##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933827.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 727103 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.43849220811907 30.0 16.0 31.0 16.0 34.0 2 26.422930451394095 30.0 16.0 33.0 16.0 34.0 3 27.417591455405905 31.0 25.0 33.0 16.0 34.0 4 31.47985636147836 35.0 28.0 35.0 19.0 37.0 5 33.3428358843245 35.0 32.0 35.0 28.0 37.0 6 31.90055741758733 35.0 31.0 37.0 17.0 37.0 7 33.1653630916115 35.0 32.0 35.0 28.0 37.0 8 32.2790127395981 35.0 32.0 37.0 17.0 37.0 9 34.25775715407583 35.0 32.0 39.0 28.0 39.0 10 33.42295658249244 35.0 32.0 37.0 27.0 39.0 11 33.9941108756256 35.0 32.0 39.0 27.0 39.0 12 34.17104866848301 35.0 32.0 39.0 27.0 39.0 13 34.38753381570424 35.0 33.0 38.0 27.0 39.0 14 34.41581866668134 37.0 32.0 39.0 25.0 40.0 15 34.86343888004863 37.0 32.0 39.0 27.0 40.0 16 34.50207192103457 36.0 32.0 39.0 27.0 40.0 17 34.096029035776226 36.0 32.0 38.0 27.0 40.0 18 34.41456574928174 36.0 32.0 39.0 27.0 40.0 19 34.05726148839985 36.0 32.0 39.0 26.0 40.0 20 34.16862672826271 36.0 32.0 39.0 26.0 40.0 21 34.03926541356589 36.0 32.0 39.0 25.0 40.0 22 35.10084953576041 37.0 33.0 39.0 27.0 40.0 23 35.67102597568707 37.0 34.0 39.0 30.0 40.0 24 35.938448885508656 38.0 34.0 40.0 30.0 40.0 25 34.00228028216085 36.0 32.0 39.0 24.0 40.0 26 34.77051944497547 37.0 33.0 39.0 27.0 40.0 27 35.13447613336763 37.0 33.0 39.0 28.0 40.0 28 35.33721082157548 37.0 34.0 39.0 28.0 40.0 29 35.80337861348392 38.0 34.0 40.0 30.0 40.0 30 34.059599534041254 37.0 32.0 39.0 24.0 40.0 31 34.763347146140234 37.0 33.0 39.0 26.0 40.0 32 34.718397531023804 37.0 33.0 39.0 27.0 40.0 33 35.4858197531849 38.0 34.0 39.0 29.0 40.0 34 35.63374515027444 38.0 34.0 40.0 30.0 40.0 35 35.83119998129563 38.0 35.0 40.0 30.0 41.0 36 35.773442002027224 38.0 35.0 40.0 29.0 41.0 37 36.09707978099389 38.0 35.0 40.0 30.0 41.0 38 35.729453736265704 38.0 35.0 40.0 30.0 41.0 39 35.49334000822442 38.0 34.0 40.0 29.0 41.0 40 35.26458562266969 37.0 34.0 40.0 28.0 41.0 41 34.60443843581996 37.0 33.0 40.0 26.0 40.0 42 35.5145873418209 38.0 34.0 40.0 30.0 41.0 43 35.608452997718345 38.0 35.0 40.0 30.0 40.0 44 36.139237494550294 38.0 35.0 40.0 31.0 41.0 45 36.358599813231415 38.0 35.0 40.0 31.0 41.0 46 36.12726807618728 38.0 35.0 40.0 31.0 41.0 47 35.660031659888624 38.0 35.0 40.0 30.0 41.0 48 35.87252700098885 38.0 35.0 40.0 30.0 41.0 49 36.202078660107304 38.0 35.0 40.0 31.0 41.0 50 35.90725248004753 38.0 35.0 40.0 30.0 41.0 51 35.28891642587089 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 7.0 11 14.0 12 17.0 13 20.0 14 27.0 15 46.0 16 144.0 17 350.0 18 827.0 19 1646.0 20 2496.0 21 3178.0 22 3638.0 23 4208.0 24 4591.0 25 5873.0 26 7955.0 27 10831.0 28 14503.0 29 20050.0 30 27199.0 31 37596.0 32 51675.0 33 67028.0 34 81624.0 35 99634.0 36 111961.0 37 103580.0 38 59962.0 39 6416.