##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933820.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 997064 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.3513726300418 30.0 16.0 31.0 16.0 34.0 2 26.19673461282325 30.0 16.0 33.0 16.0 34.0 3 27.265767292771578 31.0 25.0 33.0 16.0 34.0 4 31.399128842280938 35.0 28.0 35.0 19.0 37.0 5 33.32762992144937 35.0 32.0 35.0 28.0 37.0 6 31.75966838638242 35.0 30.0 37.0 17.0 37.0 7 33.126831376922645 35.0 32.0 35.0 28.0 37.0 8 32.30233264865645 35.0 32.0 37.0 19.0 37.0 9 34.24693399821877 35.0 32.0 38.0 28.0 39.0 10 33.14971255606461 34.0 31.0 37.0 27.0 39.0 11 33.85962084680622 35.0 32.0 37.0 27.0 39.0 12 34.04723768985742 35.0 32.0 39.0 27.0 39.0 13 34.28074927988575 35.0 33.0 37.0 27.0 39.0 14 34.32245974180193 36.0 32.0 39.0 25.0 40.0 15 34.77836126868486 37.0 32.0 39.0 27.0 40.0 16 34.58739258462847 36.0 32.0 39.0 27.0 40.0 17 33.98508821901102 36.0 32.0 38.0 26.0 40.0 18 34.34530882671523 36.0 32.0 39.0 27.0 40.0 19 34.18958562339027 36.0 32.0 39.0 27.0 40.0 20 33.81396179182079 36.0 31.0 39.0 25.0 40.0 21 33.71045690146269 36.0 32.0 39.0 25.0 40.0 22 34.83163768825271 37.0 33.0 39.0 27.0 40.0 23 35.247169690210455 37.0 33.0 39.0 28.0 40.0 24 35.53143128224467 37.0 34.0 39.0 29.0 40.0 25 33.60646558295154 36.0 32.0 39.0 24.0 40.0 26 34.477204071152904 36.0 32.0 39.0 27.0 40.0 27 34.70955124244783 37.0 33.0 39.0 27.0 40.0 28 34.88998599889275 37.0 33.0 39.0 27.0 40.0 29 35.30274586185039 37.0 34.0 40.0 27.0 40.0 30 33.321011489733856 36.0 31.0 39.0 23.0 40.0 31 34.2742160984651 36.0 32.0 39.0 25.0 40.0 32 34.427275480811666 37.0 33.0 39.0 25.0 40.0 33 34.84748120481734 37.0 33.0 39.0 25.0 40.0 34 35.15873504609534 38.0 34.0 40.0 27.0 40.0 35 35.1850212223087 38.0 34.0 40.0 27.0 41.0 36 35.103508902136674 38.0 34.0 40.0 26.0 41.0 37 35.47898530084328 38.0 35.0 40.0 29.0 41.0 38 35.149591199762504 38.0 34.0 40.0 27.0 41.0 39 34.90598998660066 37.0 34.0 40.0 27.0 41.0 40 34.44994503863343 37.0 33.0 40.0 25.0 40.0 41 34.15819947365465 37.0 33.0 39.0 24.0 40.0 42 34.83838249099356 37.0 33.0 40.0 27.0 40.0 43 34.84649932200942 37.0 34.0 40.0 27.0 40.0 44 35.528056373512634 38.0 35.0 40.0 29.0 41.0 45 35.79214473694768 38.0 35.0 40.0 30.0 41.0 46 35.47414107820561 38.0 35.0 40.0 29.0 41.0 47 34.93571726589266 37.0 34.0 40.0 26.0 41.0 48 35.33278906870572 37.0 34.0 40.0 28.0 41.0 49 35.536959513130554 38.0 35.0 40.0 29.0 41.0 50 35.08311101393692 38.0 34.0 40.0 26.0 41.0 51 34.59586044627025 37.0 33.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 10.0 11 18.0 12 24.0 13 26.0 14 32.0 15 92.0 16 235.0 17 817.0 18 1910.0 19 3622.0 20 5611.0 21 6868.0 22 7196.0 23 7095.0 24 8082.0 25 10432.0 26 13739.0 27 17474.0 28 22996.0 29 30189.0 30 40581.0 31 55491.0 32 73777.0 33 92780.0 34 109306.0 35 129124.0 36 141931.0 37 133148.0 38 76507.0 39 7945.