##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933821.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 408783 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.826458047423696 25.0 16.0 31.0 16.0 33.0 2 24.587069423141372 28.0 16.0 31.0 16.0 34.0 3 25.67425749113833 30.0 16.0 33.0 16.0 34.0 4 30.41380634713283 32.0 28.0 35.0 19.0 37.0 5 33.03214174757757 35.0 32.0 35.0 28.0 37.0 6 31.10155265752245 35.0 28.0 35.0 17.0 37.0 7 33.12454774293452 35.0 32.0 35.0 28.0 37.0 8 31.56980353879687 35.0 28.0 36.0 17.0 37.0 9 34.0957256050276 35.0 32.0 38.0 28.0 39.0 10 33.896319073934094 35.0 32.0 38.0 28.0 39.0 11 34.67360188657552 35.0 33.0 39.0 28.0 39.0 12 34.70923937639285 37.0 34.0 39.0 27.0 39.0 13 34.89918367446787 37.0 34.0 39.0 30.0 39.0 14 34.55299266358924 36.0 33.0 39.0 27.0 40.0 15 35.2624644371219 37.0 34.0 39.0 27.0 40.0 16 34.42649278468038 36.0 32.0 38.0 27.0 40.0 17 34.06399483344464 36.0 32.0 38.0 27.0 40.0 18 34.44208051704694 36.0 32.0 39.0 27.0 40.0 19 33.89887299618624 35.0 32.0 39.0 27.0 40.0 20 34.04550825254475 36.0 32.0 39.0 25.0 40.0 21 34.07423743159573 36.0 32.0 39.0 26.0 40.0 22 35.44573037528469 37.0 34.0 39.0 30.0 40.0 23 35.69846593424873 37.0 34.0 39.0 30.0 40.0 24 35.93952292536627 38.0 34.0 39.0 30.0 40.0 25 33.9898943938471 36.0 32.0 39.0 25.0 40.0 26 35.184687230144114 37.0 33.0 39.0 28.0 40.0 27 35.01501530151694 37.0 33.0 39.0 28.0 40.0 28 35.134643563944685 37.0 33.0 39.0 27.0 40.0 29 35.474868084044594 38.0 34.0 40.0 27.0 40.0 30 33.13710941991228 36.0 31.0 39.0 21.0 40.0 31 34.225070514184786 36.0 31.0 39.0 25.0 40.0 32 34.4639258481884 36.0 33.0 39.0 26.0 40.0 33 34.77287460584222 37.0 33.0 39.0 27.0 40.0 34 35.368576971155846 38.0 34.0 40.0 30.0 40.0 35 35.544371952845395 38.0 34.0 40.0 29.0 40.0 36 35.62675306947696 38.0 35.0 40.0 30.0 40.0 37 35.72457758761984 38.0 35.0 40.0 30.0 40.0 38 35.297025561239096 37.0 34.0 40.0 30.0 40.0 39 35.310962050770215 37.0 34.0 40.0 29.0 40.0 40 34.56581120056362 37.0 33.0 39.0 26.0 40.0 41 34.05244591873928 37.0 32.0 39.0 25.0 40.0 42 34.98499692991147 37.0 33.0 39.0 28.0 40.0 43 35.294794548696984 37.0 34.0 40.0 28.0 40.0 44 35.82092454921071 38.0 35.0 40.0 30.0 40.0 45 36.06709672368959 38.0 35.0 40.0 31.0 41.0 46 35.696095483422745 38.0 35.0 40.0 30.0 41.0 47 34.97626858259761 37.0 33.0 40.0 26.0 41.0 48 35.36131639525127 37.0 34.0 40.0 29.0 41.0 49 35.73205588295012 38.0 34.0 40.0 30.0 41.0 50 35.50690953390919 38.0 34.0 40.0 28.0 41.0 51 35.011509774134446 37.0 34.0 40.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 7.0 11 7.0 12 4.0 13 12.0 14 10.0 15 27.0 16 55.0 17 139.0 18 328.0 19 614.0 20 940.0 21 1331.0 22 1721.0 23 2170.0 24 2805.0 25 3704.0 26 5212.0 27 6814.0 28 9330.0 29 12476.0 30 17281.0 31 23734.0 32 32241.0 33 42683.0 34 52361.0 35 61799.0 36 61780.0 37 47242.0 38 20435.0 39 1518.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 53.5694977530866 3.1992524150955397 31.483941357639626 11.747308474178233 2 14.14662547121578 39.34752668286108 28.698845108529465 17.807002737393677 3 12.606688634312091 39.02999880132001 34.029056981332396 14.3342555830355 4 15.780010421177007 2.926246932969326 63.37641242419573 17.917330221657945 5 39.41039622489193 3.4358082405579493 35.103710281494095 22.05008525305602 6 14.2997629549174 30.989547021280238 37.22806476785972 17.482625255942636 7 46.825332756009914 1.1318963851236474 44.592607813925724 7.450163044940713 8 38.96541685931167 25.627044177473135 19.52356140054748 15.883977562667722 9 36.474119520625855 3.875895034773951 20.886142525496414 38.76384291910378 10 36.127236210899184 16.481605154813188 28.02685043164711 19.36430820264052 11 29.005853961637346 20.00670282276905 