##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933831.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1081575 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.884756951667708 30.0 16.0 33.0 16.0 34.0 2 26.782706700876037 31.0 16.0 33.0 16.0 34.0 3 27.79921041074359 31.0 25.0 33.0 16.0 34.0 4 31.718572452210896 35.0 28.0 35.0 19.0 37.0 5 33.448643875829234 35.0 33.0 37.0 28.0 37.0 6 32.2179118415274 35.0 32.0 37.0 17.0 37.0 7 33.23716986801655 35.0 32.0 35.0 28.0 37.0 8 32.60298083812958 35.0 32.0 37.0 25.0 37.0 9 34.4082167209856 35.0 32.0 39.0 28.0 39.0 10 33.42840672167903 35.0 31.0 37.0 27.0 39.0 11 34.0413998104616 35.0 32.0 39.0 27.0 39.0 12 34.185961213970366 35.0 32.0 39.0 27.0 39.0 13 34.43479925109216 35.0 33.0 39.0 27.0 39.0 14 34.51511545662576 37.0 32.0 39.0 25.0 40.0 15 34.98208630931743 37.0 33.0 39.0 27.0 40.0 16 34.85082310519381 36.0 32.0 39.0 27.0 40.0 17 34.23346601021658 36.0 32.0 38.0 27.0 40.0 18 34.58547118785105 36.0 32.0 39.0 27.0 40.0 19 34.300824260915796 36.0 32.0 39.0 27.0 40.0 20 34.08172341261586 36.0 32.0 39.0 25.0 40.0 21 33.90511522548136 36.0 32.0 39.0 25.0 40.0 22 34.829324827219565 37.0 33.0 39.0 27.0 40.0 23 35.428267110463906 37.0 34.0 39.0 29.0 40.0 24 35.72742250884127 37.0 34.0 39.0 30.0 40.0 25 33.86721124286342 36.0 32.0 39.0 24.0 40.0 26 34.486582067817764 36.0 32.0 39.0 27.0 40.0 27 34.944081547742876 37.0 33.0 39.0 27.0 40.0 28 35.1184198969096 37.0 34.0 39.0 27.0 40.0 29 35.606183574879225 38.0 34.0 40.0 29.0 40.0 30 33.81452234010587 36.0 32.0 39.0 24.0 40.0 31 34.64900261193167 37.0 33.0 39.0 26.0 40.0 32 34.79950627557035 37.0 33.0 39.0 27.0 40.0 33 35.220405427270414 38.0 34.0 39.0 27.0 40.0 34 35.16625199362041 38.0 34.0 40.0 27.0 41.0 35 35.34374500150244 38.0 34.0 40.0 27.0 41.0 36 35.03294085014909 38.0 34.0 40.0 25.0 41.0 37 35.23582738136514 38.0 34.0 40.0 27.0 41.0 38 35.16015347987888 38.0 34.0 40.0 28.0 41.0 39 34.83821556526362 37.0 34.0 40.0 26.0 41.0 40 34.68451748607355 37.0 33.0 40.0 25.0 41.0 41 34.018249312345425 37.0 33.0 39.0 24.0 40.0 42 34.77208977648337 37.0 33.0 40.0 26.0 41.0 43 34.88859672237247 38.0 34.0 40.0 26.0 40.0 44 35.45236899891362 38.0 35.0 40.0 29.0 41.0 45 35.7895596699258 38.0 35.0 40.0 30.0 41.0 46 35.51264036243441 38.0 35.0 40.0 29.0 41.0 47 35.023217992279776 38.0 34.0 40.0 26.0 41.0 48 35.26158888657744 38.0 34.0 40.0 28.0 41.0 49 35.59601691976978 38.0 35.0 40.0 29.0 41.0 50 35.25717495319326 38.0 34.0 40.0 27.0 41.0 51 34.57257980260269 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 12.0 11 13.0 12 24.0 13 24.0 14 54.0 15 91.0 16 258.0 17 913.0 18 1986.0 19 3369.0 20 4724.0 21 6077.0 22 7185.0 23 7833.0 24 9190.0 25 12248.0 26 15808.0 27 19403.0 28 23969.0 29 31193.0 30 41451.0 31 56159.0 32 74963.0 33 95182.0 34 112086.0 35 137430.0 36 156542.0 37 155601.0 38 96891.0 39 10890.