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.27062328170837 3.5201340112748816 38.94853961543275 14.260703091583999 2 15.729133286480732 29.37135453986574 37.50954128919837 17.38997088445516 3 15.70217699555634 29.167807036967254 38.66233532250589 16.46768064497052 4 15.843697522909409 3.393466950349538 61.06356320906392 19.69927231767714 5 34.97248670408457 3.8540619417056456 38.14658996043202 23.02686139377777 6 17.650456675326602 24.5992658536686 41.06405832461151 16.686219146393288 7 60.87390644791728 1.56800343280113 32.22528307543773 5.332807043843857 8 57.00650389284599 19.8674740717615 13.427533650665724 9.698488384726787 9 53.12851136634011 4.1534693159015985 14.078197999458123 28.639821318300157 10 41.15029094915026 20.506723256539992 21.199334894781067 17.14365089952868 11 33.531287864305334 18.84918642888284 27.208249725279636 20.41127598153219 12 24.086683729815444 15.508256739416563 30.71861895769925 29.68644057306874 13 24.218164414120142 19.672866155138955 39.8099031361444 16.2990662945965 14 20.28378372802753 28.151444843440338 26.421016004610077 25.14375542392206 15 12.785121227666508 22.099619998817225 43.011512811802454 22.103745961713813 16 15.88770779380638 24.22462842265814 24.41112194558405 35.47654183795143 17 16.951105964354433 27.74778814005718 32.72645003527698 22.5746558603114 18 16.226861943906158 23.65882137743896 32.2239077544722 27.89040892418268 19 16.180926223657448 26.44948514859655 28.285951233869206 29.083637393876792 20 18.946971749532047 26.19725128351829 39.11949201144817 15.736284955501489 21 21.47549934465956 32.62577654060016 27.90044876723105 17.998275347509225 22 16.99002754767894 20.670111387245 34.48782359583168 27.852037469244383 23 18.635186486646322 30.235743766701557 29.673512555992755 21.45555719065937 24 22.212671382183817 22.48993608883473 25.436561257483465 29.860831271497982 25 15.592838978796678 35.38013183826775 22.44633841422742 26.58069076870815 26 16.39286318444567 20.912580473467994 32.59084338807569 30.103712954010643 27 21.210474994601867 26.62813934201894 24.644651445531103 27.51673421784809 28 12.726119958245254 24.95657424051338 37.40089093292147 24.916414868319894 29 20.15642900661942 20.915743711688712 30.563207688594325 28.36461959309754 30 20.50741091702276 26.315391354457347 29.414539618183394 23.7626581103365 31 25.31965897541339 21.176091970463606 27.149661052148044 26.35458800197496 32 27.337667428136044 32.12103374625053 21.849586647283807 18.691712178329617 33 25.60545067205059 20.904878676061024 21.614406762178124 31.875263889710258 34 29.903328689332874 20.92454576586811 29.84020145701503 19.331924087783985 35 23.84338945101313 23.100853661723306 22.78824320625826 30.267513681005305 36 21.56076924452244 25.494737334325396 32.59978297435164 20.34471044680052 37 19.02742802601557 25.12766416862535 30.215389016411702 25.62951878894737 38 26.70584497657141 23.07939865466103 27.152274161982554 23.06248220678501 39 27.092172635788874 29.295436822568465 25.76870127065904 17.843689270983614 40 32.904691632409715 19.07308868207118 26.294073879491624 21.72814580602748 41 26.96330506131869 26.95587832810482 22.119287088624308 23.961529521952187 42 26.462688229865645 19.357642589839404 31.846107085241016 22.33356209505393 43 23.976520520476466 25.47768335435282 25.361606264862065 25.18418986030865 44 22.987664746260158 18.17802979770404 30.741036689437394 28.093268766598406 45 20.788939118666818 15.769842787060432 29.806506093359538 33.63471200091321 46 29.46212572359074 25.140179589411677 25.662939088409757 19.73475559858782 47 17.16276786094955 18.698451251060717 42.576086194115554 21.56269469387418 48 23.845589964557977 23.84022621279241 25.705298974148093 26.608884848501518 49 23.33273277651172 16.04243140242854 38.1709331415219 22.453902679537837 50 