##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933838.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 483427 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.31194368539614 28.0 16.0 31.0 16.0 34.0 2 26.308844975559907 30.0 16.0 33.0 16.0 34.0 3 27.3964424825258 31.0 25.0 33.0 16.0 34.0 4 31.43944380433861 35.0 28.0 35.0 19.0 37.0 5 33.33532467156365 35.0 32.0 35.0 28.0 37.0 6 31.839725542843077 35.0 30.0 37.0 17.0 37.0 7 33.13530481334307 35.0 32.0 35.0 28.0 37.0 8 32.27697873722403 35.0 32.0 37.0 17.0 37.0 9 34.230363632978715 35.0 32.0 39.0 28.0 39.0 10 33.48558727584516 35.0 32.0 37.0 27.0 39.0 11 34.02736711023588 35.0 32.0 39.0 27.0 39.0 12 34.238484817769795 35.0 32.0 39.0 27.0 39.0 13 34.50163106322154 35.0 33.0 38.0 27.0 39.0 14 34.40806574725863 37.0 32.0 39.0 26.0 40.0 15 34.9314022592863 37.0 32.0 39.0 27.0 40.0 16 34.68079151557526 36.0 32.0 39.0 27.0 40.0 17 34.112076900959195 36.0 32.0 38.0 27.0 40.0 18 34.36329580267548 36.0 32.0 39.0 27.0 40.0 19 34.13013753886316 36.0 32.0 39.0 27.0 40.0 20 34.17242106874461 36.0 32.0 39.0 25.0 40.0 21 33.97367337777989 36.0 32.0 39.0 25.0 40.0 22 35.10038123646383 37.0 33.0 39.0 27.0 40.0 23 35.529614605721235 37.0 34.0 39.0 29.0 40.0 24 35.79851352944705 38.0 34.0 39.0 30.0 40.0 25 33.7967635237585 36.0 32.0 39.0 24.0 40.0 26 34.693213246260555 37.0 33.0 39.0 27.0 40.0 27 34.97329276188545 37.0 33.0 39.0 27.0 40.0 28 35.09124024930341 37.0 33.0 39.0 27.0 40.0 29 35.536726330966204 38.0 34.0 40.0 28.0 40.0 30 33.820036944564535 37.0 32.0 39.0 24.0 40.0 31 34.33585836124172 36.0 32.0 39.0 25.0 40.0 32 34.7548233756079 37.0 33.0 39.0 27.0 40.0 33 35.29797053122809 38.0 34.0 39.0 28.0 40.0 34 35.58959677469401 38.0 35.0 40.0 30.0 40.0 35 35.717436138238035 38.0 35.0 40.0 30.0 41.0 36 35.54756974682837 38.0 34.0 40.0 28.0 41.0 37 36.01588450789881 38.0 35.0 40.0 30.0 41.0 38 35.38618860758708 38.0 34.0 40.0 29.0 41.0 39 35.2744674997466 38.0 34.0 40.0 28.0 41.0 40 34.82189658417921 37.0 33.0 40.0 26.0 41.0 41 34.412215287933854 37.0 33.0 39.0 26.0 40.0 42 35.31964908869384 37.0 34.0 40.0 29.0 41.0 43 35.321959675400834 38.0 34.0 40.0 28.0 40.0 44 35.958775575216116 38.0 35.0 40.0 30.0 41.0 45 36.112573356473675 38.0 35.0 40.0 31.0 41.0 46 35.81377539938812 38.0 35.0 40.0 30.0 41.0 47 35.34250465944186 38.0 34.0 40.0 28.0 41.0 48 35.570189501207004 38.0 34.0 40.0 29.0 41.0 49 35.885142948159704 38.0 35.0 40.0 30.0 41.0 50 35.561427061376385 38.0 35.0 40.0 29.0 41.0 51 35.052483622139434 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 7.0 11 5.0 12 13.0 13 11.0 14 15.0 15 34.0 16 97.0 17 256.0 18 713.0 19 1535.0 20 2184.0 21 2587.0 22 2752.0 23 2866.0 24 3340.0 25 4313.0 26 6028.0 27 7841.0 28 10220.0 29 13760.0 30 18588.0 31 25668.0 32 34209.0 33 44316.0 34 53123.0 35 63292.0 36 72179.0 37 69342.0 38 39846.0 39 4278.