##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933819.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 359742 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.557035319756938 28.0 16.0 31.0 16.0 33.0 2 25.39550566795092 28.0 16.0 31.0 16.0 34.0 3 26.598086962323 30.0 16.0 33.0 16.0 34.0 4 31.060001334289574 33.0 28.0 35.0 19.0 37.0 5 33.15587559973537 35.0 32.0 35.0 28.0 37.0 6 31.34754073752856 35.0 28.0 36.0 17.0 37.0 7 32.98503927814934 35.0 32.0 35.0 28.0 37.0 8 31.841466940196028 35.0 30.0 36.0 17.0 37.0 9 34.168237236686295 35.0 32.0 37.0 28.0 39.0 10 33.30779836660718 35.0 32.0 37.0 27.0 39.0 11 33.835034552540435 35.0 32.0 38.0 27.0 39.0 12 34.105030827648704 35.0 32.0 39.0 27.0 39.0 13 34.235749509370606 35.0 32.0 37.0 27.0 39.0 14 34.273482106620854 36.0 32.0 39.0 25.0 40.0 15 34.79603160042475 36.0 32.0 39.0 27.0 40.0 16 34.60738529279317 36.0 32.0 39.0 27.0 40.0 17 34.00156501047973 36.0 32.0 38.0 27.0 40.0 18 34.38037538013354 36.0 32.0 38.0 27.0 40.0 19 34.067170360980924 36.0 32.0 39.0 27.0 40.0 20 33.65286510888359 35.0 31.0 39.0 25.0 40.0 21 33.83341672643172 36.0 32.0 39.0 25.0 40.0 22 34.9615252041741 37.0 33.0 39.0 27.0 40.0 23 35.273634993967896 37.0 33.0 39.0 28.0 40.0 24 35.70894418777902 37.0 34.0 39.0 30.0 40.0 25 33.77496928354209 36.0 32.0 39.0 24.0 40.0 26 34.71495683017273 37.0 33.0 39.0 27.0 40.0 27 34.610634843860325 37.0 33.0 39.0 27.0 40.0 28 34.777401582245055 37.0 33.0 39.0 27.0 40.0 29 35.17876700524265 37.0 33.0 40.0 27.0 40.0 30 33.48543400548171 36.0 31.0 39.0 23.0 40.0 31 34.28796748781071 36.0 32.0 39.0 25.0 40.0 32 34.43506457405585 37.0 33.0 39.0 26.0 40.0 33 34.91099732586131 37.0 34.0 39.0 26.0 40.0 34 34.94583340282758 37.0 34.0 40.0 25.0 40.0 35 35.367605117000515 38.0 34.0 40.0 27.0 41.0 36 35.10648464733059 38.0 34.0 40.0 25.0 41.0 37 35.241411900751096 38.0 34.0 40.0 27.0 41.0 38 34.7786608180307 37.0 34.0 40.0 25.0 41.0 39 34.77420484680688 37.0 33.0 40.0 26.0 40.0 40 34.57040601319835 37.0 33.0 40.0 25.0 40.0 41 33.96691239832992 37.0 32.0 39.0 24.0 40.0 42 34.78608836332705 37.0 33.0 40.0 26.0 40.0 43 35.009946016867644 38.0 34.0 40.0 27.0 40.0 44 35.65595343329386 38.0 35.0 40.0 30.0 41.0 45 35.83011991927548 38.0 35.0 40.0 30.0 41.0 46 35.65565043836972 38.0 35.0 40.0 30.0 41.0 47 34.94882165551979 37.0 34.0 40.0 26.0 41.0 48 35.4742760089175 38.0 35.0 40.0 29.0 41.0 49 35.68429596766572 38.0 35.0 40.0 30.0 41.0 50 35.34743788604055 38.0 35.0 40.0 28.0 41.0 51 35.05832235324205 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 8.0 11 8.0 12 8.0 13 7.0 14 12.0 15 28.0 16 66.0 17 246.0 18 772.0 19 1661.0 20 2382.0 21 2717.0 22 2979.0 23 2789.0 24 2837.0 25 3274.0 26 4409.0 27 5834.0 28 7961.0 29 10760.0 30 14860.0 31 20095.0 32 26874.0 33 34210.0 34 40763.0 35 48020.0 36 50760.0 37 46281.0 38 26342.0 39 2778.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.0592090998549 2.8781738023361187 34.90390335295851 12.158713744850475 2 13.894680076276888 35.9843999310617 33.92486837789305 16.19605161476836 3 13.935264717491979 35.95215459968533 35.706978890427024 14.405601792395661 4 14.370020737083799 2.9471120970028517 64.8103362965681 17.87253086934525 5 39.05993739958081 3.7335090147939356 36.2387488811426 20.967804704482656 6 15.663447693068921 30.643349956357614 38.60739085233306 15.085811498240407 7 56.491874732447144 1.3317877812432244 37.370949180245844 4.80538830606379 8 52.229931450873124 25.86742721172396 12.913143308259809 8.989498029143109 9 49.42681143708547 3.317655430836544 12.408337086022762 34.84719604605523 10 41.80273640553508 20.316782583073426 20.393782210584252 17.486698800807247 11 36.098648475852144 18.274207626576825 26.632697877923622 18.994446019647416 12 24.935926302739187 14.744455748842226 28.989942792334507 31.32967515608408 13 25.05656831840597 19.53594520517482 40.6399586370232 14.76752783939601 14 19.9934953383258 31.03112786385799 23.222754084871937 25.75262271294428 15 11.266685569102302 21.369203484719606 44.9702842592747 22.39382668690339 16 13.19167625687298 23.653896403533643 