##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933835.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 351805 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.92211025994514 25.0 16.0 31.0 16.0 33.0 2 24.736103807507 28.0 16.0 31.0 16.0 34.0 3 25.861750117252456 30.0 16.0 33.0 16.0 34.0 4 30.546623839911316 32.0 28.0 35.0 19.0 37.0 5 33.03922911840366 35.0 32.0 35.0 28.0 37.0 6 31.02835661801282 35.0 28.0 35.0 17.0 37.0 7 33.02610821335683 35.0 32.0 35.0 28.0 37.0 8 31.581549437898836 35.0 28.0 36.0 17.0 37.0 9 34.04056792825571 35.0 32.0 37.0 28.0 39.0 10 33.59420986057617 35.0 32.0 37.0 28.0 39.0 11 34.33345461264052 35.0 32.0 39.0 27.0 39.0 12 34.47578914455451 37.0 34.0 39.0 27.0 39.0 13 34.68119554867043 35.0 34.0 38.0 30.0 39.0 14 34.42013331248845 36.0 32.0 38.0 27.0 40.0 15 35.06054490413724 37.0 33.0 39.0 27.0 40.0 16 34.55015988971163 36.0 32.0 38.0 27.0 40.0 17 34.02792456048095 36.0 32.0 38.0 27.0 40.0 18 34.36029050184051 36.0 32.0 38.0 27.0 40.0 19 34.060974119185346 36.0 32.0 39.0 27.0 40.0 20 33.78126518952261 36.0 31.0 39.0 25.0 40.0 21 33.85651426216228 36.0 32.0 39.0 25.0 40.0 22 35.14601554838618 37.0 33.0 39.0 28.0 40.0 23 35.38724009039098 37.0 33.0 39.0 29.0 40.0 24 35.6663322010773 37.0 34.0 39.0 30.0 40.0 25 33.794397464504485 36.0 32.0 39.0 24.0 40.0 26 34.82823154872728 37.0 33.0 39.0 27.0 40.0 27 34.91570898651241 37.0 33.0 39.0 27.0 40.0 28 35.01832833529939 37.0 33.0 39.0 27.0 40.0 29 35.52155881809525 38.0 34.0 40.0 27.0 40.0 30 33.9575759298475 37.0 32.0 39.0 24.0 40.0 31 34.54149031423658 37.0 33.0 39.0 25.0 40.0 32 34.79328605335342 37.0 33.0 39.0 27.0 40.0 33 35.04565313170649 37.0 34.0 39.0 27.0 40.0 34 35.2470999559415 38.0 34.0 40.0 27.0 40.0 35 35.49457796222339 38.0 35.0 40.0 29.0 40.0 36 35.521058540953085 38.0 35.0 40.0 28.0 41.0 37 36.043129006125554 38.0 35.0 40.0 30.0 41.0 38 35.44398175125425 38.0 34.0 40.0 30.0 40.0 39 35.44536035587897 38.0 34.0 40.0 29.0 40.0 40 35.09554156421881 37.0 33.0 40.0 28.0 40.0 41 34.05204872017168 37.0 32.0 39.0 24.0 40.0 42 35.302895069711916 38.0 34.0 40.0 29.0 40.0 43 35.497113457739374 38.0 35.0 40.0 30.0 40.0 44 36.078097241369505 38.0 35.0 40.0 31.0 41.0 45 36.265823396483846 38.0 35.0 40.0 31.0 41.0 46 36.022151475959696 38.0 35.0 40.0 30.0 41.0 47 35.307582325435966 38.0 34.0 40.0 28.0 41.0 48 35.62483193814755 38.0 35.0 40.0 29.0 41.0 49 36.074305368030586 38.0 35.0 40.0 30.0 41.0 50 35.76373843464419 38.0 35.0 40.0 29.0 41.0 51 35.37534145336195 38.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 11.0 11 5.0 12 14.0 13 12.0 14 14.0 15 23.0 16 56.0 17 167.0 18 456.0 19 876.0 20 1316.0 21 1819.0 22 1999.0 23 2160.0 24 2357.0 25 2986.0 26 4248.0 27 5644.0 28 7693.0 29 10424.0 30 14046.0 31 19158.0 32 26462.0 33 34577.0 34 43122.0 35 51172.0 36 52078.0 37 43934.0 38 22799.0 39 2174.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 53.54187689202825 2.953909125794119 32.00636716362758 11.497846818550048 2 13.93868762524694 39.077329770753686 29.671551001264906 17.312431602734467 3 12.225238413325563 39.220306703997956 33.96995494663237 14.584499936044114 4 14.313042736743368 2.965279060843365 64.98287403533207 17.738804167081195 5 40.02359261522719 3.302966131805972 34.729182359545774 21.944258893421072 6 14.974488708233254 31.526555904549397 37.55915919330311 15.939796193914244 7 50.394963118773184 