##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933837.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 498361 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.48253976535082 28.0 16.0 31.0 16.0 33.0 2 25.334169407317187 28.0 16.0 31.0 16.0 34.0 3 26.49846797803199 30.0 16.0 33.0 16.0 34.0 4 31.098121642744918 33.0 28.0 35.0 19.0 37.0 5 33.217214027582415 35.0 32.0 35.0 28.0 37.0 6 31.512094646250407 35.0 28.0 36.0 17.0 37.0 7 33.138160891402016 35.0 32.0 35.0 28.0 37.0 8 32.00950515790762 35.0 31.0 36.0 17.0 37.0 9 34.206312291692164 35.0 32.0 38.0 28.0 39.0 10 33.435134370466386 35.0 32.0 37.0 27.0 39.0 11 34.15943262012878 35.0 32.0 39.0 27.0 39.0 12 34.35409873565548 35.0 33.0 39.0 27.0 39.0 13 34.620217071560575 35.0 33.0 38.0 29.0 39.0 14 34.57723016046601 36.0 33.0 39.0 27.0 40.0 15 35.110104923940675 37.0 33.0 39.0 27.0 40.0 16 34.897112735547125 36.0 32.0 39.0 27.0 40.0 17 34.134583163610316 36.0 32.0 38.0 27.0 40.0 18 34.63098637333178 36.0 32.0 39.0 27.0 40.0 19 34.28484773086176 36.0 32.0 39.0 27.0 40.0 20 33.89389418513888 36.0 32.0 39.0 25.0 40.0 21 33.90222549517318 36.0 32.0 39.0 25.0 40.0 22 35.151079237741314 37.0 33.0 39.0 28.0 40.0 23 35.44441679826471 37.0 34.0 39.0 29.0 40.0 24 35.88283192304374 38.0 34.0 39.0 30.0 40.0 25 33.723469533129595 36.0 32.0 39.0 24.0 40.0 26 34.824488673872956 37.0 33.0 39.0 27.0 40.0 27 34.78092788159587 37.0 33.0 39.0 27.0 40.0 28 35.0230254775153 37.0 33.0 39.0 27.0 40.0 29 35.26355192320426 37.0 34.0 40.0 27.0 40.0 30 33.29100190424211 36.0 31.0 39.0 23.0 40.0 31 34.51453464456488 37.0 33.0 39.0 25.0 40.0 32 34.519974476333424 37.0 33.0 39.0 26.0 40.0 33 34.901160002488155 37.0 34.0 39.0 27.0 40.0 34 34.93339968416469 37.0 34.0 40.0 26.0 40.0 35 35.26128449056006 38.0 34.0 40.0 27.0 41.0 36 35.3435662100365 38.0 34.0 40.0 27.0 41.0 37 35.249718577497035 38.0 34.0 40.0 27.0 41.0 38 34.9533851966747 37.0 34.0 40.0 27.0 41.0 39 34.49947126681261 37.0 33.0 40.0 25.0 40.0 40 34.23021263702417 37.0 33.0 39.0 24.0 40.0 41 34.10626032133333 37.0 33.0 39.0 24.0 40.0 42 34.68618330888653 37.0 33.0 40.0 26.0 40.0 43 35.04820802590893 38.0 34.0 40.0 27.0 40.0 44 35.602031459123005 38.0 35.0 40.0 30.0 41.0 45 35.9608617046679 38.0 35.0 40.0 30.0 41.0 46 35.48958084601323 38.0 35.0 40.0 28.0 41.0 47 34.96861311378699 38.0 34.0 40.0 26.0 41.0 48 35.141869046735195 38.0 34.0 40.0 26.0 41.0 49 35.464731389494766 38.0 35.0 40.0 28.0 41.0 50 35.16241038122967 38.0 34.0 40.0 26.0 41.0 51 34.806824771601306 37.0 34.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 7.0 11 5.0 12 7.0 13 8.0 14 21.0 15 41.0 16 159.0 17 601.0 18 1383.0 19 2370.0 20 3165.0 21 3375.0 22 3364.0 23 3384.0 24 3608.0 25 4522.0 26 6003.0 27 8180.0 28 10890.0 29 14784.0 30 19860.0 31 26756.0 32 36228.0 33 46946.0 34 57164.0 35 68034.0 36 72461.0 37 64799.0 38 36281.0 39 3952.