##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933825.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 936138 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.898790562929825 30.0 16.0 33.0 16.0 34.0 2 26.98126878729418 31.0 23.0 33.0 16.0 34.0 3 28.01958365112836 31.0 25.0 34.0 16.0 34.0 4 31.88809983143511 35.0 28.0 35.0 19.0 37.0 5 33.500082252830246 35.0 33.0 37.0 28.0 37.0 6 32.19420854617589 35.0 32.0 37.0 17.0 37.0 7 33.195397473449425 35.0 32.0 35.0 28.0 37.0 8 32.704442080120664 35.0 32.0 37.0 25.0 37.0 9 34.35366260102677 35.0 32.0 39.0 28.0 39.0 10 33.29779049670027 35.0 31.0 37.0 27.0 39.0 11 33.81728548568694 35.0 32.0 39.0 27.0 39.0 12 34.08916420442285 35.0 32.0 39.0 27.0 39.0 13 34.278962076104165 35.0 33.0 38.0 27.0 39.0 14 34.38963058865253 37.0 32.0 39.0 25.0 40.0 15 34.795048379619246 37.0 32.0 39.0 27.0 40.0 16 34.68536155994095 36.0 32.0 39.0 27.0 40.0 17 34.15963351557142 36.0 32.0 38.0 27.0 40.0 18 34.432825074935536 36.0 32.0 39.0 27.0 40.0 19 34.224903806917354 36.0 32.0 39.0 27.0 40.0 20 34.27567303111294 36.0 32.0 39.0 26.0 40.0 21 34.01087339687098 36.0 32.0 39.0 25.0 40.0 22 34.992978599309076 37.0 33.0 39.0 27.0 40.0 23 35.59685644637863 37.0 34.0 39.0 29.0 40.0 24 35.88946394655489 38.0 34.0 40.0 30.0 40.0 25 33.8806276425057 36.0 32.0 39.0 24.0 40.0 26 34.65107922122593 37.0 33.0 39.0 27.0 40.0 27 35.00722543043867 37.0 33.0 39.0 27.0 40.0 28 35.262558511672424 37.0 34.0 39.0 27.0 40.0 29 35.813105546404486 38.0 34.0 40.0 30.0 40.0 30 33.584280309099725 36.0 31.0 39.0 23.0 40.0 31 34.54198526285654 37.0 33.0 39.0 25.0 40.0 32 34.74662496341352 37.0 33.0 39.0 27.0 40.0 33 35.27359214132959 37.0 34.0 39.0 29.0 40.0 34 35.45200921231699 38.0 34.0 40.0 29.0 41.0 35 35.677077524894834 38.0 35.0 40.0 30.0 41.0 36 35.48943531829709 38.0 34.0 40.0 28.0 41.0 37 35.696620583717355 38.0 35.0 40.0 30.0 41.0 38 35.368899670775036 38.0 34.0 40.0 29.0 41.0 39 35.18492359032536 37.0 34.0 40.0 28.0 41.0 40 34.828985683734665 37.0 33.0 40.0 26.0 41.0 41 34.3899724185964 37.0 33.0 40.0 24.0 41.0 42 35.18658573842745 37.0 34.0 40.0 29.0 41.0 43 35.21637835447338 38.0 34.0 40.0 29.0 41.0 44 35.71675116275592 38.0 35.0 40.0 30.0 41.0 45 36.02438208896552 38.0 35.0 40.0 31.0 41.0 46 35.763160986948506 38.0 35.0 40.0 30.0 41.0 47 35.37972927068445 38.0 34.0 40.0 27.0 41.0 48 35.62728144782073 38.0 34.0 40.0 29.0 41.0 49 35.93679457515879 38.0 35.0 40.0 30.0 41.0 50 35.59250452390566 38.0 34.0 40.0 28.0 41.0 51 34.94064016202739 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 12.0 10 10.0 11 17.0 12 17.0 13 24.0 14 43.0 15 76.0 16 236.0 17 676.0 18 1443.0 19 2600.0 20 3947.0 21 4756.0 22 5381.0 23 5616.0 24 6642.0 25 8360.0 26 11143.0 27 14876.0 28 19786.0 29 26639.0 30 36423.0 31 49672.0 32 66838.0 33 85083.0 34 100106.0 35 120730.0 36 135254.0 37 135094.0 38 84395.0 39 10240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.411990539856305 3.207112626557196 42.24921966633124 14.131677167255255 2 16.43197904582444 24.74133087215774 41.28258867816497 17.544101403852853 3 16.41648987649257 24.784807368144442 42.0277779558142 16.770924799548784 4 15.76925624213524 3.461882756602125 60.312582119302924 20.45627888195971 5 32.39639882154127 4.304814033828346 