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.99175980679274 2.929601309444529 41.13346786164178 11.945171022120947 2 15.635505845161394 30.242491956383944 38.007489990612434 16.114512207842225 3 13.97703657939711 30.140492485938715 40.39098794059358 15.49148299407059 4 14.068003658742068 2.9214774578161484 64.30560124525607 18.704917638185712 5 35.064850400776685 3.602276283167379 40.412450956006836 20.920422360049105 6 15.818944420819525 25.846685869713475 43.47393948633187 14.860430223135124 7 62.0602087729574 1.1177818073864867 32.648756749817466 4.1732526698386465 8 59.54061123458474 21.175872361252637 12.028916900018455 7.254599504144167 9 56.857132541140786 2.642558551908403 11.681496874824484 28.818812032126324 10 43.616558214919 15.989344716086428 22.011124662007656 18.382972406986912 11 34.23180457824172 20.02068071858978 26.422075212824854 19.325439490343648 12 23.034930556112748 15.160210377668836 30.71257211172001 31.092286954498405 13 24.78366483997015 19.19034284659761 40.96376962762671 15.062222685805526 14 21.22622018245569 27.91515890654963 27.81045148556161 23.04816942543307 15 13.219412194202176 21.420390265820448 43.11057264127478 22.249624898702592 16 15.86146927378784 22.914577198655252 25.50397968435326 35.71997384320365 17 17.232594898622356 27.49913746760489 34.1128553432879 21.15541229048486 18 16.72540579140356 22.361352932208966 32.241160045894745 28.672081230492726 19 16.894201375237696 27.343380164161978 28.18264424349891 27.57977421710141 20 18.96217293975111 25.621524796803413 40.037750836455835 15.378551426989642 21 20.213045501592678 33.76944709667584 28.66285413975432 17.354653261977166 22 16.53765455376987 19.665337430696525 36.907861481309126 26.889146534224484 23 18.768504328709092 30.67797052145098 29.913826996060433 20.639698153779495 24 20.85282389094381 24.46703521539239 25.835152006290468 28.84498888737333 25 15.797882583264464 36.86333073904985 22.89943273450852 24.43935394317717 26 18.138354207954556 20.732169650092672 31.97718501520464 29.152291126748132 27 21.27476270329688 26.257792879895376 25.335083806054577 27.13236061075317 28 14.496762494684393 25.319939341907844 34.34423467299993 25.83906349040784 29 24.264039219147417 18.570723644620607 29.068545248850626 28.096691887381354 30 16.735334943393802 29.668707324705334 29.08469265764284 24.51126507425802 31 22.23899368546051 19.959400800751006 26.247562844511485 31.554042669277 32 24.116606356261986 30.820388661109018 26.093009074643152 18.969995907985844 33 19.985477361533462 23.33451012171736 23.261796634920128 33.41821588182905 34 27.35621785562411 22.07942519236478 29.138550785105068 21.425806166906035 35 19.24169361244614 25.93394205387016 24.12222284627667 30.702141487407026 36 28.69825808573973 23.380244397551213 21.675539383630337 26.245958133078716 37 15.519063971821268 20.793449567931447 35.45479527893897 28.232691181308322 38 19.591821588182906 27.216006194186132 21.535829194515095 31.65634302311587 39 21.47655516596728 22.665846926576428 36.8008472876365 19.05675061981979 40 17.50048141342983 32.24196240161113 27.17608899729606 23.08146718766298 41 22.988093041168874 23.457671724182198 28.76605714377412 24.78817809087481 42 18.788061749295935 25.303591344186533 32.73270321664407 23.175643689873468 43 29.901390482456492 20.59095504400921 23.568196224114 25.939458249420298 44 20.892941676762977 18.57764396267441 32.10887164715605 28.42054271340656 45 17.949098553352645 17.88771834104932 27.993789766755196 36.169393338842845 46 29.03765455376987 23.457270546324008 26.922143413060745 20.582931486845375 47 14.292863848258486 22.32073367406706 41.66863912446944 