##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933833.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 421899 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.082723590243162 28.0 16.0 31.0 16.0 34.0 2 25.66731137073091 30.0 16.0 33.0 16.0 34.0 3 26.65702454852939 30.0 16.0 33.0 16.0 34.0 4 31.008466481314247 33.0 28.0 35.0 19.0 37.0 5 33.1450939679876 35.0 32.0 35.0 28.0 37.0 6 31.37050099668404 35.0 28.0 37.0 17.0 37.0 7 33.005702786685916 35.0 32.0 35.0 28.0 37.0 8 31.932877300017303 35.0 30.0 37.0 17.0 37.0 9 34.06301745204421 35.0 32.0 38.0 28.0 39.0 10 33.292266632535274 34.0 32.0 37.0 27.0 39.0 11 33.911360301873195 35.0 32.0 37.0 27.0 39.0 12 34.05002619110261 35.0 32.0 39.0 27.0 39.0 13 34.13012593061372 35.0 32.0 37.0 27.0 39.0 14 34.13594959931169 36.0 32.0 38.0 25.0 40.0 15 34.68926212197706 36.0 32.0 39.0 27.0 40.0 16 34.604509610119955 36.0 32.0 39.0 27.0 40.0 17 33.95571451935179 36.0 32.0 38.0 26.0 40.0 18 34.309863261112255 36.0 32.0 39.0 27.0 40.0 19 34.08421446839172 36.0 32.0 39.0 27.0 40.0 20 33.523812571255206 35.0 31.0 39.0 25.0 40.0 21 33.66497668873356 36.0 32.0 39.0 25.0 40.0 22 34.72964619494239 37.0 33.0 39.0 27.0 40.0 23 35.0913062130984 37.0 33.0 39.0 27.0 40.0 24 35.39277884043337 37.0 34.0 39.0 29.0 40.0 25 33.706434478394115 36.0 32.0 39.0 24.0 40.0 26 34.525542843192326 36.0 33.0 39.0 27.0 40.0 27 34.7207696628814 37.0 33.0 39.0 27.0 40.0 28 34.770447429361056 37.0 33.0 39.0 27.0 40.0 29 35.226393046677046 37.0 34.0 40.0 27.0 40.0 30 33.70490093600601 36.0 32.0 39.0 24.0 40.0 31 34.13654452842979 36.0 32.0 39.0 25.0 40.0 32 34.46836802173032 37.0 33.0 39.0 26.0 40.0 33 34.81048307770343 37.0 33.0 39.0 26.0 40.0 34 35.10696635924712 38.0 34.0 40.0 26.0 40.0 35 35.0912754000365 38.0 34.0 40.0 26.0 41.0 36 34.985804659409006 38.0 34.0 40.0 26.0 41.0 37 35.42727761857696 38.0 35.0 40.0 29.0 41.0 38 34.91791400311449 37.0 34.0 40.0 27.0 41.0 39 35.00624794085788 37.0 34.0 40.0 27.0 40.0 40 34.364468747259416 37.0 33.0 40.0 25.0 40.0 41 33.878335810229466 36.0 32.0 39.0 24.0 40.0 42 34.76850620646174 37.0 33.0 40.0 27.0 40.0 43 34.9202297232276 37.0 34.0 40.0 27.0 40.0 44 35.708676721205784 38.0 35.0 40.0 30.0 41.0 45 35.88828368875015 38.0 35.0 40.0 30.0 41.0 46 35.616398711539965 38.0 35.0 40.0 30.0 41.0 47 35.04136535047488 37.0 34.0 40.0 27.0 41.0 48 35.30879191465256 38.0 35.0 40.0 29.0 41.0 49 35.670086916536896 38.0 35.0 40.0 30.0 41.0 50 35.25812575995677 38.0 34.0 40.0 28.0 41.0 51 35.049526071405715 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 2.0 11 1.0 12 13.0 13 13.0 14 2.0 15 33.0 16 83.0 17 290.0 18 715.0 19 1462.0 20 2184.0 21 2736.0 22 3153.0 23 3309.0 24 3504.0 25 4452.0 26 5882.0 27 7534.0 28 9969.0 29 13043.0 30 17862.0 31 24620.0 32 32226.0 33 41226.0 34 47630.0 35 54687.0 36 57069.0 37 52727.0 38 31837.0 39 3630.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.360145437652136 3.4911199125857135 37.211749731570826 13.93698491819132 2 15.184439877790656 34.86071310906165 33.630086821727474 16.32476019142022 3 13.50323181614557 34.79529460842524 36.15296552018374 15.548508055245449 4 14.795721250820696 2.9452546699565536 63.762417071384384 18.49660700783837 5 38.19753068862453 3.8144200389192675 35.742440726334976 22.24560854612123 6 16.379275608617228 28.99035077115613 39.820430956224115 14.80994266400252 7 56.724002664144734 