30.09078166166401 20.89666155392959 12 17.602737882935447 15.169172886348015 35.80726204367598 31.420827187040558 13 18.50076935684703 23.080705410939302 45.7360017417554 12.682523490458264 14 16.99165571953824 32.350171117683466 23.85568871503952 26.802484447738777 15 7.140707906150697 25.679150062502597 46.78741532793683 20.392726703409878 16 7.490037501559507 27.542241238016256 23.597116318437898 41.370604941986336 17 9.556170388690333 30.96777507870924 35.16780296636602 24.308251566234407 18 8.35455486162585 25.54876303564483 35.962356555923314 30.134325546806007 19 9.213935021759712 28.748749336445005 28.888676877463105 33.148638764332176 20 11.462316192209558 27.21492821374666 46.53593715981339 14.786818434230387 21 17.426360685253545 36.206985124136764 27.653302607985164 18.713351582624522 22 10.70152134506572 23.26564460850867 34.67585491568877 31.356979130736846 23 13.176428569681226 35.204497251598035 28.360523798690256 23.258550380030478 24 21.962263597067395 22.014369482096857 22.296915478383397 33.72645144245235 25 10.329441292813058 40.66729780837266 18.60767204115631 30.395588857657973 26 15.120491801273536 20.00523505135977 28.24897317158492 36.62529997578177 27 26.85507958990467 27.670426607760106 18.900492437307815 26.57400136502741 28 15.355090598190237 25.43329835144808 31.431590844041953 27.780020206319733 29 22.67853604479638 22.639884731018658 19.06243654946512 35.61914267471984 30 24.79799795979774 34.42486600470176 22.685141016138147 18.09199501936235 31 28.03321077442066 25.060973670627202 13.790446275896992 33.115369279055145 32 20.66695532837716 48.04798633994075 13.0705043996448 18.21455393203729 33 15.762886421402063 33.855370697900845 14.370215982562875 36.011526898134214 34 22.437576905106134 26.541710394023234 18.113522333365133 32.90719036750549 35 18.738792953718722 34.8218981709122 16.031243960732223 30.408064914636864 36 24.160006653897057 30.36770120088164 15.88862550546378 29.58366663975752 37 23.048414439935126 28.401621398150116 29.889941607160768 18.66002255475399 38 26.707568563271955 36.38067140756832 14.83525489073665 22.076505138423073 39 19.609915285126828 34.16776137950942 23.102966610646725 23.119356724717026 40 17.853726793922448 36.6020602618015 23.866941629177337 21.67727131509872 41 18.134071133095063 33.758742413456524 15.732063221807168 32.37512323164124 42 18.034018048695764 28.876200820484215 30.177869431948 22.911911698872018 43 24.77598138865853 28.85834293500464 17.76884068075238 28.59683499558445 44 23.00266889767921 17.94962119266212 29.734113209208797 29.313596700449875 45 20.74939515586509 15.694879679438726 25.344742809754813 38.21098235494137 46 31.03284627785402 26.874405246793533 24.175662882262717 17.91708559308973 47 11.187598310105852 19.80194871117439 47.644593830956765 21.365859147762993 48 20.080091393233086 23.452051577487325 22.782992443423527 33.68486458585607 49 16.943219263031974 16.768799093895783 43.27454908839164 23.013432554680602 50 25.24933766815156 16.14646401636076 29.736804123459148 28.867394192028534 51 18.380656729854223 14.324225811738748 25.838892517545986 41.45622494086104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 54.0 1 110.5 2 167.0 3 658.0 4 1149.0 5 908.0 6 667.0 7 950.0 8 1233.0 9 1640.0 10 2047.0 11 2067.0 12 2087.0 13 1953.0 14 1819.0 15 1651.0 16 1483.0 17 1465.0 18 1447.0 19 1432.5 20 1418.0 21 1416.0 22 1414.0 23 1592.5 24 1771.0 25 1871.5 26 2094.0 27 2216.0 28 2460.5 29 2705.0 30 2764.0 31 2823.0 32 2931.0 33 3039.0 34 3634.0 35 4229.0 36 4494.0 37 4759.0 38 5103.5 39 5448.0 40 6722.0 41 7996.0 42 9636.5 43 11277.0 44 15154.5 45 19032.0 46 82016.5 47 145001.0 48 109573.5 49 74146.0 50 65155.5 51 56165.0 52 39555.0 53 22945.0 54 17079.5 55 11214.0 56 8952.0 57 6690.0 58 5322.0 59 3954.0 60 3270.5 61 2587.0 62 2128.5 63 1670.0 64 1325.0 65 980.0 66 733.5 67 487.0 68 385.5 69 284.0 70 229.0 71 174.0 72 151.5 73 129.0 74 90.5 75 37.0 76 22.0 77 14.5 78 7.0 79 14.0 80 21.0 81 11.5 82 2.0 83 1.