##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933822.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 698741 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.522901904997703 30.0 16.0 31.0 16.0 34.0 2 26.50100967311207 30.0 16.0 33.0 16.0 34.0 3 27.566199779317373 31.0 25.0 33.0 16.0 34.0 4 31.584694471914485 35.0 28.0 35.0 19.0 37.0 5 33.33990992370563 35.0 33.0 37.0 28.0 37.0 6 31.903439185620996 35.0 31.0 37.0 17.0 37.0 7 33.08663868300272 35.0 32.0 35.0 28.0 37.0 8 32.41088328865774 35.0 32.0 37.0 23.0 37.0 9 34.26234613397525 35.0 32.0 39.0 28.0 39.0 10 33.406004513832734 35.0 32.0 37.0 27.0 39.0 11 33.98161121216588 35.0 32.0 39.0 27.0 39.0 12 34.253564625519324 35.0 32.0 39.0 27.0 39.0 13 34.48257938206002 35.0 33.0 38.0 27.0 39.0 14 34.48535151078869 37.0 32.0 39.0 27.0 40.0 15 34.96227929948293 37.0 33.0 39.0 27.0 40.0 16 34.73823204878489 36.0 32.0 39.0 27.0 40.0 17 34.14561618682745 36.0 32.0 38.0 27.0 40.0 18 34.43590400448807 36.0 32.0 39.0 27.0 40.0 19 34.22201502416489 36.0 32.0 39.0 27.0 40.0 20 34.26656944418605 36.0 32.0 39.0 26.0 40.0 21 33.97892638330941 36.0 32.0 39.0 25.0 40.0 22 35.03009269529053 37.0 33.0 39.0 27.0 40.0 23 35.560493802424645 37.0 34.0 39.0 29.0 40.0 24 35.8550249663323 38.0 34.0 40.0 30.0 40.0 25 33.86884267561228 36.0 32.0 39.0 24.0 40.0 26 34.74248970648638 37.0 33.0 39.0 27.0 40.0 27 34.88653449561426 37.0 33.0 39.0 27.0 40.0 28 35.081754183595926 37.0 33.0 39.0 27.0 40.0 29 35.510478131382015 38.0 34.0 40.0 28.0 40.0 30 33.18837165702313 36.0 31.0 39.0 22.0 40.0 31 34.095461694676565 36.0 31.0 39.0 25.0 40.0 32 34.482915701239804 37.0 33.0 39.0 26.0 40.0 33 35.05497315886716 37.0 34.0 39.0 27.0 40.0 34 35.344861686948384 38.0 34.0 40.0 29.0 40.0 35 35.34528530600036 38.0 34.0 40.0 27.0 41.0 36 35.539726450859476 38.0 35.0 40.0 29.0 41.0 37 35.359493717987064 38.0 35.0 40.0 27.0 41.0 38 35.1874256698834 37.0 34.0 40.0 28.0 41.0 39 35.12410893306676 37.0 34.0 40.0 28.0 41.0 40 34.57998886568843 37.0 33.0 40.0 26.0 41.0 41 34.146062704206564 37.0 33.0 39.0 24.0 40.0 42 35.04039837364631 37.0 34.0 40.0 27.0 41.0 43 35.20803273315864 38.0 34.0 40.0 28.0 40.0 44 35.70363696992162 38.0 35.0 40.0 29.0 41.0 45 35.88838782896667 38.0 35.0 40.0 30.0 41.0 46 35.58853709743668 38.0 35.0 40.0 29.0 41.0 47 35.157687898663454 37.0 34.0 40.0 26.0 41.0 48 35.26695299116554 37.0 34.0 40.0 28.0 41.0 49 35.536105652881396 38.0 34.0 40.0 29.0 41.0 50 35.320041331480475 37.0 34.0 40.0 28.0 41.0 51 34.78218825000966 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 10.0 10 10.0 11 23.0 12 20.0 13 25.0 14 39.0 15 61.0 16 173.0 17 429.0 18 1100.0 19 2170.0 20 3439.0 21 4274.0 22 4770.0 23 4764.0 24 5287.0 25 6316.0 26 8460.0 27 11268.0 28 15085.0 29 20442.0 30 27517.0 31 37860.0 32 51006.0 33 64984.0 34 77842.0 35 91263.0 36 99358.0 37 95902.0 38 58030.0 39 6813.