1.3680874348005287 42.202072170662724 6.034877275763562 8 43.87544236153551 27.142593197936353 16.46281320617956 12.519151234348575 9 41.23619618822927 3.7566265402708887 16.94717243927744 38.0600048322224 10 39.266639189323634 16.31983627293529 25.11305979164594 19.300464746095138 11 32.77497477295661 18.250166995921035 28.697431815920755 20.277426415201603 12 20.132175494947486 14.283480905615326 32.71727235258168 32.8670712468555 13 20.916701013345463 21.511064368044796 44.346441920950525 13.225792697659214 14 18.415315302511335 32.31392390670968 23.86577791674365 25.40498287403533 15 8.819942866076378 23.06277625389065 46.300081010787224 21.817199869245744 16 9.798041528687767 24.811188016088458 24.141498841687866 41.24927161353591 17 11.059820070777846 29.48025184406134 35.80563096033314 23.654297124827675 18 10.053580818919572 24.021830275294555 34.49695143616492 31.427637469620954 19 11.457199300748995 27.67527465499353 29.01863248106195 31.848893563195517 20 14.507468626085473 25.19435482724805 45.41976378959936 14.878412757067125 21 18.749875641335397 36.38805588323077 26.8984238427538 17.963644632680037 22 12.352297437500887 21.44568724151163 36.10750273589062 30.094512585096854 23 15.613763306377113 34.004064751780106 28.355196770938445 22.026975170904336 24 21.243018149258823 22.489163030656186 23.460155483861797 32.80766333622319 25 10.567501883145493 40.472705049672406 20.333139096942908 28.626653970239197 26 13.929875925583776 20.129333011185174 30.13970807691761 35.801082986313446 27 20.07703130995864 27.67015818422137 21.60088685493384 30.651923650886143 28 8.794076263839342 24.211708190616964 38.45994229757962 28.53427324796407 29 17.05035459984935 15.817569392134848 24.404712838077913 42.727363169937895 30 12.860817782578419 28.702548286692913 32.63228208808857 25.8043518426401 31 19.68391580563096 22.441977800201816 25.707423146345278 32.16668324782195 32 23.66339307286707 29.306576086184105 19.623370901493725 27.406659939455096 33 13.61748696010574 22.66227029178096 26.509856312445816 37.21038643566749 34 23.83564758886315 26.104233879563964 22.708602777106634 27.351515754466256 35 20.09095948039397 20.589246883927174 20.741319765210843 38.57847387046802 36 15.310470288938474 26.707977430678927 27.852077145009307 30.12947513537329 37 13.629425391907448 19.78795071133156 31.194838049487643 35.38778584727334 38 18.319239351345207 21.528687767371128 34.129702534074276 26.02237034720939 39 18.25130398942596 28.434217819530705 25.73897471610693 27.575503474936397 40 22.71201375762141 18.961356433251375 34.68825059336849 23.638379215758732 41 16.938076491238043 38.83742414121459 20.388283281931752 23.83621608561561 42 26.306902971816776 16.96110060971277 32.22353292306818 24.50846349540228 43 22.283367206264835 25.57467915464533 22.05227327638891 30.08968036270093 44 19.176248205682125 17.665468086013558 32.10926507582326 31.04901863248106 45 17.942041756086468 14.084791290629752 30.418555734000368 37.554611219283416 46 30.444422336237402 22.952772132289194 24.84814030499851 21.75466522647489 47 11.298872955188244 16.656954847145435 50.17154389505551 21.87262830261082 48 19.648953255354527 25.866317988658487 25.20003979477267 29.28468896121431 49 20.31437870411165 13.132843478631628 42.89904918918151 23.653728628075214 50 24.896178280581573 16.71693125453021 30.321911286081775 