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 408783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.18300173930912 #Duplication Level Percentage of deduplicated Percentage of total 1 73.28538480213645 17.72260588136004 2 11.292182568584607 5.461577413933554 3 4.606700655498908 3.3421154989321966 4 2.4925143643279113 2.4110591683117937 5 1.5224164441207413 1.8408299758062345 6 1.1026139030509023 1.5998708361159832 7 0.8689406813951606 1.4709515806674935 8 0.6625799142186615 1.2818536974384942 9 0.5442259448086105 1.18449152728954 >10 3.2987375576596265 13.183033541022986 >50 0.15780529254673464 2.6720778505955485 >100 0.12948126567937202 6.495867000340033 >500 0.015173585821801408 2.458027853408777 >1k 0.011127296269321033 5.698377867964177 >5k 0.005057861940600469 7.756438012343958 >10k+ 0.005057861940600469 25.420822294469193 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGC 30466 7.452853959191062 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCG 26643 6.517638942911031 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 23451 5.736784553173688 No Hit GCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 12951 3.168184586932431 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGGAACAAT 10405 2.5453602522609793 No Hit GAACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 7599 1.8589324898540303 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGGAACAATCGTA 6940 1.6977222634013645 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTC 5973 1.4611664379389555 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCT 5690 1.391936553134548 No Hit CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT 5505 1.3466802680150594 No Hit CCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 4523 1.1064550140294485 No Hit TCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 4119 1.0076250724712135 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGGAACAATCGT 2477 0.6059449634647233 No Hit TGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCTT 2192 0.5362258215238892 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATG 2062 0.5044241076561403 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTAT 1705 0.4170917088039376 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTT 1426 0.3488403382723841 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCGGAACAA 1243 0.3040733102893222 No Hit CGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 1194 0.29208651044686296 No Hit GCTGTCTCTTATACACATCTGACGCCGGACCAATCGTATGCCGTCTTCTGC 1184 0.2896402247647285 No Hit TCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 1169 0.28597079624152666 No Hit TTCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 952 0.23288639693920735 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGC 873 0.21356074005034453 No Hit TGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 763 0.18665159754686472 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 760 0.18591771184222436 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCGGAACAATCG 726 0.17760034052296694 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGC 715 0.17490942627261896 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 690 0.16879371206728264 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCC 657 0.1607209693162387 No Hit GGCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 600 0.14677714092807187 No Hit TTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 585 0.14310771240487005 No Hit GCACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 567 0.13870439817702793 No Hit TGTCTCTTATACACATCTGACGCCGGAACCATCGTATGCCGTCTTCTGCTT 561 0.13723662676774717 Illumina Single End Adapter 1 (95% over 21bp) GAATGCTACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCG 542 0.1325886839716916 No Hit TTGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 537 0.13136554113062432 No Hit GGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG 520 0.1272068554709956 No Hit CGTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 494 0.12084651269744584 No Hit GCCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 467 0.11424154135568261 No Hit GCATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 450 0.1100828556960539 No Hit GAATGATACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGT 448 0.10959359855962698 No Hit GACTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 446 0.10910434142320008 No Hit TGCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT 432 0.10567954146821174 No Hit ACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 421 0.10298862721786375 No Hit TCTGTCTCTTATACACATCTGACGCCGGACCAATCGTATGCCGTCTTCTGC 413 0.10103159867215614 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.5203665514466111 0.0 2 0.0 0.0 0.0 7.8134364687376925 0.0 3 0.0 0.0 0.0 9.49085456097734 0.0 4 0.0 0.0 0.0 13.719259362546877 0.0 5 0.0 0.0 0.0 23.032024325864825 0.0 6 0.0 0.0 0.0 24.780629331454588 0.0 7 0.0 0.0 0.0 27.616119065616722 0.0 8 0.0 0.0 0.0 30.98587759275704 0.0 9 0.0 0.0 0.0 31.70655335471387 0.0 10 0.0 0.0 0.0 40.13425215823554 0.0 11 0.0 0.0 0.0 42.79581098039791 0.0 12 0.0 0.0 0.0 53.17809204394508 0.0 13 0.0 0.0 0.0 54.45847796997429 0.0 14 0.0 0.0 0.0 55.138300761039474 0.0 15 0.0 0.0 0.0 57.494073872935026 0.0 16 0.0 0.0 0.0 58.84858225513292 0.0 17 0.0 0.0 0.0 60.05778126781202 0.0 18 0.0 0.0 0.0 61.13463622508764 0.0 19 0.0 0.0 0.0 64.88210126154952 0.0 20 0.0 0.0 0.0 65.98855627557897 0.0 21 0.0 0.0 0.0 66.8599232355553 0.0 22 0.0 0.0 0.0 67.7892671661982 0.0 23 0.0 0.0 0.0 68.52633304222533 0.0 24 0.0 0.0 0.0 69.11882343443833 0.0 25 0.0 0.0 0.0 69.58851028540815 0.0 26 0.0 0.0 0.0 70.05330456501372 0.0 27 0.0 0.0 0.0 70.50415501623111 0.0 28 0.0 0.0 0.0 70.93616906769607 0.0 29 2.446285682134531E-4 0.0 0.0 71.34910209084038 0.0 30 2.446285682134531E-4 0.0 0.0 71.8187889418102 0.0 31 2.446285682134531E-4 0.0 0.0 72.26450219309511 0.0 32 2.446285682134531E-4 0.0 0.0 72.64538887380345 0.0 33 2.446285682134531E-4 0.0 0.0 72.98909201214336 0.0 34 2.446285682134531E-4 0.0 0.0 73.33303977905148 0.0 35 2.446285682134531E-4 0.0 0.0 73.70316280275843 0.0 36 2.446285682134531E-4 0.0 0.0 74.07059491221504 0.0 37 2.446285682134531E-4 0.0 0.0 74.41258565057744 0.0 38 2.446285682134531E-4 0.0 0.0 74.75384250323522 0.0 39 2.446285682134531E-4 0.0 0.0 75.09950267012083 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCCTT 20 7.0279464E-4 45.000004 18 CCTTAAG 20 7.0279464E-4 45.000004 25 ACCGGTG 40 6.7957444E-9 45.000004 17 CGACGAA 20 7.0279464E-4 45.000004 19 GACCGTG 20 7.0279464E-4 45.000004 15 TTCACCC 20 7.0279464E-4 45.000004 22 ACCGACG 20 7.0279464E-4 45.000004 17 TTCGTTG 40 6.7957444E-9 45.000004 1 TTCGTCG 20 7.0279464E-4 45.000004 1 GCGTTGG 40 6.7957444E-9 45.000004 2 GCACCGA 65 0.0 45.000004 9 TTTCACC 20 7.0279464E-4 45.000004 21 TAGTTGG 20 7.0279464E-4 45.000004 2 CTCGGGT 105 0.0 45.000004 4 ATGAGAC 20 7.0279464E-4 45.000004 11 TCTCGTG 20 7.0279464E-4 45.000004 1 TCTAACC 20 7.0279464E-4 45.000004 24 CGGGCTA 20 7.0279464E-4 45.000004 6 AGACCGT 20 7.0279464E-4 45.000004 14 TCATGAC 20 7.0279464E-4 45.000004 36 >>END_MODULE