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.35910593347664 3.1983912350045074 41.488662367380904 14.953840464137947 2 18.476665973233477 26.804613642142243 38.13521947160391 16.583500913020362 3 14.953470633104502 26.794535746480825 42.06541386404087 16.186579756373806 4 15.007003675195897 3.0495342440422535 62.59029655825995 19.353165522501907 5 32.49575850033516 3.8631625176247604 41.68384069528234 21.95723828675774 6 16.530337701962416 22.737766682846775 45.49504195270785 15.236853662482952 7 63.35168619836812 1.2872893696692322 31.002658160552897 4.35836627140975 8 60.847097982109425 18.30682107112313 13.850542033608395 6.995538913159051 9 57.36365947807596 3.2311212814645307 13.540531169821787 25.864688070637726 10 41.425606176178256 18.685712964889166 22.72112428634168 17.167556572590897 11 32.48734484432425 19.353165522501907 28.945288121489494 19.214201511684347 12 23.674363775050274 16.099114716963687 31.84004807803435 28.386473429951693 13 25.209994683678893 18.18727318956152 40.8298083812958 15.77292374546379 14 20.0626863601692 27.137646487760904 29.64731988072949 23.152347271340407 15 13.844439821556525 21.25132330166655 43.17083882301274 21.733398053764187 16 17.222846312091164 23.83403832374084 26.822550447264405 32.12056491690359 17 18.022790837436144 26.85602015579132 34.15371102327624 20.96747798349629 18 17.252062963733444 23.280216351154568 33.37660356424659 26.091117120865405 19 16.929108013776208 26.84520259806301 29.256131105101357 26.969558283059424 20 19.255437671913644 26.28019323671498 38.86517347386913 15.599195617502254 21 20.510274368397937 31.943323394124313 30.54221852391189 17.004183713565865 22 16.826017613202968 19.767561195478816 37.11272912188244 26.293692069435775 23 18.585303839308416 29.164875297598407 32.004253056884636 20.245567806208538 24 20.64507778008922 23.694519566373113 28.268035041490418 27.39236761204725 25 16.208399787347155 34.816263319695814 25.435961445114764 23.539375447842268 26 16.863000716547628 21.40951852622333 34.57235975313778 27.155121004091253 27 21.376973395280032 25.353766497931257 29.708989205556712 23.560270901232 28 15.211150405658413 24.777015001271295 36.31047315257842 23.701361440491876 29 20.07637010840672 19.4729907773386 35.788826479902 24.661812634352682 30 18.40889443635439 26.63587823313224 35.52809560132214 19.427131729191228 31 25.566049511129602 20.977555879157713 28.21995700714236 25.236437602570327 32 25.114300903774588 26.222499595497307 30.185886323186097 18.47731317754201 33 21.47784480965259 19.859926496082103 25.473314379492866 33.18891431477244 34 23.802047939347712 24.54226475279107 31.642188475140422 20.0134988327208 35 22.921110417677923 20.9679402722881 31.931211427778933 24.179737882255044 36 27.63053879758685 22.44412084229018 29.576589695582832 20.348750664540137 37 18.805075930934052 21.450939601969353 41.16644707949056 18.57753738760604 38 27.532348658206786 20.534590758847052 24.27829785266856 27.654762730277604 39 21.681621709081664 26.115895800106326 32.18602500982364 20.01645748098837 40 23.588562975290664 20.300302799158633 29.376973395280032 26.73416083027067 41 25.329265191965423 28.266278344081545 24.041883364537828 22.362573099415204 42 25.518803596606798 19.06395765434667 34.48850056630377 20.92873818274276 43 27.588193144257218 19.078288606892727 28.29854610174976 25.034972147100294 44 21.965282111735203 19.494348519520145 33.49485703719113 25.04551233155352 45 21.906109146383745 17.213877909530083 29.41293946328271 31.46707348080346 46 27.9551579871946 22.725839632018122 29.051799459122112 20.267202921665163 47 15.71060721632804 19.805468876407094 42.21445577051984 