1.4380218962358289 36.912863031199414 4.925112408420024 8 52.490287959914575 24.100791895690673 14.287068706017317 9.121851438377432 9 49.094925562753176 3.5318879637069536 13.989841170517114 33.38334530302276 10 42.84105911604436 17.243700506519332 22.29870182200005 17.616538555436254 11 35.42269595329688 16.981078409761576 28.199403174693472 19.39682246224807 12 23.702592326599493 14.152202304342982 30.751672793725515 31.39353257533201 13 26.147490276108737 18.233984911080615 41.912637858824034 13.705886953986617 14 19.846219118793833 29.789357168421827 26.84173226293497 23.522691449849372 15 11.142951275068205 20.430719200566962 46.03139613983441 22.39493338453042 16 14.888871507161666 24.025181382273956 24.885339856221513 36.20060725434286 17 16.989137210564614 27.379538704761092 34.239711400121834 21.391612684552463 18 15.239903389199785 22.825131133280713 33.23473153527266 28.70023394224684 19 15.684085527578876 26.54000127992719 28.072595573822174 29.703317618671765 20 17.682431103178722 26.600442285949953 41.25442345205843 14.462703158812893 21 18.57766906297479 34.25132555422032 29.558496227770153 17.612509155034736 22 14.935328123555639 19.428109571248093 37.94960405215466 27.686958253041606 23 17.489730954564955 31.583862488415477 31.055774012263598 19.870632544755974 24 20.503722454900345 24.652345703592566 25.367919810191538 29.476012031315552 25 14.403684294108304 37.848632018563684 22.29253920962126 25.45514447770675 26 15.519117134669672 20.546860741551885 32.27597126326443 31.65805086051401 27 21.516050049893458 26.001246743888938 27.127345644336675 25.355357561880925 28 13.216433316978707 25.472210173524946 34.1406355549551 27.170720954541256 29 19.85024851919535 17.91945465620919 28.17546379583739 34.05483302875807 30 18.016871336504707 27.94815820848118 35.36960267741806 18.66536777759606 31 26.25438789852548 18.271671656012458 22.71799648731094 32.75594395815112 32 23.59403553931154 28.376696792360256 22.917570318962596 25.11169734936561 33 18.919694049997748 17.029905261685855 29.989168023626505 34.06123266468989 34 22.376682570947075 20.9009739297794 23.824422432857155 32.897921066416366 35 15.095556045404232 25.520800001896188 31.410124224044147 27.97351972865544 36 22.1185639216969 20.049585327293972 28.997224454194015 28.834626296815113 37 15.011412684078419 19.679117513907357 37.53813116409378 27.77133863792045 38 26.381195499396775 20.71633258196867 27.464393136745997 25.438078781888557 39 19.013792400550845 19.49281700122541 26.78745386929099 34.70593672893275 40 16.541873765996126 23.958340740319365 35.467967451925695 24.03181804175881 41 18.296322105527626 22.520792891189597 27.97494186997362 31.207943133309158 42 17.674135278822657 23.68979305473585 34.79292437289494 23.84314729354656 43 20.469354039710925 17.513196286314972 32.28900755868111 29.728442115292996 44 20.500167101604884 16.21549233347318 35.00197914666781 28.282361418254133 45 20.075894941680357 16.41767342420816 28.229031118822277 35.2774005152892 46 27.932988701087226 22.26694066589397 26.43571091659378 23.36435971642502 47 12.623637410849517 18.45038741499743 47.55687972713849 21.36909544701457 48 20.3695671238851 23.99104999063757 25.77204496810848 29.867337917368847 49 18.969231972581117 17.61345724924686 39.39141832523898 24.025892452933046 50 22.13942199436358 16.38354203257178 32.88393667678757 28.593099296277067 