21.71776335320501 48 20.279440437123395 25.294364253448126 27.722292651223995 26.703902658204488 49 19.138490608426338 19.79531905675062 37.63319104891963 23.432999285903414 50 25.583513194739755 18.191209390771306 29.212768688870522 27.012508725618417 51 20.0485625797341 18.738315694880168 26.95173028010238 34.26139144528335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 68.0 1 275.5 2 483.0 3 3463.0 4 6443.0 5 4568.0 6 2693.0 7 2577.5 8 2462.0 9 2553.0 10 2644.0 11 2684.0 12 2724.0 13 2660.0 14 2596.0 15 2412.5 16 2229.0 17 2318.5 18 2408.0 19 2392.5 20 2377.0 21 2464.5 22 2552.0 23 2945.0 24 3338.0 25 3747.5 26 5106.5 27 6056.0 28 6891.5 29 7727.0 30 9162.0 31 10597.0 32 11954.5 33 13312.0 34 15688.5 35 18065.0 36 19618.5 37 21172.0 38 24100.0 39 27028.0 40 30280.0 41 33532.0 42 37303.5 43 41075.0 44 47878.0 45 54681.0 46 159112.5 47 263544.0 48 194899.5 49 126255.0 50 113477.5 51 100700.0 52 81645.0 53 62590.0 54 55188.0 55 47786.0 56 42587.0 57 37388.0 58 32730.5 59 28073.0 60 24036.0 61 19999.0 62 16869.5 63 13740.0 64 11748.0 65 9756.0 66 7894.5 67 6033.0 68 4968.5 69 3904.0 70 3327.0 71 2750.0 72 2334.0 73 1918.0 74 1461.0 75 783.5 76 563.0 77 415.5 78 268.0 79 224.5 80 181.0 81 152.5 82 124.0 83 87.0 84 50.0 85 32.0 86 14.0 87 8.5 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 997064.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.903673213711535 #Duplication Level Percentage of deduplicated Percentage of total 1 75.7007411298705 23.3943096591329 2 10.441434907499508 6.4535738452721025 3 3.759267837231648 3.4852555429386896 4 1.8877163406631128 2.3334947564814477 5 1.1211296631304812 1.7323512369791443 6 0.8105925486481586 1.5030172339735355 7 0.6353438142696419 1.3744120330179437 8 0.516975870497667 1.2781162688987167 9 0.48473082673968154 1.3481966759557809 >10 4.490192448758925 25.4655395851811 >50 0.0849970793303479 1.793501243616814 >100 0.05337024829750102 3.1638757829940136 >500 0.005600581611465477 1.0838789286186141 >1k 0.004941689657175421 3.624977386198173 >5k 6.58891954290056E-4 1.6831379342403652 >10k+ 0.0023061218400151962 20.282361886500638 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 59623 5.979856859740197 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG 47007 4.71454189500373 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC 38057 3.8169064372999126 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCTATAGT 18188 1.8241557211974357 No Hit GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 12779 1.281662962457776 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCTATAGTCGTA 11952 1.1987194402766523 No Hit GAACTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCT 11610 1.1644187334012661 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTC 8862 0.8888095448236022 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCT 7670 0.7692585430824902 No Hit CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT 4333 0.4345759148861056 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGT 4209 0.4221394012821645 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3851 0.38623398297401174 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATG 3764 0.3775083645583433 No Hit CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 