677027081623 33.6047780007272 23.53219225123557 3 14.276229850384475 28.33631846155918 42.302543867918175 15.084907820138168 4 15.239640707273388 3.0782283151756737 57.23433481018625 24.447796167364693 5 32.41135515843624 9.481261025896547 36.40518738974103 21.702196425926175 6 15.028751498175255 28.739916775522843 39.27723985617518 16.95409187012672 7 53.54969901827437 1.4610070431070472 32.88444187080006 12.104852067818522 8 48.76321424242832 19.00669297170637 20.739189571353542 11.490903214511764 9 46.06596011150464 3.795736428888859 21.564162301197193 28.57414115840931 10 40.77352976823734 18.23491388017291 24.116918270331418 16.874638081258333 11 28.79607309748576 24.676865480695422 27.55807533296524 18.968986088853576 12 20.933110683167914 14.77382603660261 32.1227628371736 32.17030044305587 13 21.246885815478674 19.56650551463162 38.9140417738395 20.272566896050204 14 17.81313546197665 27.03394966131139 25.339429279394537 29.813485597317424 15 11.028185894932465 21.926552378900304 45.4886408015406 21.556620924626635 16 16.008861117470406 24.16378253901989 25.51799830319027 34.30935804031943 17 13.879364908358808 27.010921529283433 32.784787966117676 26.324925596240085 18 12.27641838479874 26.954226537565486 34.51337921004081 26.255975867594973 19 12.736711690480359 26.492855892373786 31.330379627509863 29.440052789635995 20 15.322865184427057 25.451607255881605 44.30855003568687 14.916977524004471 21 19.17516193759511 35.29943305008282 27.558614002720283 17.96679100960179 22 17.509595055011648 22.52057045127059 32.45566074578828 27.514173747929487 23 15.938699381876456 33.621880765449724 28.78583837214 21.65358148053382 24 21.04879001306274 25.684581924936367 24.53075130964084 28.735876752360046 25 13.396312805526753 36.78979759483955 22.18726854033963 27.62662105929407 26 15.282464952799064 20.40117430006599 36.65405281656948 27.662307930565465 27 24.08486741990654 24.312994061165952 27.211306678158287 24.39083184076922 28 15.266574195025385 23.819976567865655 37.819599499037125 23.09384973807183 29 24.493044426788046 19.911792827612214 30.716026771886824 24.879135973712916 30 22.19952327726679 31.73909530414641 28.5004780694076 17.560903349179203 31 27.886663883539597 19.534319996767984 27.63739445439487 24.941621665297546 32 28.152497407651804 33.755470864699625 20.719258790417065 17.372772937231506 33 19.324777462057448 23.769610945769422 21.48282316818616 35.42278842398696 34 27.59699422276688 21.023068532259582 32.48986627523331 18.89007096974023 35 25.428309788976122 25.200317815155476 23.294100219507925 26.077272176360477 36 19.19253403719515 21.57870638458327 34.103855528771696 25.12490404944988 37 28.54828501016739 21.57022233594139 32.13528690897828 17.74620574491294 38 19.956367749841768 30.488304132943693 25.900049826952344 23.655278290262196 39 31.193557509729725 22.51222107006747 27.57585143488156 18.71836998532125 40 21.651965471268703 29.93239694574249 28.69008982318165 19.725547759807156 41 24.141293076746972 25.474096718154517 22.392771051887365 27.991839153211146 42 20.453829268621142 22.083574612494445 31.491172549389283 25.971423569495133 43 22.553294638889263 20.67145184965727 25.141602811856124 31.633650699597343 44 24.736388488627334 17.780949944113015 31.37010652194406 26.112555045315595 45 19.564754837927737 18.006787238913503 30.272297561172685 32.156160361986075 46 29.884590004982698 21.97247397551746 26.622944638215927 21.51999138128392 47 14.898124082578073 19.18593533269591 44.38140512005602 21.53453546467 48 22.482594233540272 22.340654753087254 26.533794793756815 28.642956219615662 49 19.502403813781864 18.548150342728633 38.77062095156012 23.17882489192938 50 24.00406695665055 15.846721521203389 31.378321235708416 28.770890286437645 51 19.870315256474136 16.21961565912978 27.723312280323743 36.186756804072346 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 116.0 1 292.5 2 469.0 3 2001.0 4 3533.0 5 2357.5 6 1182.0 7 1392.5 8 1603.0 9 1884.5 10 2166.0 11 2198.5 12 2231.0 13 2133.5 14 2036.0 15 1883.0 16 1730.0 17 1660.5 18 