51 19.191323041770662 16.78268969587508 27.805707053109867 36.22028020924439 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 74.0 1 195.0 2 316.0 3 1454.0 4 2592.0 5 1796.0 6 1000.0 7 1054.5 8 1109.0 9 1217.0 10 1325.0 11 1398.5 12 1472.0 13 1410.5 14 1349.0 15 1265.0 16 1181.0 17 1136.5 18 1092.0 19 1135.0 20 1178.0 21 1251.0 22 1324.0 23 1527.0 24 1730.0 25 1939.0 26 2550.0 27 2952.0 28 3219.5 29 3487.0 30 3866.0 31 4245.0 32 4844.5 33 5444.0 34 6151.0 35 6858.0 36 7153.5 37 7449.0 38 8197.0 39 8945.0 40 10158.5 41 11372.0 42 12636.0 43 13900.0 44 16949.5 45 19999.0 46 71388.0 47 122777.0 48 89133.0 49 55489.0 50 49727.5 51 43966.0 52 34469.5 53 24973.0 54 22428.5 55 19884.0 56 17928.0 57 15972.0 58 13965.5 59 11959.0 60 9966.0 61 7973.0 62 6868.0 63 5763.0 64 4846.5 65 3930.0 66 3354.0 67 2778.0 68 2191.0 69 1604.0 70 1234.0 71 864.0 72 773.0 73 682.0 74 556.5 75 312.5 76 194.0 77 145.0 78 96.0 79 53.5 80 11.0 81 10.0 82 9.0 83 5.0 84 1.0 85 1.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 421899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.932602580836797 #Duplication Level Percentage of deduplicated Percentage of total 1 75.08148307435192 22.473841940444007 2 9.907229762786319 5.930983423330417 3 3.739986470363358 3.3584258602527886 4 1.9525364162788512 2.3377798629234467 5 1.3277910354249067 1.987212068688576 6 1.0501270821436683 1.885982196550811 7 0.8475524682306912 1.775861583856961 8 0.7869650159258936 1.884472885338534 9 0.6380050058418281 1.7187435256003107 >10 4.500260872648493 21.617093292085972 >50 0.08761567564193921 1.7821522601219524 >100 0.06372049137595578 3.8504025419357233 >500 0.0031860245687977892 0.754106702176018 >1k 0.007965061421994473 5.427517886511872 >5k 0.0031860245687977892 6.548068471471495 >10k+ 0.002389518426598342 16.66735549871111 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGC 25964 6.154079530882984 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCG 24073 5.705867992102375 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTC 19872 4.7101320458213936 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGCTCATT 9284 2.2005266663348335 No Hit GAACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCT 6149 1.457457827584327 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTA 6148 1.4572208040312966 No Hit GCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 5884 1.394646586031254 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTC 4989 1.182510506068988 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCT 4195 0.9943138049627992 No Hit CCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 2450 0.5807077049246384 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGCTCATTCGT 2205 0.5226369344321745 No Hit CTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGCT 1931 0.45769248090182724 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATG 1866 0.442285949954847 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1592 0.3773414964244997 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTAT 1253 0.2969905119471722 No Hit TCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGC 1180 0.2796877925759483 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTT 1104 0.26167400254563294 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCTGCTCAT 926 0.21948381010621024 No Hit CGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTG 869 0.20597346758347376 No Hit TGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCCGTCTTCTGCTT 832 0.19720359612134655 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCTGCTCATTCG 536 0.12704462442432904 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGC 478 0.11329725834856211 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGC 460 0.10903083439401373 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGCTCATTCGTATGCC 452 0.10713464596977001 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3702355303046463E-4 0.0 0.0 0.5148151571821692 0.0 2 2.3702355303046463E-4 0.0 0.0 2.9319813509868475 0.0 3 2.3702355303046463E-4 0.0 0.0 3.6674654360403793 0.0 4 2.3702355303046463E-4 0.0 0.0 6.129192057814785 0.0 5 2.3702355303046463E-4 0.0 0.0 12.443736534099394 0.0 6 2.3702355303046463E-4 0.0 0.0 13.388038369372765 0.0 7 2.3702355303046463E-4 0.0 0.0 15.153626815896695 0.0 8 2.3702355303046463E-4 0.0 0.0 17.36932298962548 0.0 9 2.3702355303046463E-4 0.0 0.0 17.852139967148535 0.0 10 2.3702355303046463E-4 0.0 0.0 24.73151157030474 0.0 11 2.3702355303046463E-4 0.0 0.0 26.498759181699885 0.0 12 2.3702355303046463E-4 0.0 0.0 34.65995415964484 0.0 13 2.3702355303046463E-4 0.0 0.0 35.62345490271368 0.0 14 2.3702355303046463E-4 0.0 0.0 36.099161173645825 0.0 15 2.3702355303046463E-4 0.0 0.0 38.031377177950176 0.0 16 2.3702355303046463E-4 0.0 0.0 39.06740712824634 0.0 17 2.3702355303046463E-4 0.0 0.0 39.90670752952721 0.0 18 2.3702355303046463E-4 0.0 0.0 40.63342174311861 0.0 19 2.3702355303046463E-4 0.0 0.0 43.70903936724192 0.0 20 2.3702355303046463E-4 0.0 0.0 44.55213214537129 0.0 21 2.3702355303046463E-4 0.0 0.0 45.31274072704605 0.0 22 2.3702355303046463E-4 0.0 0.0 46.195416438531495 0.0 23 2.3702355303046463E-4 0.0 0.0 46.87282975309257 0.0 24 2.3702355303046463E-4 0.0 0.0 47.38669681606261 0.0 25 2.3702355303046463E-4 0.0 0.0 47.84438929696444 0.0 26 2.3702355303046463E-4 0.0 0.0 48.338109357926896 0.0 27 2.3702355303046463E-4 0.0 0.0 48.88444864766212 0.0 28 2.3702355303046463E-4 0.0 0.0 49.32957888025333 0.0 29 2.3702355303046463E-4 0.0 0.0 49.83799440150368 0.0 30 2.3702355303046463E-4 0.0 0.0 50.35328360579191 0.0 31 2.3702355303046463E-4 0.0 0.0 50.81524251064828 0.0 32 4.7404710606092925E-4 0.0 0.0 51.26961666180768 0.0 33 4.7404710606092925E-4 0.0 0.0 51.67943038499736 0.0 34 4.7404710606092925E-4 0.0 0.0 52.18429055295225 0.0 35 4.7404710606092925E-4 0.0 0.0 52.623258173164665 0.0 36 4.7404710606092925E-4 0.0 0.0 53.06530709956648 0.0 37 4.7404710606092925E-4 0.0 0.0 53.506170908203146 0.0 38 4.7404710606092925E-4 0.0 0.0 54.020037971173196 0.0 39 4.7404710606092925E-4 0.0 0.0 55.0003673865072 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 115 0.0 45.000004 1 ATCCGTC 35 1.2094824E-7 45.000004 6 GCGATAC 35 1.2094824E-7 45.000004 33 GTACGGG 30 2.1622218E-6 45.000004 3 CGGGTAT 20 7.028205E-4 45.0 6 CGCGGGC 90 0.0 45.0 4 CCGATCG 25 3.886594E-5 45.0 40 CCGATCA 20 7.028205E-4 45.0 40 GCGAACA 20 7.028205E-4 45.0 33 GGGTACG 40 6.7975634E-9 45.0 7 CTCCCGG 20 7.028205E-4 45.0 2 CGATTGT 40 6.7975634E-9 45.0 10 CCTCGAA 25 3.886594E-5 45.0 42 TGTTGCG 20 7.028205E-4 45.0 1 TTGCGCG 20 7.028205E-4 45.0 1 GAGCATT 20 7.028205E-4 45.0 34 TCCCCCG 20 7.028205E-4 45.0 1 GGCGACG 20 7.028205E-4 45.0 32 GGCGAAC 20 7.028205E-4 45.0 32 CGATCGA 25 3.886594E-5 45.0 41 >>END_MODULE