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.41425793751919 3.1615636054988254 34.696133927012745 11.728044529969239 2 14.292049337729077 36.059202064367 33.0260594227879 16.622689175116033 3 13.275517145201974 36.39329722831442 36.20066578243482 14.130519844048791 4 14.382345327985135 2.7510178364679416 65.2789845112278 17.587652324319116 5 38.63705225729942 3.342356243767068 36.94711263521825 21.07347886371526 6 14.22161846532935 30.073179883658636 39.62208118211497 16.083120468897043 7 54.372633492588704 1.1132492309791497 38.9683382126611 5.545779063771041 8 49.731419593427255 25.266824651206655 14.790081888430272 10.211673866935815 9 47.14273388166409 3.1932675309665077 14.445351863408252 35.21864672396114 10 40.288866905716944 21.459945702011193 21.507300932456594 16.743886459815275 11 32.21098761740987 18.72457917052097 29.76657483230028 19.297858379768883 12 20.147844634712587 16.003860655227836 31.719576772660783 32.12871793739879 13 22.48309960049041 20.721123843960505 43.02523672598779 13.7705398295613 14 18.98764148880029 31.988458165867716 24.57194684174725 24.45195350358475 15 9.068927945806353 23.219112249955355 45.095824111437295 22.616135692801002 16 11.096173255932948 26.006248482525717 24.18146684832882 38.71611141321251 17 12.207014593838602 30.57121243435983 35.62517933786953 21.59659363393203 18 11.495883506133104 24.217585244431245 34.129075108204695 30.157456141230952 19 12.010971966104892 27.809961052329534 29.3405784160478 30.838488565517768 20 16.821139695923236 26.47418236980823 42.63897054544798 14.065707388820552 21 18.238184769674994 37.606072706331354 27.334201512558167 16.821541011435485 22 13.072250838247776 22.202780715184375 36.43282680627096 28.29214164029689 23 16.300232161023835 34.97805807436778 28.354144886939388 20.367564877668997 24 19.98611448327618 24.845844678857294 24.305673999369933 30.86236683849659 25 11.90743256394461 42.87253617357699 20.318002411906228 24.902028850572176 26 15.121568501548074 25.14984117938603 31.249636307817024 28.478954011248874 27 25.155660254313638 29.301048838091265 22.31133656124777 23.23195434634733 28 13.887322643625804 29.58718679832491 34.43006174239156 22.095428815657726 29 21.826146106938545 25.140610922604296 28.44985863661081 24.583384333846347 30 23.32064507455439 33.90152921275942 27.01615896910071 15.761666743585472 31 31.01125489354103 22.77906979077416 20.022232879378603 26.187442436306213 32 24.28520690824523 36.96055670487859 23.67881916923676 15.075417217639423 33 21.72421196682726 25.14602868201966 18.513487211077916 34.61627214007517 34 29.525584867194667 29.583976274226913 22.203583346208873 18.686855512369547 35 22.46905355756169 28.81987153890453 21.70314290243418 27.007932001099604 36 24.845242705588923 33.42817756606155 17.821017294692002 23.90556243365753 37 25.92738998436876 21.107189366744187 35.536689267418595 17.428731381468452 38 26.713767730620972 30.55877165348011 19.07151643086036 23.655944185038557 39 26.14851483161804 25.02944652571128 31.407353304130943 17.414685338539734 40 19.1828814855095 35.84891273594844 25.1275681684562 19.840637610085864 41 27.36991859314834 25.610752045204176 18.043747403990277 28.975581957657198 42 19.19411831985248 27.010941867441474 31.21612646254422 22.57881335016183 43 22.72750074745014 23.428398289593286 20.305160315514257 33.53894064744232 44 25.335850919313508 18.745246919401797 30.428344111999134 25.490558049285557 45 22.039846617211218 17.93318498036564 26.482208680053215 33.544759722369925 46 30.276646848368955 25.62800861223089 25.85595582318841 18.239388716211742 47 13.190638914361278 23.480970621697924 44.05461101490686 19.273779449033935 48 24.16481225457048 25.22508783793274 23.76088819149171 26.849211716005065 49 19.252309069128604 18.779760053455227 40.02339669436413 21.944534183052046 