25.544523953277597 18.59887801315632 29.147039690387743 26.70955834317834 51 21.416910671527965 16.75567285515257 26.63872931345353 35.188687159865935 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 106.0 1 286.5 2 467.0 3 1821.0 4 3175.0 5 2225.5 6 1276.0 7 1400.5 8 1525.0 9 1633.0 10 1741.0 11 1851.5 12 1962.0 13 1837.5 14 1713.0 15 1620.5 16 1528.0 17 1501.0 18 1474.0 19 1457.0 20 1440.0 21 1641.5 22 1843.0 23 2081.5 24 2320.0 25 2686.5 26 3448.5 27 3844.0 28 4341.0 29 4838.0 30 5628.0 31 6418.0 32 7800.5 33 9183.0 34 10980.0 35 12777.0 36 13322.5 37 13868.0 38 15050.0 39 16232.0 40 17806.0 41 19380.0 42 21896.0 43 24412.0 44 29354.0 45 34296.0 46 113446.0 47 192596.0 48 144185.5 49 95775.0 50 88748.0 51 81721.0 52 63688.5 53 45656.0 54 39690.5 55 33725.0 56 30409.5 57 27094.0 58 24679.0 59 22264.0 60 20282.0 61 18300.0 62 15900.5 63 13501.0 64 11731.0 65 9961.0 66 8318.5 67 6676.0 68 5442.0 69 4208.0 70 3628.5 71 3049.0 72 2336.0 73 1623.0 74 1355.0 75 791.5 76 496.0 77 403.0 78 310.0 79 210.0 80 110.0 81 83.5 82 57.0 83 33.5 84 10.0 85 11.5 86 13.0 87 6.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 727103.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.53491170896023 #Duplication Level Percentage of deduplicated Percentage of total 1 72.42763733940392 19.218609620896743 2 11.369232411331623 6.033631564666673 3 4.208791100895401 3.3503970079115097 4 2.179643233728095 2.313465630560303 5 1.2687933303180672 1.6833659498453766 6 0.8826716187344607 1.4052968082674355 7 0.6481322646772392 1.2038692693257291 8 0.5698400421346921 1.2096524165019387 9 0.4871034974820341 1.1632723468930355 >10 5.769900297356251 29.392496068555285 >50 0.10201520559783371 1.8578985548857667 >100 0.06888655635729184 3.6453323129092166 >500 0.006836070478204532 1.1542273260243077 >1k 0.005258515752465025 3.3408685767649895 >5k 0.0026292578762325126 5.230580940926885 >10k+ 0.0026292578762325126 17.79703560506484 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGC 40462 5.564823690728824 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCG 33830 4.652710826389109 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTC 29236 4.020888374824475 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCTAGGGAT 12169 1.6736280829538592 No Hit GCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 11849 1.6296178120568887 No Hit GAACTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCT 9024 1.2410896392945703 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCTAGGGATCGTA 8536 1.1739739761766903 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTC 8148 1.1206115227141136 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCT 6364 0.8752542624635025 No Hit CCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 5414 0.744598770738121 No Hit CTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGCT 4875 0.6704689706960362 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCTAGGGATCGT 2929 0.4028315108038338 No Hit TCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 2919 0.40145618983830356 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATG 2748 0.37793820132773487 No Hit TGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGCTT 2269 0.312060327078832 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTAT 1777 0.24439453557473975 