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78261867872502 3.385412895845702 39.11614369904866 13.715824726380612 2 15.728744981145033 28.581150825253864 38.112476133935424 17.577628059665678 3 15.638141849751877 28.665134549787247 39.67506986577084 16.021653734690037 4 16.107499167402732 3.372380938590521 60.4188429690522 20.101276924954544 5 34.36051358322973 4.006396001878257 38.63582298878631 22.9972674261057 6 16.559894254975415 24.737344004368808 42.104599039772296 16.598162700883485 7 60.77649779594437 1.8060637903964818 32.373243530046935 5.04419488361221 8 57.26593673915607 20.67675160882615 12.800484871552479 9.256826780465303 9 53.312702848620376 4.0696940799748464 13.81842553270711 28.799177538697673 10 39.266735205108525 22.268098389208713 21.336210017231146 17.128956388451616 11 33.35415688407971 20.796935214623925 26.872516429574684 18.976391471721687 12 24.01851779069022 16.32945615366953 30.17808273017436 29.47394332546589 13 24.674252782736588 19.92896549013605 38.95624365209225 16.440538075035114 14 19.885939345547516 28.879230990408068 25.24248749035532 25.9923421736891 15 12.388013081602807 23.686720021844042 41.55642940919726 22.3688374873559 16 14.767482991227219 24.064853638708637 25.99130789136726 35.176355478696884 17 15.35454163710343 27.928518680173013 34.55640665498617 22.160533027737383 18 14.501879290978783 23.66086296379805 32.66367000601952 29.173587739203644 19 15.336751981167787 27.52721713929921 28.76918335136432 28.36684752816868 20 19.943652299106173 24.77437131149067 39.55633425522364 15.725642134179516 21 21.91168470110275 32.95719932895763 26.524790712972173 18.606325256967445 22 16.66849389876858 21.926164653608506 34.09863329933992 27.306708148282986 23 18.63363031026401 31.886717125853544 27.811644777805128 21.66800778607732 24 22.470610867824924 22.671468494726195 25.304958142594437 29.552962494854444 25 15.636073285108196 35.68832522800754 22.125987998187938 26.549613488696327 26 19.820779559271617 22.239759053590305 30.268892718031886 27.670568669106192 27 21.903203586063665 27.399379844319828 23.800284220782043 26.897132348834468 28 15.79845560963703 25.521950573716406 35.8827703045134 22.796823512133166 29 27.72331706752002 18.370095174659255 26.570092278668756 27.336495479151974 30 17.452686755187443 27.293055621634704 31.786805453563826 23.467452169614024 31 23.663965810763568 19.57337922788756 27.183628551984064 29.579026409364808 32 28.39684171550203 27.318912679680697 25.658268983734878 18.625976621082398 33 18.30038454616726 18.130348532456814 30.388455754436556 33.18081116693937 34 28.66389341100104 19.711559346085345 27.174940580480612 24.449606662433006 35 19.07485514876083 18.646041698126087 30.58786538608725 31.691237767025836 36 23.28541848097024 20.437211823088077 33.861368934709894 22.41600076123179 37 20.996344846274617 19.1846959313402 32.52921330418036 27.289745918204815 38 19.83939664106473 20.425834717547843 36.033154954108895 23.701613687278535 39 27.728074766200482 20.374120601455857 28.501924799400946 23.395879832942722 40 18.75815790181351 18.474350832700697 39.3327224172419 23.43476884824389 41 17.689951119817472 21.31945464361734 31.090940307430078 29.899653929135113 42 19.021899893882637 17.768763432741654 39.68479211959613 23.524544553779577 43 24.597922747384818 18.06539560264528 32.622091856681564 24.714589793288336 44 21.320902638867917 17.33974312564255 32.09419415961459 29.24516007587495 45 19.09367908701831 15.343164531563195 32.3780012287274 33.185155152691095 46 30.209111199829554 21.549685888458857 27.934724374104054 20.30647853760754 47 14.674190725797276 