2773 0.27811655019136183 No Hit TCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 2355 0.23619346401033436 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTT 2245 0.22516107291006396 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTAT 2201 0.22074811646995582 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCCTATAG 2066 0.20720836375598758 No Hit TGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCTT 1852 0.18574534834273426 Illumina Single End Adapter 2 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTG 1494 0.14983993003458154 No Hit GCTGTCTCTTATACACATCTGACGCGCCTCTAGTCGTATGCCGTCTTCTGC 1225 0.12286071907119303 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 1182 0.11854805709563278 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 1040 0.10430624312982918 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGCCTATAGTCG 1015 0.10179888151613137 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.48392079144367867 0.0 2 0.0 0.0 0.0 2.580977750675985 0.0 3 0.0 0.0 0.0 3.1174528415427694 0.0 4 0.0 0.0 0.0 5.013519693821059 0.0 5 0.0 0.0 0.0 10.06434892845394 0.0 6 0.0 0.0 0.0 10.883955292739483 0.0 7 0.0 0.0 0.0 12.269523320468897 0.0 8 0.0 0.0 0.0 14.037915319377692 0.0 9 0.0 0.0 0.0 14.41331750018053 0.0 10 0.0 0.0 0.0 20.27302159139233 0.0 11 0.0 0.0 0.0 21.85426411945472 0.0 12 0.0 0.0 0.0 29.642630763922877 0.0 13 0.0 0.0 0.0 30.486809272022658 0.0 14 0.0 0.0 0.0 30.857999085314482 0.0 15 0.0 0.0 0.0 32.403035311675076 0.0 16 0.0 0.0 0.0 33.34329591681176 0.0 17 0.0 0.0 0.0 34.221474248393285 0.0 18 0.0 0.0 0.0 35.01259698474722 0.0 19 0.0 0.0 0.0 37.69507273354569 0.0 20 0.0 0.0 0.0 38.551286577391224 0.0 21 0.0 0.0 0.0 39.50267986809272 0.0 22 0.0 0.0 0.0 40.58575979074563 0.0 23 0.0 0.0 0.0 41.65901085587284 0.0 24 0.0 0.0 0.0 42.37541421613858 0.0 25 0.0 0.0 0.0 43.02943441945552 0.0 26 0.0 0.0 0.0 43.648652443574335 0.0 27 0.0 0.0 0.0 44.335769820192084 0.0 28 0.0 0.0 0.0 44.93081687835485 0.0 29 0.0 0.0 0.0 45.58784591560823 0.0 30 2.0058892909582534E-4 0.0 0.0 46.269547391140385 0.0 31 2.0058892909582534E-4 0.0 0.0 46.888564826330104 0.0 32 2.0058892909582534E-4 0.0 0.0 47.47438479375446 0.0 33 3.00883393643738E-4 0.0 0.0 48.05147914276315 0.0 34 3.00883393643738E-4 0.0 0.0 48.64813091235869 0.0 35 3.00883393643738E-4 0.0 0.0 49.2765760272159 0.0 36 3.00883393643738E-4 0.0 0.0 49.84695064709989 0.0 37 3.00883393643738E-4 0.0 0.0 50.43868798793257 0.0 38 3.00883393643738E-4 0.0 0.0 51.067835164041625 0.0 39 3.00883393643738E-4 0.0 0.0 52.00408399059639 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTCCG 30 2.1652104E-6 45.000004 1 CCGATCA 30 2.1652104E-6 45.000004 40 CGTAACC 70 0.0 45.000004 35 ATCGAAT 35 1.2117198E-7 45.000004 43 ACGTTGT 20 7.0328376E-4 45.0 15 GCGAAAT 20 7.0328376E-4 45.0 19 CACGCGA 20 7.0328376E-4 45.0 41 GTTCGCG 75 0.0 45.0 1 GCGATCG 25 3.8904327E-5 45.0 9 CGCAATT 25 3.8904327E-5 45.0 10 CGATCGT 20 7.0328376E-4 45.0 10 TACCGCG 20 7.0328376E-4 45.0 29 TACGGCT 7280 0.0 44.041893 7 ACGGCTG 7280 0.0 44.010986 8 TGATACC 5280 0.0 43.551136 4 CGTTTTT 2475 0.0 43.363636 1 GGCGACT 1600 0.0 43.3125 10 GATACCT 5315 0.0 43.306683 5 GCGACTG 1615 0.0 42.63158 11 CGGCTGT 7670 0.0 42.56519 9 >>END_MODULE