23.400381384436624 39.754045955156755 17 14.415330987207497 28.835109606328977 35.043725781254345 21.705833625209177 18 13.993361909368382 23.127963929705178 31.83336947034263 31.04530469058381 19 14.821733353347676 27.12193738846173 27.179478626348885 30.876850631841705 20 19.007232961400113 24.879496972830527 41.74324932868556 14.370020737083799 21 20.692329502810345 36.44639769612667 25.66589389062161 17.195378910441374 22 15.398257640197697 19.782232822411615 36.179817758282326 28.63969177910836 23 18.70173624430842 33.112063645612686 27.882204468758164 20.303995641320725 24 21.179067220396842 23.762029454442352 24.022493898404967 31.03640942675584 25 14.700813360686269 40.84176993512017 19.6763235874599 24.78109311673366 26 15.342940218267536 23.903241767711304 30.9627455231805 29.79107249084066 27 25.140239393787773 28.81453930872681 22.056918569419196 23.988302728066223 28 11.88546235913516 28.739207543183724 37.204440960466115 22.170889137215006 29 22.724897287500486 26.825613912192626 25.368736483368636 25.08075231693825 30 23.865436896442453 30.81180401509971 28.977155850581802 16.345603237876034 31 22.32989197813989 22.590078445107885 27.350990432031846 27.729039144720385 32 27.357661879902818 35.62275186105598 18.09602437302289 18.923561886018312 33 25.133289968922174 18.457394466033993 21.347799256133563 35.06151630891027 34 22.94894674516737 27.343485053176998 28.47957703020498 21.22799117145065 35 25.02460096402422 21.000328012853657 20.294822400498134 33.68024862262399 36 18.315904175770413 29.807751110518094 26.878429541171172 24.99791517254032 37 23.06875482985028 25.589172240105405 31.606540242729515 19.735532687314798 38 25.40153776873426 20.642849597767288 26.88815873598301 27.067453897515442 39 20.089675378465678 31.265184493331333 29.921443701319276 18.72369642688371 40 26.870924162316328 19.1464994357067 26.026152075654217 27.956424326322754 41 17.374674071973804 21.876789476902893 29.567023033173772 31.18151341794953 42 17.363554992188845 18.12437802647453 32.28702792556888 32.225039055767745 43 22.416064846473304 21.453430514090655 21.00060598984828 35.12989864958776 44 25.061571904309197 17.423320046032988 31.88813093828355 25.62697711137426 45 18.289774338275762 15.864147083187397 29.813588627405196 36.032489951131645 46 29.498640692496288 27.2667634026608 22.891961461269467 20.34263444357345 47 15.748786630418465 19.39667873086823 44.52607702186567 20.32845761684763 48 21.636339376553195 23.673632770151944 27.73876833953222 26.951259513762643 49 18.736761345631038 15.948930066547693 39.26675228358101 26.04755630424026 50 24.151197246915846 16.666944643661292 28.56297012859216 30.618887980830706 51 19.76249645579332 17.107816157134835 26.33859821761151 36.791089169460335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 48.0 1 143.5 2 239.0 3 847.0 4 1455.0 5 1058.0 6 661.0 7 697.5 8 734.0 9 780.0 10 826.0 11 870.0 12 914.0 13 915.0 14 916.0 15 832.0 16 748.0 17 704.0 18 660.0 19 653.5 20 647.0 21 756.0 22 865.0 23 970.5 24 1076.0 25 1156.0 26 1710.0 27 2184.0 28 2487.5 29 2791.0 30 3299.0 31 3807.0 32 4384.0 33 4961.0 34 5760.0 35 6559.0 36 7155.0 37 7751.0 38 8077.0 39 8403.0 40 9095.5 41 9788.0 42 11340.0 43 12892.0 44 15089.5 45 17287.0 46 62496.0 47 107705.0 48 77491.0 49 47277.0 50 42357.0 51 37437.0 52 28526.0 53 19615.0 54 16993.5 55 14372.0 56 13104.0 57 11836.0 58 10684.5 59 9533.0 60 8925.5 61 8318.0 62 6744.5 63 5171.0 64 4429.0 65 3687.0 66 3217.5 67 2748.0 68 2312.0 69 1876.0 70 1557.0 71 1238.0 72 935.5 73 633.0 74 543.5 75 308.5 76 163.0 77 155.5 78 148.0 79 106.0 80 64.0 81 39.0 82 14.0 83 7.5 84 1.0 85 1.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 359742.