1591.0 19 1660.5 20 1730.0 21 1933.5 22 2137.0 23 2183.0 24 2229.0 25 2747.5 26 3532.5 27 3799.0 28 4747.5 29 5696.0 30 10672.5 31 15649.0 32 12824.0 33 9999.0 34 10929.5 35 11860.0 36 12799.5 37 13739.0 38 17707.0 39 21675.0 40 22608.5 41 23542.0 42 24380.5 43 25219.0 44 31850.0 45 38481.0 46 118657.5 47 198834.0 48 157064.5 49 115295.0 50 104635.5 51 93976.0 52 69120.5 53 44265.0 54 35455.5 55 26646.0 56 22557.0 57 18468.0 58 16676.5 59 14885.0 60 13457.5 61 12030.0 62 10158.5 63 8287.0 64 7290.5 65 6294.0 66 5022.5 67 3751.0 68 2862.0 69 1973.0 70 1478.5 71 984.0 72 805.0 73 626.0 74 478.0 75 244.5 76 159.0 77 101.5 78 44.0 79 37.5 80 31.0 81 16.5 82 2.0 83 5.0 84 8.0 85 6.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 742570.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.071043488238033 #Duplication Level Percentage of deduplicated Percentage of total 1 71.78345276200125 19.43252971456016 2 11.761315340804416 6.367821581395948 3 4.597544674550051 3.7338099547158476 4 2.440938816937733 2.6431504346179864 5 1.5839324088946731 2.143935156180866 6 1.1416966331782155 1.8544151524285446 7 0.9483942003963438 1.7971814450045511 8 0.7991724173034107 1.7307545010736751 9 0.6893075412871282 1.6794246984258854 >10 4.029109408383018 17.0246660164717 >50 0.11130874938326017 2.1199057754287742 >100 0.08662943390903936 4.96380818498786 >500 0.010576849488894341 2.0995902389888492 >1k 0.010073189989423182 6.155743886607479 >5k 0.004029275995769273 8.263651224406532 >10k+ 0.0025182974973557955 17.989612034705356 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGC 38503 5.185100394575596 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCG 34824 4.689658887377621 No Hit GAATCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTC 29117 3.921111814374403 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGTGAGACT 14932 2.010854195564055 No Hit GCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 14565 1.961431245539141 TruSeq Adapter, Index 15 (95% over 22bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 8647 1.1644693429575663 No Hit GAACTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCT 8264 1.112891713912493 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCT 8123 1.0939036050473356 No Hit CCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 8070 1.0867662307930566 TruSeq Adapter, Index 15 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGTGAGACTCGTA 7723 1.0400366295433427 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTC 7490 1.008659116312267 No Hit CTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGCT 7097 0.9557348128795937 TruSeq Adapter, Index 14 (95% over 22bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 5194 0.6994626769193477 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATG 4226 0.5691045961996849 No Hit TCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGC 3794 0.5109282626553725 TruSeq Adapter, Index 15 (95% over 22bp) GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTA 3604 0.48534144929097595 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCTGT 3172 0.42716511574666366 No Hit TGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTGCTT 2968 0.39969295823962725 TruSeq Adapter, Index 15 (95% over 24bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGT 2631 0.3543100313775132 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATG 2351 0.3166031485247182 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2321 0.31256312536191877 No Hit CGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTG 2286 0.30784976500531935 No Hit GCTCCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTC 2071 0.27889626567192316 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTC 2012 0.2709508867850842 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTAT 1964 0.2644868497246051 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTGTGAGAC 1905 0.25654147083776613 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTT 1674 0.22543329248421026 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACCTGTCTCTTATACACATC 1635 0.22018126237257096 No Hit GCTGTCTCTTATACACATCTGACGCTGTGCGACTCGTATGCCGTCTTCTGC 1608 0.21654524152605142 TruSeq Adapter, Index 14 (95% over 22bp) GCTCAACTTGACCCTGCATTAGAAATTGAAGCTGTCTCTTATACACATCTG 1363 0.1835517190298558 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCC 1296 0.17452900063293697 No Hit TCCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTG 1175 0.1582342405429791 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGC 1092 0.1470568431259006 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCG 989 0.1331860969336224 No Hit TTCCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCT 941 0.12672205987314328 No Hit GCTCAACTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGT 922 0.12416337853670362 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTC 906 0.1220086995165439 No Hit TGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCTG 904 0.12173936463902393 No Hit CCTGTCTCTTATACACATCTGACGCTGTGCGACTCGTATGCCGTCTTCTGC 879 0.11837267867002438 TruSeq Adapter, Index 14 (95% over 22bp) GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCTGTGAGACTCG 822 0.11069663466070538 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGC 810 0.1090806253955856 No Hit GCTCAACTTGACCCTGCATCTGTCTCTTATACACATCTGACGCTGTGAGAC 788 0.106117941742866 No Hit GCTCAACTTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCG 766 0.10315525809014639 No Hit CGTCTGTCTCTTATACACATCTGACGCTGTGAGACTCGTATGCCGTCTTCT 747 0.10059657675370673 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.0482513433077016 0.0 2 0.0 0.0 0.0 5.275192911106024 0.0 3 0.0 0.0 0.0 6.4177114615457125 0.0 4 0.0 0.0 0.0 8.964946065690777 0.0 5 0.0 0.0 0.0 15.231156658631509 0.0 6 0.0 0.0 0.0 16.43400622163567 0.0 7 0.0 0.0 0.0 18.599458636896184 0.0 8 0.0 0.0 0.0 21.317047551072626 0.0 9 0.0 0.0 0.0 22.077783912627766 0.0 10 0.0 0.0 0.0 28.366079965525135 0.0 11 0.0 0.0 0.0 30.583514012147003 0.0 12 0.0 0.0 0.0 37.91656005494431 0.0 13 0.0 0.0 0.0 39.571488209865734 0.0 14 0.0 0.0 0.0 40.06948839840015 0.0 15 0.0 0.0 0.0 42.18390185437063 0.0 16 0.0 0.0 0.0 43.21060640747674 0.0 17 0.0 0.0 0.0 44.24970036494876 0.0 18 1.3466743875998222E-4 0.0 0.0 45.19048709212599 0.0 19 1.3466743875998222E-4 0.0 0.0 48.20851906217596 0.0 20 1.3466743875998222E-4 0.0 0.0 49.363965686736606 0.0 21 2.6933487751996444E-4 0.0 0.0 50.322259180952635 0.0 22 2.6933487751996444E-4 0.0 0.0 51.3915186447069 0.0 23 2.6933487751996444E-4 0.0 0.0 52.390347037989685 0.0 24 2.6933487751996444E-4 0.0 0.0 53.13020994653703 0.0 25 2.6933487751996444E-4 0.0 0.0 54.31218605653339 0.0 26 2.6933487751996444E-4 0.0 0.0 54.95185639064331 0.0 27 2.6933487751996444E-4 0.0 0.0 55.652800409389016 0.0 28 2.6933487751996444E-4 0.0 0.0 56.20614891525378 0.0 29 2.6933487751996444E-4 0.0 0.0 56.82077110575434 0.0 30 2.6933487751996444E-4 0.0 0.0 57.50811371318529 0.0 31 2.6933487751996444E-4 0.0 0.0 58.09809176239277 0.0 32 2.6933487751996444E-4 0.0 0.0 58.86825484466111 0.0 33 2.6933487751996444E-4 0.0 0.0 59.39372719070256 0.0 34 2.6933487751996444E-4 0.0 0.0 60.190285090967855 0.0 35 2.6933487751996444E-4 0.0 0.0 60.77487644262494 0.0 36 2.6933487751996444E-4 0.0 0.0 61.30573548621679 0.0 37 2.6933487751996444E-4 0.0 0.0 61.90433225150491 0.0 38 2.6933487751996444E-4 0.0 0.0 62.43963532057584 0.0 39 2.6933487751996444E-4 0.0 0.0 63.16266479927818 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCG 35 1.2111559E-7 45.000004 1 ACCGGTC 35 1.2111559E-7 45.000004 17 ATAGGTA 20 7.0316705E-4 45.000004 33 TCTTACG 35 1.2111559E-7 45.000004 1 TTCCGCG 20 7.0316705E-4 45.000004 1 ATCGACG 20 7.0316705E-4 45.000004 16 TAGCGGG 65 0.0 44.999996 3 CTCAACT 3495 0.0 44.4206 2 GCTCAAC 3685 0.0 44.267296 1 TTGACCC 3170 0.0 44.148266 8 CTTGACC 3630 0.0 44.070248 7 TACGGCT 4140 0.0 44.02174 7 ACCCTGC 2735 0.0 44.0128 11 CTGCATT 2665 0.0 43.986866 14 TGCATTA 2650 0.0 43.896225 15 ACTTGAC 3345 0.0 43.856506 6 TCAACTT 3420 0.0 43.81579 3 CACCGGT 180 0.0 43.75 16 GCATTAG 2655 0.0 43.728813 16 CCTGCAT 2760 0.0 43.695652 13 >>END_MODULE