50 24.5348251568642 17.942214579391244 28.016839198893972 29.506121064850582 51 19.767999502368767 17.511201719235654 25.656903329112836 37.06389544928275 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 40.0 1 118.5 2 197.0 3 1296.0 4 2395.0 5 1615.5 6 836.0 7 1025.0 8 1214.0 9 1464.0 10 1714.0 11 1948.5 12 2183.0 13 2177.0 14 2171.0 15 2152.5 16 2134.0 17 1983.5 18 1833.0 19 1854.0 20 1875.0 21 1939.0 22 2003.0 23 2058.5 24 2114.0 25 2461.5 26 3242.0 27 3675.0 28 4017.5 29 4360.0 30 4807.5 31 5255.0 32 6428.5 33 7602.0 34 8061.5 35 8521.0 36 9200.0 37 9879.0 38 11096.5 39 12314.0 40 13597.5 41 14881.0 42 16800.0 43 18719.0 44 22236.5 45 25754.0 46 90824.5 47 155895.0 48 114831.5 49 73768.0 50 64543.5 51 55319.0 52 41414.0 53 27509.0 54 22305.5 55 17102.0 56 14550.5 57 11999.0 58 10141.0 59 8283.0 60 6886.0 61 5489.0 62 4637.0 63 3785.0 64 2982.0 65 2179.0 66 1686.0 67 1193.0 68 928.0 69 663.0 70 498.0 71 333.0 72 263.0 73 193.0 74 145.0 75 70.0 76 43.0 77 26.5 78 10.0 79 13.5 80 17.0 81 11.0 82 5.0 83 3.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 498361.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.70604819520176 #Duplication Level Percentage of deduplicated Percentage of total 1 74.83646959640295 20.73422833396691 2 10.992481403336736 6.091164390914133 3 4.0169207647092415 3.338790009100228 4 2.039195333250888 2.259921767299185 5 1.1880014265576353 1.645741239008714 6 0.8400723992530954 1.396505182869902 7 0.6330173859838208 1.2276887143127864 8 0.5301106191238476 1.1749816289786852 9 0.4645159337911431 1.1582910764150902 >10 4.2466294975613295 21.404608526680736 >50 0.10993298508367248 2.1338813906785594 >100 0.08153969754550543 4.646572617040486 >500 0.006552297124192401 1.2227610350972142 >1k 0.008008363151790711 4.6915537636631655 >5k 0.0036401650689957777 6.779445461830645 >10k+ 0.002912132055196622 20.093864862143565 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGC 35181 7.059340518218721 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCG 29673 5.954117597484554 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTC 23679 4.751375007273843 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGTAGACT 11085 2.224291226640929 No Hit GCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 9668 1.9399591862124044 TruSeq Adapter, Index 15 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTA 6656 1.3355780247651803 No Hit GAACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCT 6452 1.2946438425157667 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTC 5496 1.1028150276606716 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCT 5338 1.0711111021929887 No Hit CTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGCT 4150 0.8327296879169919 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 3237 0.6495291565752537 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 2740 0.5498022517813392 TruSeq Adapter, Index 15 (95% over 22bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGGTAGACTCGT 2530 0.5076641229951783 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATG 2065 0.41435826639725015 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTAT 1572 0.31543399262783406 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1544 0.3098155754563459 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTT 1453 