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.52491266434916 3.5005817606237506 39.43335227215807 14.541153302869017 2 15.673475579649685 27.953705307116657 38.44614814358969 17.926670969643972 3 16.374164389952785 27.862684456758657 39.79900993358054 15.964141219708017 4 15.607070430960828 3.4536401899988696 61.04808505583614 19.89120432320416 5 34.0177547904016 4.648503522764515 38.550335532049786 22.783406154784107 6 17.038502105930522 24.36897219427513 42.75647199749263 15.836053702301712 7 62.683168727754634 1.8639238287147883 30.71137946678383 4.741527976746749 8 59.66903330418567 20.000973178903198 12.139691244681504 8.190302272229625 9 55.233197994679 4.430969414990677 12.654188032475552 27.681644557854767 10 40.78277931307881 22.032627253875184 20.509602270369136 16.67499116267687 11 33.41252338133872 20.48155181962988 27.25101289318932 18.85491190584208 12 24.015193040053468 16.526152036305298 30.088688083281216 29.369966840360018 13 24.99237915050069 19.541718605320142 39.02418778918083 16.441714454998348 14 20.295646026209997 28.590851259622664 26.068171182169074 25.045331531998265 15 13.638959213785936 22.260179379770186 41.38271548399192 22.718145922451953 16 15.80013195161011 24.4124790158299 25.29463706867065 34.49275196388934 17 16.339101326528713 28.20272461469987 34.07056405735459 21.387610001416835 18 16.060457308215774 23.436724050828563 32.028176391538494 28.474642249417165 19 16.01394508122466 27.332445069059926 28.385911231772575 28.267698617942845 20 20.817441655778033 24.902216987410213 38.792199112403594 15.488142244408158 21 22.071554410003134 33.1109810358917 27.240565531434395 17.576899022670776 22 17.521084350281434 20.52835027571017 35.3149450225477 26.635620351460698 23 20.121904969080102 30.40354008137493 28.64280183930813 20.83175311023684 24 22.086295208095706 22.68751940991011 26.115828325516894 29.110357056477294 25 16.03083259748605 35.664287625887134 23.045735115014004 25.259144661612815 26 19.633168799311907 21.97724192511961 30.73256041938286 27.657028856185622 27 21.62589571815594 29.97662939486877 23.96596163671518 24.43151325026011 28 14.611565658806338 27.166145968248607 33.04772440718378 25.174563965761276 29 24.956886743442848 23.451894192554896 25.78838224749943 25.802836816502822 30 17.067125014848134 34.524952736421646 27.37366205790128 21.034260190828935 31 21.970944885157735 23.24366253017928 20.730857356302263 34.05453522836072 32 23.354433187690432 35.981715685783435 19.861007154296082 20.802843972230054 33 17.901482809796477 28.674430153662083 20.327131226019368 33.09695581052207 34 26.195256897763265 23.121299594556497 23.01353434248169 27.669909165198547 35 17.83064111022539 29.730615492721913 21.934736905376955 30.504006491675746 36 23.318940780632595 29.661204938596704 19.88562285596523 27.13423142480547 37 15.93895305986052 33.34754937809575 27.74618921746398 22.967308344579752 38 17.860552050044294 30.276311251236155 19.853565197977506 32.00957150074205 39 20.486131485056696 31.712608820721844 23.450892390742776 24.350367303478684 40 18.151360804647215 28.543623459908606 25.14107516232767 28.163940573116502 41 17.452246254334582 29.482597986950815 21.076765210571587 31.98839054814302 42 17.857689759152535 21.928439865415083 29.462132607074725 30.75173776835766 43 23.44359354896879 28.58283684512573 21.822105758786158 26.151463847119317 44 20.334000724159594 23.46964039608381 29.276799271833198 