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1746 0.24013104058159573 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTT 1698 0.23352949994705016 No Hit CGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTG 1521 0.2091863188571633 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCTAGGGA 1461 0.20093439306398134 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGC 990 0.13615677558750275 No Hit TCCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTG 767 0.10548711805617636 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3753209655303306E-4 0.0 0.0 0.7542260174968334 0.0 2 1.3753209655303306E-4 0.0 0.0 3.723406449980264 0.0 3 1.3753209655303306E-4 0.0 0.0 4.5349833517397125 0.0 4 1.3753209655303306E-4 0.0 0.0 6.838783501099569 0.0 5 1.3753209655303306E-4 0.0 0.0 12.558743396740214 0.0 6 1.3753209655303306E-4 0.0 0.0 13.545811253701332 0.0 7 1.3753209655303306E-4 0.0 0.0 15.224940620517314 0.0 8 1.3753209655303306E-4 0.0 0.0 17.476341041090464 0.0 9 2.750641931060661E-4 0.0 0.0 17.942987444694907 0.0 10 2.750641931060661E-4 0.0 0.0 23.78493830997809 0.0 11 2.750641931060661E-4 0.0 0.0 25.573955821939947 0.0 12 2.750641931060661E-4 0.0 0.0 33.184844513088244 0.0 13 2.750641931060661E-4 0.0 0.0 34.10465917483493 0.0 14 2.750641931060661E-4 0.0 0.0 34.54476188380463 0.0 15 2.750641931060661E-4 0.0 0.0 36.135183048343904 0.0 16 2.750641931060661E-4 0.0 0.0 37.10285887969105 0.0 17 2.750641931060661E-4 0.0 0.0 37.972749390388984 0.0 18 2.750641931060661E-4 0.0 0.0 38.736465122547976 0.0 19 2.750641931060661E-4 0.0 0.0 41.27351970766178 0.0 20 2.750641931060661E-4 0.0 0.0 42.174492472180695 0.0 21 2.750641931060661E-4 0.0 0.0 42.993221042960904 0.0 22 2.750641931060661E-4 0.0 0.0 43.95635831512179 0.0 23 2.750641931060661E-4 0.0 0.0 44.72131183614976 0.0 24 2.750641931060661E-4 0.0 0.0 45.33690550032114 0.0 25 2.750641931060661E-4 0.0 0.0 45.87190535591244 0.0 26 2.750641931060661E-4 0.0 0.0 46.42162114583491 0.0 27 2.750641931060661E-4 0.0 0.0 47.003656978447346 0.0 28 2.750641931060661E-4 0.0 0.0 47.484744252189856 0.0 29 2.750641931060661E-4 0.0 0.0 48.02208215342255 0.0 30 2.750641931060661E-4 0.0 0.0 48.651291495152684 0.0 31 2.750641931060661E-4 0.0 0.0 49.16648672884034 0.0 32 2.750641931060661E-4 0.0 0.0 49.63725909534138 0.0 33 2.750641931060661E-4 0.0 0.0 50.11078210377347 0.0 34 2.750641931060661E-4 0.0 0.0 50.62556474117147 0.0 35 2.750641931060661E-4 0.0 0.0 51.15602603757652 0.0 36 2.750641931060661E-4 0.0 0.0 51.628861385525845 0.0 37 2.750641931060661E-4 0.0 0.0 52.10293452234415 0.0 38 2.750641931060661E-4 0.0 0.0 52.63972229519064 0.0 39 2.750641931060661E-4 0.0 0.0 53.42956912569471 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 35 1.2111013E-7 45.000004 2 CACCGTT 25 3.8893857E-5 45.000004 16 ATCGGAA 25 3.8893857E-5 45.000004 23 CGGGTAT 40 6.8084773E-9 45.0 6 TCGTTCG 20 7.031575E-4 45.0 1 ACGTTTA 20 7.031575E-4 45.0 23 GCAACTA 20 7.031575E-4 45.0 9 TTCACGC 20 7.031575E-4 45.0 43 TTTCACG 20 7.031575E-4 45.0 1 TGCGCCG 20 7.031575E-4 45.0 1 CTACGAT 20 7.031575E-4 45.0 14 CACACCG 20 7.031575E-4 45.0 17 GCATATC 75 0.0 45.0 28 CCGATCG 55 1.8189894E-12 44.999996 40 CGATCGA 60 0.0 44.999996 41 TACGGCT 4530 0.0 43.956955 7 GATACCT 3705 0.0 43.42105 5 ACGGCTG 4620 0.0 43.149353 8 TGATACC 3735 0.0 43.012047 4 CGGCTGT 4785 0.0 42.695927 9 >>END_MODULE