40.88852284599066 22.41026429863973 6 18.047766461782345 21.994834094973175 43.84428364194168 16.1131158013028 7 66.79677568905439 1.541439403164918 27.474795382732033 4.1869895250486575 8 64.90154229397803 17.849718738049305 10.669473945080748 6.579265022891924 9 60.963234053099015 3.936064981872331 10.836650152007502 24.264050813021157 10 42.09144378286108 24.129134807047677 18.12478502101186 15.654636389079387 11 34.25136037635477 20.33183141801743 26.595010564681704 18.8217976409461 12 26.420143184017743 16.510279467343487 29.0205076601954 28.049069688443375 13 25.99061249516631 18.24720286966238 38.19415513524716 17.568029499924158 14 20.6514424155413 26.3586137941201 28.190822293294364 24.799121497044236 15 14.417211992249007 21.68173923075444 41.44175324578214 22.459295531214416 16 18.35701573913248 23.17938167236027 26.1142053842489 32.349397204258345 17 19.26051500953919 26.24901456836492 33.324787584736434 21.165682837359448 18 18.323153210317283 23.45220469631614 31.11955715930771 27.105084934058866 19 18.760161429190994 26.400487962244885 28.09948960516505 26.739861003399074 20 22.136800343539093 25.459066932439452 37.02691269876877 15.377220025252686 21 23.315793184338208 31.355526642439468 27.852837936287173 17.47584223693515 22 18.66060345803717 20.585746973202667 35.2915916243118 25.462057944448365 23 20.807829614864477 29.46456612166155 29.621807895844416 20.10579636762956 24 22.490807979165464 23.07298710232893 26.47216542860134 27.96403948990427 25 17.932612499439184 34.4197116237136 23.265800555046372 24.381875321800845 26 17.31507534145607 22.480980368279035 32.19012581478371 28.013818475481177 27 21.661443077836815 28.421237039838143 25.638314009259318 24.279005873065724 28 14.443169703612075 26.64040985410271 34.054914980483645 24.861505461801574 29 22.477562068840278 22.2295217158154 29.985429498642297 25.307486716702027 30 18.54074933396572 32.386143923225 28.667675065001102 20.405431677808185 31 23.425392410093384 23.56650408379961 23.68731960458821 29.320783901518794 32 30.156237648722733 29.576622250138335 22.301946935174087 17.965193165964845 33 22.387831708572882 26.1103597973803 21.80319568268781 29.69861281135901 34 24.999519301641424 25.33857187722323 28.853972384413407 20.807936436721935 35 24.68311295984139 27.22312308655348 23.840608970045015 24.253154983560115 36 22.166496819913302 26.52066255188872 26.86494939848612 24.44789122971186 37 23.37572024637393 29.543934761755214 27.73757715208655 19.342767839784305 38 23.204164343291268 26.670106330476916 20.967314648054025 29.15841467817779 39 28.241135388158582 27.646671751387082 24.172931768606766 19.93926109184757 40 24.47951049952037 28.021936936648228 26.227329731300298 21.2712228325311 41 23.91784117298945 29.67479153714516 22.56515599195845 23.842211297906932 42 26.697666369701906 20.63093261890875 29.928066161185633 22.74333485020371 43 28.22115970081334 21.3667215731014 25.33248303134794 25.079635694737313 44 22.661722951103364 23.347519276004178 29.428246690124748 24.562511082767713 45 20.220523042542872 18.878947334687833 27.246837538909862 33.65369208385943 46 29.831712845755646 24.84441396460778 24.48228786781436 20.84158532182221 47 16.523311733953754 23.590859467300763 