18.544061461192694 45.47408398786166 21.307663825148367 48 20.784730683226215 21.665111795576166 28.178608145593852 29.371549375603763 49 19.251717425795416 15.065563156381417 42.00758335798373 23.67513605983944 50 23.63748818332447 15.911606095646292 33.23376642181757 27.217139299211667 51 19.767617447929055 15.87975020013363 29.23233497508414 35.12029737685317 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 210.5 2 340.0 3 1394.0 4 2448.0 5 1732.5 6 1017.0 7 1091.5 8 1166.0 9 1308.0 10 1450.0 11 1482.0 12 1514.0 13 1443.5 14 1373.0 15 1305.0 16 1237.0 17 1251.5 18 1266.0 19 1285.5 20 1305.0 21 1403.0 22 1501.0 23 1722.5 24 1944.0 25 2233.5 26 3007.0 27 3491.0 28 3946.5 29 4402.0 30 5093.5 31 5785.0 32 6497.5 33 7210.0 34 7963.0 35 8716.0 36 9460.0 37 10204.0 38 11013.0 39 11822.0 40 13024.0 41 14226.0 42 16304.5 43 18383.0 44 21114.0 45 23845.0 46 72436.5 47 121028.0 48 91832.0 49 62636.0 50 56986.5 51 51337.0 52 40226.5 53 29116.0 54 25342.0 55 21568.0 56 19355.0 57 17142.0 58 16481.5 59 15821.0 60 14270.5 61 12720.0 62 11041.5 63 9363.0 64 7475.0 65 5587.0 66 4637.5 67 3688.0 68 3123.5 69 2559.0 70 2101.0 71 1643.0 72 1315.0 73 987.0 74 745.0 75 398.0 76 293.0 77 200.5 78 108.0 79 67.0 80 26.0 81 18.5 82 11.0 83 21.5 84 32.0 85 17.0 86 2.0 87 2.5 88 3.0 89 3.0 90 3.0 91 2.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 483427.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.464048525445342 #Duplication Level Percentage of deduplicated Percentage of total 1 74.18595673489365 21.858186291434954 2 10.419471747103076 6.139996423323036 3 3.766907264211252 3.3296501527071865 4 1.899090663382076 2.238195978404387 5 1.2045341370995624 1.7745226133028469 6 0.9059716572126687 1.6016155722475323 7 0.7520858855060252 1.551164651809644 8 0.6375744020057242 1.5028418495422764 9 0.5772291138688465 1.5306755959198357 >10 5.4790948697499395 27.637309915617514 >50 0.09064481973579538 1.8334373209571688 >100 0.06515096418510294 3.6814803790791264 >500 0.0028326506167436058 0.5408295818733335 >1k 0.009206114504416718 6.288813116382048 >5k 0.0021244879625577045 4.757297247959878 >10k+ 0.0021244879625577045 13.733983309439257 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGC 27226 5.631874098881527 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCG 22115 4.574630709496987 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTC 16481 3.409201389248015 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTGTCTTT 8832 1.8269562932976435 No Hit GCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 8471 1.7522811096608175 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTA 5497 1.1370899846305647 No Hit GAACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCT 4975 1.0291109102305 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTC 4086 0.8452155134074016 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCT 3780 0.7819174353108123 No Hit CTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGCT 2839 0.5872655023405808 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 2623 0.542584506037106 TruSeq Adapter, Index 16 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGC 2240 0.463358480184185 TruSeq Adapter, Index 16 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGT 1926 0.3984055503726519 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATG 1601 0.3311771994530715 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1374 0.2842207820415492 No Hit TGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTGCTT 1329 0.2749122411449919 TruSeq Adapter, Index 16 (95% over 23bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTAT 1135 0.2347820870576116 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTT 1118 0.2312655271633566 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCTGTCTT 1114 0.23043810130588485 No Hit CGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 862 0.17831027228516405 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGC 602 0.12452759154949972 No Hit TCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGCCGTCTTCTG 592 0.12245902690582032 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGCTGTCTTTCG 536 0.11087506490121568 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGCTGTCTTTCGTATGC 489 0.10115281107592251 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6594584084049918 0.0 2 0.0 0.0 0.0 3.646052040949306 0.0 3 0.0 0.0 0.0 4.4455522757313926 0.0 4 0.0 0.0 0.0 6.533561427061376 0.0 5 0.0 0.0 0.0 11.692561648397794 0.0 6 0.0 0.0 0.0 12.686093246757007 0.0 7 0.0 0.0 0.0 14.230690466192414 0.0 8 0.0 0.0 0.0 16.09239864550387 0.0 9 0.0 0.0 0.0 16.5406566037892 0.0 10 0.0 0.0 0.0 22.314020524298396 0.0 11 0.0 0.0 0.0 24.05223539438219 0.0 12 0.0 0.0 0.0 31.6089088942074 0.0 13 0.0 0.0 0.0 32.44543643611134 0.0 14 0.0 0.0 0.0 32.856253374346075 0.0 15 0.0 0.0 0.0 34.40622886185505 0.0 16 0.0 0.0 0.0 35.35963030612688 0.0 17 0.0 0.0 0.0 36.25366394512512 0.0 18 0.0 0.0 0.0 36.95594164165427 0.0 19 0.0 0.0 0.0 39.655625358120254 0.0 20 0.0 0.0 0.0 40.51180426413916 0.0 21 0.0 0.0 0.0 41.31068392952814 0.0 22 0.0 0.0 0.0 42.186514199662 0.0 23 0.0 0.0 0.0 42.93223175370842 0.0 24 0.0 0.0 0.0 43.515153270297276 0.0 25 0.0 0.0 0.0 44.07552743227002 0.0 26 0.0 0.0 0.0 44.5757063631117 0.0 27 0.0 0.0 0.0 45.068438461236134 0.0 28 0.0 0.0 0.0 45.535313501314576 0.0 29 0.0 0.0 0.0 46.01211765168267 0.0 30 0.0 0.0 0.0 46.59524602473589 0.0 31 0.0 0.0 0.0 47.09273582154079 0.0 32 0.0 0.0 0.0 47.58774334077327 0.0 33 0.0 0.0 0.0 48.044068701168946 0.0 34 0.0 0.0 0.0 48.49398151116922 0.0 35 0.0 0.0 0.0 48.965614249928116 0.0 36 0.0 0.0 0.0 49.43455785465024 0.0 37 0.0 0.0 0.0 49.90701801926661 0.0 38 0.0 0.0 0.0 50.379685040347354 0.0 39 0.0 0.0 0.0 50.86331545403959 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 40 6.8012014E-9 45.000004 1 CCTCGAA 20 7.029225E-4 45.000004 42 GGAACTA 40 6.8012014E-9 45.000004 8 TTGCGGA 20 7.029225E-4 45.000004 3 CGTACTT 20 7.029225E-4 45.000004 40 GTATATG 20 7.029225E-4 45.000004 16 CTTTACG 20 7.029225E-4 45.000004 1 TTGCACG 20 7.029225E-4 45.000004 1 TTTCTCG 35 1.2099736E-7 45.000004 1 CCTTGCG 20 7.029225E-4 45.000004 1 TCGTTTA 25 3.887441E-5 45.0 9 CCGATAG 25 3.887441E-5 45.0 20 ATTGTCG 25 3.887441E-5 45.0 1 TAAGTTG 25 3.887441E-5 45.0 15 GTCGTTT 25 3.887441E-5 45.0 8 CCGGTCG 25 3.887441E-5 45.0 14 CACCGTG 25 3.887441E-5 45.0 16 CGCAATA 45 3.8380676E-10 45.0 28 CCACCGT 45 3.8380676E-10 45.0 15 ACGGCTG 3195 0.0 43.80282 8 >>END_MODULE