26.919559607923393 45 18.058050121575807 18.86221074761607 26.87490787001192 36.204831260796205 46 26.941169904156187 28.34211818112863 23.387921991124035 21.328789923591145 47 14.330488693235404 24.48518120448063 39.221828975256926 21.96250112702704 48 20.554254008280605 25.311095241298275 24.5490102913669 29.585640459054215 49 18.53533712777696 19.40346995524808 35.75387733079925 26.307315586175704 50 22.89761156136537 22.050373457404103 27.601786641974634 27.45022833925589 51 19.90980921400061 19.191946658346943 26.108958827376664 34.78928530027578 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 76.0 1 230.0 2 384.0 3 2140.5 4 3897.0 5 2740.5 6 1584.0 7 1623.0 8 1662.0 9 1838.5 10 2015.0 11 1959.0 12 1903.0 13 1942.5 14 1982.0 15 1838.0 16 1694.0 17 1664.0 18 1634.0 19 1707.0 20 1780.0 21 1899.5 22 2019.0 23 2420.5 24 2822.0 25 3441.0 26 4674.0 27 5288.0 28 5934.5 29 6581.0 30 7383.0 31 8185.0 32 9613.0 33 11041.0 34 12722.0 35 14403.0 36 15396.0 37 16389.0 38 17539.0 39 18689.0 40 20742.0 41 22795.0 42 25382.0 43 27969.0 44 32194.0 45 36419.0 46 101028.0 47 165637.0 48 125673.0 49 85709.0 50 78117.0 51 70525.0 52 56591.5 53 42658.0 54 36819.5 55 30981.0 56 28613.5 57 26246.0 58 24494.5 59 22743.0 60 20754.0 61 18765.0 62 16366.5 63 13968.0 64 11635.0 65 9302.0 66 7772.0 67 6242.0 68 5312.5 69 4383.0 70 3582.0 71 2781.0 72 2191.5 73 1602.0 74 1320.0 75 759.5 76 481.0 77 392.0 78 303.0 79 176.0 80 49.0 81 33.0 82 17.0 83 16.5 84 16.0 85 19.0 86 22.0 87 11.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 698741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.635621088399294 #Duplication Level Percentage of deduplicated Percentage of total 1 74.48741498231736 21.329933912879966 2 10.1382003851319 5.806273294938017 3 3.7060548565126714 3.183755478117566 4 1.7509436593581844 2.00557436706065 5 1.1213501325682556 1.6055278751825441 6 0.7650118935300719 1.3143954426747602 7 0.6463669681779756 1.2956383709361368 8 0.5592852502343623 1.2812384404833423 9 0.5054133738113369 1.3025543278923861 >10 6.175433029804931 32.48912014461645 >50 0.07657314298770966 1.51065304921978 >100 0.05426043907074096 3.2763004995181233 >500 0.003549748350422306 0.6218029757528856 >1k 0.006085282886438239 4.027924087210074 >5k 0.002028427628812746 4.105322729451151 >10k+ 0.002028427628812746 14.843985004066202 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC 36684 5.250013953668097 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCG 30465 4.359984600875003 No Hit GAATCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTC 23209 3.3215454653440974 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACAACCAT 11864 1.6979109569926483 No Hit GCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 9928 1.4208411986701797 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACAACCATCGTA 6733 0.9635902287113538 No Hit GAACTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCT 6217 0.889743123703919 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTC 5393 0.7718167389633641 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCT 4764 0.6817976904174794 No Hit CCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 