28.064979178806443 51 18.714344594306507 14.487571239749292 27.088301758076206 39.70978240786799 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 60.0 1 121.0 2 182.0 3 718.5 4 1255.0 5 919.0 6 583.0 7 774.5 8 966.0 9 1114.0 10 1262.0 11 1282.0 12 1302.0 13 1289.5 14 1277.0 15 1124.5 16 972.0 17 924.0 18 876.0 19 969.0 20 1062.0 21 1087.0 22 1112.0 23 1261.5 24 1411.0 25 1563.0 26 1874.0 27 2033.0 28 2441.0 29 2849.0 30 2943.5 31 3038.0 32 3169.0 33 3300.0 34 3774.0 35 4248.0 36 4943.0 37 5638.0 38 6116.0 39 6594.0 40 7345.5 41 8097.0 42 9477.5 43 10858.0 44 13721.5 45 16585.0 46 67894.0 47 119203.0 48 86618.0 49 54033.0 50 48397.0 51 42761.0 52 30457.5 53 18154.0 54 15046.0 55 11938.0 56 10179.5 57 8421.0 58 7364.0 59 6307.0 60 5486.5 61 4666.0 62 4078.0 63 3490.0 64 2826.5 65 2163.0 66 1686.0 67 1209.0 68 1031.5 69 854.0 70 705.0 71 556.0 72 466.5 73 377.0 74 272.0 75 123.0 76 79.0 77 74.0 78 69.0 79 61.5 80 54.0 81 33.0 82 12.0 83 8.0 84 4.0 85 8.0 86 12.0 87 6.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 351805.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.926862892795725 #Duplication Level Percentage of deduplicated Percentage of total 1 74.86186028154191 19.40933187419167 2 10.62908389247029 5.511576015122014 3 4.048809367188528 3.1491877602649194 4 2.0446871025742226 2.1204928866843846 5 1.2147524448537472 1.5747360043205754 6 0.870499495680393 1.3541592643652023 7 0.6709643467964741 1.21772004377425 8 0.5854492829890804 1.2143090632594762 9 0.5481734859448318 1.2791176930401784 >10 4.26917510853835 18.78171145947329 >50 0.13375433057053895 2.4675601540626197 >100 0.09538218655440073 4.891630306561874 >500 0.0076744288032276455 1.2145933116357073 >1k 0.0120598166907863 7.50643111951223 >5k 0.004385387887558654 8.646835604951606 >10k+ 0.003289040915668991 19.660607438780005 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 27932 7.939625644888504 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCG 22036 6.263697218629638 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTC 19199 5.4572845752618635 No Hit GCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 9552 2.7151404897599525 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTCTAGAT 9041 2.5698895695058344 No Hit GAACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 5961 1.6944045707138897 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTA 5866 1.6674009749719305 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTC 4710 1.3388098520487202 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCT 4288 1.2188570372791745 No Hit CTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGCT 2915 0.8285840167138045 Illumina Single End Adapter 1 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 2869 0.8155085914071716 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGC 2441 0.693850286380239 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGT 2119 0.6023223092338086 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATG 1861 0.5289862281661716 No Hit TGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTGCTT 1583 0.44996517957391163 Illumina Single End Adapter 1 (95% over 23bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTAT 1364 0.38771478517928964 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTT 1196 0.33996105797245635 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCCTCTAGA 1062 0.3018717755574821 No Hit CGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 763 0.21688151106436807 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 716 0.20352183738150398 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCCTCTAGATCG 588 0.16713804522391665 No Hit TCCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 570 0.16202157445175594 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 556 0.15804209718451984 No Hit TGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCTG 542 0.15406261991728373 No Hit TTCCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 538 0.15292562641235913 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGC 445 0.1264905274228621 No Hit GCACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 394 0.11199386023507339 No Hit GAATGATACTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGT 369 0.10488765082929463 No Hit TGCCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCGTCTTCT 360 0.10232941544321428 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCCCTCTAGATCGTATGCCG 357 0.10147667031452083 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9812253947499325 0.0 2 0.0 0.0 0.0 5.501627321953923 0.0 3 0.0 0.0 0.0 6.598541805829934 0.0 4 0.0 0.0 0.0 9.95921035801083 0.0 5 0.0 0.0 0.0 17.899404499651794 0.0 6 0.0 0.0 0.0 19.306433961995992 0.0 7 0.0 0.0 0.0 21.521013061212887 0.0 8 0.0 0.0 0.0 24.24155427012123 0.0 9 0.0 0.0 0.0 24.768266511277556 0.0 10 0.0 0.0 0.0 32.548144568724155 0.0 11 0.0 0.0 0.0 34.75561745853527 0.0 12 0.0 0.0 0.0 45.066443057944035 0.0 13 0.0 0.0 0.0 46.17188499310698 0.0 14 0.0 0.0 0.0 46.76965932832109 0.0 15 0.0 0.0 0.0 48.93676894870738 0.0 16 0.0 0.0 0.0 50.22981481218289 0.0 17 0.0 0.0 0.0 51.19227981410156 0.0 18 0.0 0.0 0.0 52.03337075936954 0.0 19 0.0 0.0 0.0 55.57368428532852 0.0 20 0.0 0.0 0.0 56.49209078893137 0.0 21 0.0 0.0 0.0 57.269510097923565 0.0 22 0.0 0.0 0.0 58.169156208695156 0.0 23 0.0 0.0 0.0 58.83912963147198 0.0 24 0.0 0.0 0.0 59.37891729793493 0.0 25 0.0 0.0 0.0 59.8257557453703 0.0 26 0.0 0.0 0.0 60.28879635025085 0.0 27 0.0 0.0 0.0 60.751836955131395 0.0 28 0.0 0.0 0.0 61.153195662369775 0.0 29 0.0 0.0 0.0 61.56393456602379 0.0 30 0.0 0.0 0.0 62.05056778613152 0.0 31 0.0 0.0 0.0 62.49740623356689 0.0 32 0.0 0.0 0.0 62.86863461292477 0.0 33 0.0 0.0 0.0 63.222808089708785 0.0 34 0.0 0.0 0.0 63.59403646906667 0.0 35 0.0 0.0 0.0 63.97464504484018 0.0 36 0.0 0.0 0.0 64.35383237873253 0.0 37 0.0 0.0 0.0 64.69805716234846 0.0 38 0.0 0.0 0.0 65.0360284816873 0.0 39 0.0 0.0 0.0 65.40043490001564 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTAAT 50 2.1827873E-11 45.000004 25 CGCGGGC 25 3.8852682E-5 45.000004 4 CGTGCGG 25 3.8852682E-5 45.000004 2 TGGACCC 25 3.8852682E-5 45.000004 37 GTTTACG 25 3.8852682E-5 45.000004 1 TTTCGCG 50 2.1827873E-11 45.000004 1 ATCAGTG 25 3.8852682E-5 45.000004 38 CATTGGT 25 3.8852682E-5 45.000004 28 GCTATAC 25 3.8852682E-5 45.000004 33 GGCCGAT 25 3.8852682E-5 45.000004 8 ACCGAGG 60 0.0 45.000004 17 GACCACT 30 2.1611922E-6 45.000004 13 CCTCCGC 30 2.1611922E-6 45.000004 45 CGGGCTT 50 2.1827873E-11 45.000004 6 GTCCCGT 30 2.1611922E-6 45.000004 27 CGACTTG 25 3.8852682E-5 45.000004 19 TCGACTT 25 3.8852682E-5 45.000004 18 TGTAATC 25 3.8852682E-5 45.000004 24 TGTCGTG 25 3.8852682E-5 45.000004 1 GCCAACC 30 2.1611922E-6 45.000004 16 >>END_MODULE