22.269468136745026 48 21.39047222800083 25.99597808751127 27.54177934955967 25.071770334928228 49 22.32975059519682 17.429119570996 37.55939255252756 22.681737281279617 50 24.823243880452118 18.118946906132262 30.53260291704228 26.525206296373344 51 20.54115525969073 18.44476804659871 28.64831380163188 32.36576289207868 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 113.0 1 393.5 2 674.0 3 6506.0 4 12338.0 5 8416.0 6 4494.0 7 4366.5 8 4239.0 9 4311.0 10 4383.0 11 4410.0 12 4437.0 13 4225.0 14 4013.0 15 3860.5 16 3708.0 17 3530.0 18 3352.0 19 3518.0 20 3684.0 21 3703.0 22 3722.0 23 4129.0 24 4536.0 25 5137.5 26 6705.5 27 7672.0 28 8941.5 29 10211.0 30 11854.0 31 13497.0 32 15598.5 33 17700.0 34 19771.0 35 21842.0 36 23950.0 37 26058.0 38 28635.5 39 31213.0 40 34015.5 41 36818.0 42 40391.0 43 43964.0 44 51188.0 45 58412.0 46 159996.5 47 261581.0 48 195541.5 49 129502.0 50 117337.5 51 105173.0 52 84223.5 53 63274.0 54 56192.5 55 49111.0 56 44183.5 57 39256.0 58 35866.0 59 32476.0 60 27862.0 61 23248.0 62 20209.5 63 17171.0 64 14719.0 65 12267.0 66 10316.5 67 8366.0 68 6798.5 69 5231.0 70 4328.5 71 3426.0 72 2757.0 73 2088.0 74 1664.0 75 933.5 76 627.0 77 498.0 78 369.0 79 284.0 80 199.0 81 153.0 82 107.0 83 59.5 84 12.0 85 12.5 86 13.0 87 12.0 88 11.0 89 8.5 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1081575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.861705273949475 #Duplication Level Percentage of deduplicated Percentage of total 1 76.06491014088246 24.996226587391302 2 9.546746121051292 6.27444714710416 3 3.3891198581789213 3.341167737526955 4 1.8043067267994877 2.3717038351955697 5 1.249824847899725 2.053568789786975 6 0.9505864767013582 1.8742735580857244 7 0.7782253660821582 1.7901668831832325 8 0.7207058807010673 1.8946899392640535 9 0.6540719694247058 1.934452825846774 >10 4.712921770944798 24.583078708981006 >50 0.07156061817469482 1.636752625452166 >100 0.04447577406462481 2.791372699942481 >500 0.005987123431574361 1.3999960480121036 >1k 0.003706314505260319 3.1012962043295627 >5k 8.553033473677659E-4 2.278143873617233 >10k+ 0.0019957078105247873 17.678662536280793 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGC 50344 4.654693386958833 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCG 47214 4.365300603286873 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTC 39513 3.653283406143818 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGTCAGGT 17233 1.5933245498462891 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 12765 1.1802232854864434 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTA 11019 1.0187920393870051 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCT 10607 0.9806994429420058 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTC 9033 0.8351709312807711 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCT 7828 0.7237593324549847 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7455 0.6892725885860898 No Hit CCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 4009 0.37066315327184896 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGCT 3967 0.3667799274206597 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGT 3504 0.3239719852992164 No Hit GAATGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTT 3297 0.30483322931835516 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATG 3189 0.29484779141529716 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTG 2644 0.2444583131081987 No Hit TCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGC 2393 0.22125141575942495 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTAT 2393 0.22125141575942495 No Hit TGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCCGTCTTCTGCTT 2076 0.19194230635878234 Illumina Single End Adapter 1 (95% over 23bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTTGTCAGG 2037 0.18833645378267802 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGCC 1443 0.1334165453158588 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCTTGTCAGGTCGTATGC 1132 0.10466218246538612 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4269699281140929 0.0 2 0.0 0.0 0.0 2.3100570926657884 0.0 3 0.0 0.0 0.0 2.909090909090909 0.0 4 0.0 0.0 0.0 4.565379192381481 0.0 5 0.0 0.0 0.0 9.47054064674202 0.0 6 0.0 0.0 0.0 10.498763377481913 0.0 7 0.0 0.0 0.0 11.950257726001434 0.0 8 0.0 0.0 0.0 13.691976978018168 0.0 9 0.0 0.0 0.0 14.164898412038 0.0 10 0.0 0.0 0.0 19.605945033862653 0.0 11 0.0 0.0 0.0 21.167094283799088 0.0 12 0.0 0.0 0.0 27.444883618796663 0.0 13 0.0 0.0 0.0 28.201188082194946 0.0 14 0.0 0.0 0.0 28.607077641402583 0.0 15 0.0 0.0 0.0 29.97425051429628 0.0 16 0.0 0.0 0.0 30.784735224094494 0.0 17 0.0 0.0 0.0 31.57423202274461 0.0 18 0.0 0.0 0.0 32.30880891292791 0.0 19 0.0 0.0 0.0 34.673970829577236 0.0 20 0.0 0.0 0.0 35.461433557543394 0.0 21 9.245775836164852E-5 0.0 0.0 36.28486235351224 0.0 22 9.245775836164852E-5 0.0 0.0 37.2251577560502 0.0 23 9.245775836164852E-5 0.0 0.0 38.10822180616231 0.0 24 9.245775836164852E-5 0.0 0.0 38.78464276633613 0.0 25 9.245775836164852E-5 0.0 0.0 39.3717495319326 0.0 26 9.245775836164852E-5 0.0 0.0 39.90865173473869 0.0 27 9.245775836164852E-5 0.0 0.0 40.5091648752976 0.0 28 9.245775836164852E-5 0.0 0.0 41.05799412893234 0.0 29 9.245775836164852E-5 0.0 0.0 41.64214224626124 0.0 30 9.245775836164852E-5 0.0 0.0 42.298684788387305 0.0 31 9.245775836164852E-5 0.0 0.0 42.864618727318955 0.0 32 9.245775836164852E-5 0.0 0.0 43.37248919399949 0.0 33 9.245775836164852E-5 0.0 0.0 43.894783070984445 0.0 34 9.245775836164852E-5 0.0 0.0 44.42992857638166 0.0 35 9.245775836164852E-5 0.0 0.0 45.00399879804914 0.0 36 9.245775836164852E-5 0.0 0.0 45.53137785174398 0.0 37 9.245775836164852E-5 0.0 0.0 46.063564708873635 0.0 38 9.245775836164852E-5 0.0 0.0 46.649561981369764 0.0 39 9.245775836164852E-5 0.0 0.0 47.53835841250029 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGACG 20 7.0331007E-4 45.000004 7 ACGACCG 20 7.0331007E-4 45.000004 36 TATTGCG 25 3.890653E-5 45.0 1 TGATACC 5300 0.0 43.81132 4 CGTTTTT 4730 0.0 43.668076 1 TACGGCT 5740 0.0 43.667248 7 GATACCT 5355 0.0 43.57143 5 ACGGCTG 5785 0.0 43.327568 8 CGGCTGT 6020 0.0 42.533226 9 GCGACTG 1180 0.0 42.521187 11 CCGATGA 1580 0.0 41.86709 18 GGCGACT 1205 0.0 41.825726 10 ACCACCT 2190 0.0 41.712326 14 CGATGAA 1585 0.0 41.025234 19 ATGATAC 19340 0.0 40.904858 3 AATGATA 19295 0.0 40.732056 2 CATACGA 210 0.0 40.714283 18 GAATCTG 4920 0.0 40.609756 1 GCGATAC 50 1.0822987E-9 40.5 33 TCAAGCG 50 1.0822987E-9 40.5 17 >>END_MODULE