0.29155571964900945 No Hit TGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGCTT 1413 0.2835294094040264 TruSeq Adapter, Index 15 (95% over 24bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGGTAGAC 1325 0.26587152686506366 No Hit CGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTG 1230 0.2468090400332289 No Hit GCTGTCTCTTATACACATCTGACGCAGGTCGACTCGTATGCCGTCTTCTGC 941 0.18881894851322636 TruSeq Adapter, Index 21 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTG 736 0.1476841085076882 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCC 667 0.13383872333509245 No Hit TTCCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCT 663 0.13303609231059413 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCAGGTAGACTCG 656 0.1316314880177221 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGC 647 0.1298255682126009 No Hit TGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTG 629 0.12621372860235852 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGC 590 0.11838807611350005 No Hit GAATGACTCTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCT 533 0.1069505840143992 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9376736943701454 0.0 2 0.0 0.0 0.0 4.659072439456539 0.0 3 0.0 0.0 0.0 5.6754039742275175 0.0 4 0.0 0.0 0.0 8.24181667506085 0.0 5 0.0 0.0 0.0 15.136216517745169 0.0 6 0.0 0.0 0.0 16.291804535266603 0.0 7 0.0 0.0 0.0 18.346539957982266 0.0 8 0.0 0.0 0.0 20.772692887284517 0.0 9 0.0 0.0 0.0 21.335136577701707 0.0 10 0.0 0.0 0.0 28.808634704561552 0.0 11 0.0 0.0 0.0 31.06563314545079 0.0 12 0.0 0.0 0.0 40.58042262536595 0.0 13 0.0 0.0 0.0 41.632872556239356 0.0 14 0.0 0.0 0.0 42.148161673967266 0.0 15 0.0 0.0 0.0 43.932009125914746 0.0 16 0.0 0.0 0.0 45.04545901465002 0.0 17 0.0 0.0 0.0 46.08045172074059 0.0 18 0.0 0.0 0.0 46.97197413120208 0.0 19 0.0 0.0 0.0 50.23547187681219 0.0 20 0.0 0.0 0.0 51.14786269391064 0.0 21 0.0 0.0 0.0 51.982197643876624 0.0 22 0.0 0.0 0.0 52.965821964399304 0.0 23 0.0 0.0 0.0 53.74457471591878 0.0 24 0.0 0.0 0.0 54.32808747072905 0.0 25 0.0 0.0 0.0 54.85361013401931 0.0 26 0.0 0.0 0.0 55.377126219748334 0.0 27 0.0 0.0 0.0 55.865928513667804 0.0 28 0.0 0.0 0.0 56.29834597811627 0.0 29 0.0 0.0 0.0 56.74621408978632 0.0 30 0.0 0.0 0.0 57.29561502605541 0.0 31 0.0 0.0 0.0 57.76856535724104 0.0 32 0.0 0.0 0.0 58.19235453817614 0.0 33 0.0 0.0 0.0 58.596679916767165 0.0 34 0.0 0.0 0.0 58.97732768013548 0.0 35 0.0 0.0 0.0 59.38787344916637 0.0 36 0.0 0.0 0.0 59.804438950880986 0.0 37 0.0 0.0 0.0 60.19752749512903 0.0 38 0.0 0.0 0.0 60.57295815683811 0.0 39 0.0 0.0 0.0 61.03427033816852 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTG 135 0.0 45.000004 17 CCCTCGA 70 0.0 45.000004 41 TCTCTCG 45 3.8380676E-10 45.000004 1 GCGCGCG 35 1.2100827E-7 45.000004 1 CGCATGG 35 1.2100827E-7 45.000004 2 CAACATA 35 1.2100827E-7 45.000004 10 CGTTCGG 35 1.2100827E-7 45.000004 2 AGGCACG 45 3.8380676E-10 45.000004 10 CGAGGCA 45 3.8380676E-10 45.000004 34 CTTCTCG 35 1.2100827E-7 45.000004 1 CTTTCCG 35 1.2100827E-7 45.000004 1 CCGGTGA 115 0.0 45.000004 18 TTGTTCG 45 3.8380676E-10 45.000004 1 CGACTGA 35 1.2100827E-7 45.000004 41 TCACGGG 20 7.029437E-4 45.0 3 CTTGTCG 25 3.887615E-5 45.0 1 AACGTAG 20 7.029437E-4 45.0 45 CGGGTAT 25 3.887615E-5 45.0 6 CGGGTAC 20 7.029437E-4 45.0 6 TCGTTCG 20 7.029437E-4 45.0 1 >>END_MODULE