38.83754318273588 21.048285616009604 48 21.537957010611684 27.6378055372178 25.381086976492785 25.443150475677733 49 22.876007597170503 19.47116771245265 34.624595946324156 23.028228744052694 50 25.72783072581179 20.129724463700864 27.804554456714715 26.337890353772625 51 20.492598313496515 20.391972123768078 26.622463782049227 32.49296578068618 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 398.5 2 677.0 3 3329.0 4 5981.0 5 4090.5 6 2200.0 7 2115.0 8 2030.0 9 2156.0 10 2282.0 11 2199.0 12 2116.0 13 2035.5 14 1955.0 15 1913.5 16 1872.0 17 1760.5 18 1649.0 19 1731.5 20 1814.0 21 2182.5 22 2551.0 23 2754.0 24 2957.0 25 3829.0 26 5669.5 27 6638.0 28 7769.5 29 8901.0 30 10467.0 31 12033.0 32 14147.5 33 16262.0 34 17969.0 35 19676.0 36 21211.5 37 22747.0 38 24687.5 39 26628.0 40 29848.0 41 33068.0 42 35915.0 43 38762.0 44 43066.0 45 47370.0 46 126423.5 47 205477.0 48 155053.5 49 104630.0 50 96003.5 51 87377.0 52 72844.5 53 58312.0 54 52027.5 55 45743.0 56 43460.0 57 41177.0 58 39192.0 59 37207.0 60 33407.5 61 29608.0 62 25840.5 63 22073.0 64 18210.5 65 14348.0 66 12077.0 67 9806.0 68 7771.5 69 5737.0 70 5010.5 71 4284.0 72 3322.0 73 2360.0 74 1932.0 75 1180.5 76 857.0 77 621.5 78 386.0 79 255.0 80 124.0 81 114.0 82 104.0 83 60.5 84 17.0 85 10.5 86 4.0 87 5.0 88 6.0 89 6.5 90 7.0 91 3.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 936138.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.920820525496225 #Duplication Level Percentage of deduplicated Percentage of total 1 73.30040789723363 21.199079412415596 2 10.2091870233527 5.905161312272169 3 3.635366815536293 3.1541337364940962 4 1.8086354282862878 2.0922888247008697 5 1.224670872019095 1.7709243246233606 6 0.8982326745070527 1.5586575581732967 7 0.7463284660402583 1.510910213359345 8 0.6780498486686363 1.5687806384548406 9 0.6273784756780721 1.6329870266980433 >10 6.7193368846169275 33.907505812751275 >50 0.08724940709227928 1.7161854979501494 >100 0.05354791722146717 3.1210164898237758 >500 0.0037446095959067847 0.6690599907745327 >1k 0.004493531515088142 2.7496654525356727 >5k 0.0018723047979533924 4.090384566454208 >10k+ 0.0014978438383627139 13.353259142518844 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 45555 4.866269716644341 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 37222 3.9761231784202757 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTC 27099 2.894765515340687 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGAAGGT 13426 1.434190258273887 No Hit GCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 9875 1.0548658424292146 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTA 8143 0.8698503853064399 No Hit GAACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCT 7409 0.7914431419299292 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTC 6497 0.6940216079253272 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCT 5846 0.6244805787180949 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3243 0.3464232837466271 No Hit CTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGCT 3044 0.32516573411185107 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGT 2956 0.31576541065526664 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATG 2714 0.28991452114965954 No Hit CCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 2647 0.28275745669976005 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 1944 0.20766169090454611 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTAT 1909 0.2039229258934046 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTACGAAGG 1612 0.1721968342274323 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTT 1568 0.16749667249914008 No Hit TGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGCTT 1344 0.14356857642783435 Illumina Single End Adapter 1 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTACGCAGGTCGTATGCCGTCTTCTGC 1281 0.13683879940777963 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTG 1128 0.12049505521621812 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.39577498189369514 0.0 2 0.0 0.0 0.0 2.2636619814599985 0.0 3 0.0 0.0 0.0 2.76358827437835 0.0 4 0.0 0.0 0.0 4.19713760150747 0.0 5 0.0 0.0 0.0 8.253056707451252 0.0 6 0.0 0.0 0.0 8.935968842200616 0.0 7 0.0 0.0 0.0 10.115495792287035 0.0 8 0.0 0.0 0.0 11.558445442872738 0.0 9 0.0 0.0 0.0 11.926553563683987 0.0 10 0.0 0.0 0.0 16.87881487558458 0.0 11 0.0 0.0 0.0 18.217079105858325 0.0 12 0.0 0.0 0.0 24.643802516295676 0.0 13 0.0 0.0 0.0 25.338999164653075 0.0 14 0.0 0.0 0.0 25.68232461453333 0.0 15 0.0 0.0 0.0 26.90928046933251 0.0 16 0.0 0.0 0.0 27.670493025600926 0.0 17 0.0 0.0 0.0 28.362805483806873 0.0 18 0.0 0.0 0.0 28.985897378377974 0.0 19 1.0682185746118628E-4 0.0 0.0 31.127141511187453 0.0 20 2.1364371492237256E-4 0.0 0.0 31.866455586676324 0.0 21 2.1364371492237256E-4 0.0 0.0 32.58771676825425 0.0 22 2.1364371492237256E-4 0.0 0.0 33.47797012833578 0.0 23 2.1364371492237256E-4 0.0 0.0 34.20767023665314 0.0 24 2.1364371492237256E-4 0.0 0.0 34.76602808560276 0.0 25 2.1364371492237256E-4 0.0 0.0 35.25463126163023 0.0 26 2.1364371492237256E-4 0.0 0.0 35.72539518746168 0.0 27 2.1364371492237256E-4 0.0 0.0 36.25576570975647 0.0 28 2.1364371492237256E-4 0.0 0.0 36.71937257113802 0.0 29 2.1364371492237256E-4 0.0 0.0 37.22816507822564 0.0 30 2.1364371492237256E-4 0.0 0.0 37.827969807870204 0.0 31 2.1364371492237256E-4 0.0 0.0 38.34391937940774 0.0 32 2.1364371492237256E-4 0.0 0.0 38.821840369689085 0.0 33 2.1364371492237256E-4 0.0 0.0 39.30841393042479 0.0 34 2.1364371492237256E-4 0.0 0.0 39.82393621453247 0.0 35 2.1364371492237256E-4 0.0 0.0 40.33700159591855 0.0 36 2.1364371492237256E-4 0.0 0.0 40.85231023631131 0.0 37 2.1364371492237256E-4 0.0 0.0 41.37328043514952 0.0 38 2.1364371492237256E-4 0.0 0.0 41.93067688738199 0.0 39 2.1364371492237256E-4 0.0 0.0 42.78129933834541 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGG 20 7.0326135E-4 45.000004 37 CGATCGA 20 7.0326135E-4 45.000004 41 TCGAATA 30 2.1650685E-6 44.999996 44 TACGGCT 4895 0.0 44.126663 7 ACGGCTG 4945 0.0 43.816986 8 GCGAACC 135 0.0 43.333336 33 TGATACC 4215 0.0 43.29182 4 GATACCT 4260 0.0 42.940144 5 CGGCTGT 5195 0.0 42.57459 9 TAAGGCG 135 0.0 41.666668 29 CGTTTTT 1675 0.0 41.507465 1 TCGTTCA 55 6.002665E-11 40.909092 16 TTATACG 105 0.0 40.714287 26 ATACCTG 4515 0.0 40.56478 6 GCGACTG 985 0.0 40.431473 11 ATGATAC 16220 0.0 40.311344 3 ACCACCT 1830 0.0 40.204918 14 AATGATC 960 0.0 40.07812 2 TTCGGGA 785 0.0 39.840763 4 CCGGTGA 260 0.0 39.80769 18 >>END_MODULE