3684 0.5272339822623834 No Hit CTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGCT 3558 0.5092015496442888 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGACAACCATCGT 2317 0.33159639981051636 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGACAACCATCGTATG 2290 0.3277323071066389 No Hit TCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC 2148 0.3074100417751356 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2050 0.2933848164055065 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTT 1650 0.23613899857028572 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGACAACCATCGTAT 1513 0.2165323059617226 No Hit CGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTG 1431 0.20479691330550234 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGACAACCA 1293 0.18504710615235115 No Hit TGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGCTT 1040 0.148839126371574 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGC 757 0.1083377102531553 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5866265182664249 0.0 2 0.0 0.0 0.0 3.15166850091808 0.0 3 0.0 0.0 0.0 3.833036847701795 0.0 4 0.0 0.0 0.0 5.556135964541941 0.0 5 0.0 0.0 0.0 10.385250042576576 0.0 6 0.0 0.0 0.0 11.21302456847387 0.0 7 0.0 0.0 0.0 12.579052896566825 0.0 8 0.0 0.0 0.0 14.260935024565612 0.0 9 0.0 0.0 0.0 14.647916753131703 0.0 10 0.0 0.0 0.0 20.128917581764917 0.0 11 0.0 0.0 0.0 21.52686045330101 0.0 12 0.0 0.0 0.0 28.561226548892936 0.0 13 0.0 0.0 0.0 29.315869542505734 0.0 14 0.0 0.0 0.0 29.714157320094284 0.0 15 0.0 0.0 0.0 31.071885004601132 0.0 16 0.0 0.0 0.0 31.924704575801336 0.0 17 0.0 0.0 0.0 32.7228543909689 0.0 18 0.0 0.0 0.0 33.366869841615134 0.0 19 0.0 0.0 0.0 35.8418927757209 0.0 20 0.0 0.0 0.0 36.60540887109816 0.0 21 0.0 0.0 0.0 37.33858468302275 0.0 22 0.0 0.0 0.0 38.209866030474814 0.0 23 0.0 0.0 0.0 38.88221816094948 0.0 24 0.0 0.0 0.0 39.47285188646437 0.0 25 0.0 0.0 0.0 39.95357364173564 0.0 26 0.0 0.0 0.0 40.45790929686393 0.0 27 0.0 0.0 0.0 40.98385524822502 0.0 28 0.0 0.0 0.0 41.39745628208449 0.0 29 0.0 0.0 0.0 41.85399167932038 0.0 30 0.0 0.0 0.0 42.38151189067194 0.0 31 0.0 0.0 0.0 42.851213826009925 0.0 32 0.0 0.0 0.0 43.296300059678764 0.0 33 0.0 0.0 0.0 43.764141505937104 0.0 34 0.0 0.0 0.0 44.22482722496605 0.0 35 0.0 0.0 0.0 44.68007459130064 0.0 36 0.0 0.0 0.0 45.13789801943782 0.0 37 0.0 0.0 0.0 45.59242981304947 0.0 38 0.0 0.0 0.0 46.05454667752429 0.0 39 0.0 0.0 0.0 46.55415955268118 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAAAG 35 1.2110104E-7 45.000004 20 CTTCGAA 20 7.0313853E-4 45.0 38 GCGCGAA 25 3.8892304E-5 45.0 18 CGCGCGA 40 6.8084773E-9 45.0 41 TACGGCT 4085 0.0 43.953487 7 TGATACC 3535 0.0 43.790665 4 GATACCT 3565 0.0 43.42216 5 ACGGCTG 4150 0.0 43.319275 8 CGGCGAA 100 0.0 42.75 31 CGTTTTT 1330 0.0 42.462406 1 CGGCTGT 4335 0.0 41.98962 9 GGCGACT 775 0.0 41.806454 10 ATACCTG 3710 0.0 41.725067 6 ACCACCT 1685 0.0 41.66172 14 GAATCTG 2980 0.0 40.998325 1 ACCGGTG 280 0.0 40.982143 17 GCGACTG 775 0.0 40.935486 11 GGCGAAC 105 0.0 40.714287 32 CACCGGT 310 0.0 40.645164 16 CGGGATC 150 0.0 40.500004 6 >>END_MODULE