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.7033040345581 #Duplication Level Percentage of deduplicated Percentage of total 1 74.94456762749445 20.012675750954852 2 10.027794260016865 5.355504778424538 3 3.6934095333270878 2.958787130777057 4 1.835253947930004 1.9602937660879185 5 1.1305081040567129 1.5094150808079123 6 0.7880245255717603 1.262571509581867 7 0.6672704371089805 1.247282774877551 8 0.5673360190708181 1.2119796965603127 9 0.5236147111791221 1.258401854662508 >10 5.627556915774024 27.404362014999638 >50 0.10513933564431675 1.9038644361792616 >100 0.06870491240123669 3.8041151714284127 >500 0.005204917606154294 1.1169115643989302 >1k 0.010409835212308588 7.112319384447743 >5k 0.002081967042461718 4.044287294783484 >10k+ 0.0031229505636925763 17.837227791028017 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC 25867 7.190430919937066 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCG 21896 6.08658427428546 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTC 16405 4.5602125968054885 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTAGTCCT 7606 2.1142930211095727 No Hit GCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 6943 1.9299942736739109 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTA 4587 1.2750804743399438 No Hit GAACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCT 4359 1.2117017195656887 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTC 3813 1.0599262805010259 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCT 3482 0.9679158952805066 No Hit CTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGCT 1985 0.5517843343284909 TruSeq Adapter, Index 20 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 1793 0.4984127513606974 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGT 1633 0.45393643222086943 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATG 1440 0.4002868722584519 No Hit TCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 1435 0.3988969872853323 TruSeq Adapter, Index 22 (95% over 22bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTAT 1059 0.2943776373067365 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAGTAGTCC 901 0.2504572721561564 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTT 860 0.23906021537657543 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 842 0.23405662947334477 No Hit TGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGCTT 813 0.22599529662925094 TruSeq Adapter, Index 22 (95% over 24bp) CGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 602 0.16734215076360281 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC 498 0.1384325433227146 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATGAATGAT 450 0.1250896475807662 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGC 441 0.1225878546291509 No Hit GTGCTTGGGAGGCAGAGGCAGGCAGATTTCTGAGCTCGAGGTCAGCCTGGT 404 0.11230270582806567 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCAGTAGTCCTCG 399 0.11091282085494605 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.779769946239249E-4 0.0 0.0 0.6237803759360875 0.0 2 2.779769946239249E-4 0.0 0.0 3.6634588121487064 0.0 3 2.779769946239249E-4 0.0 0.0 4.408993111730073 0.0 4 2.779769946239249E-4 0.0 0.0 6.620300103963396 0.0 5 2.779769946239249E-4 0.0 0.0 12.797226901501631 0.0 6 2.779769946239249E-4 0.0 0.0 13.672298480577748 0.0 7 2.779769946239249E-4 0.0 0.0 15.312918702848153 0.0 8 2.779769946239249E-4 0.0 0.0 17.29294883555437 0.0 9 2.779769946239249E-4 0.0 0.0 17.678502927097753 0.0 10 2.779769946239249E-4 0.0 0.0 25.001250896475806 0.0 11 2.779769946239249E-4 0.0 0.0 26.452290808412695 0.0 12 2.779769946239249E-4 0.0 0.0 35.48543122571176 0.0 13 2.779769946239249E-4 0.0 0.0 36.33326105931473 0.0 14 2.779769946239249E-4 0.0 0.0 36.76801707890655 0.0 15 2.779769946239249E-4 0.0 0.0 38.42170221992428 0.0 16 2.779769946239249E-4 0.0 0.0 39.349867404973565 0.0 17 2.779769946239249E-4 0.0 0.0 40.03674855868928 0.0 18 2.779769946239249E-4 0.0 0.0 40.64607413090493 0.0 19 2.779769946239249E-4 0.0 0.0 43.5039556126335 0.0 20 2.779769946239249E-4 0.0 0.0 44.305363288134274 0.0 21 2.779769946239249E-4 0.0 0.0 44.93108950303273 0.0 22 2.779769946239249E-4 0.0 0.0 45.6999738701625 0.0 23 2.779769946239249E-4 0.0 0.0 46.282613650894255 0.0 24 2.779769946239249E-4 0.0 0.0 46.75128286383019 0.0 25 5.559539892478499E-4 0.0 0.0 47.17769957358329 0.0 26 5.559539892478499E-4 0.0 0.0 47.579654307809484 0.0 27 5.559539892478499E-4 0.0 0.0 48.0608324855035 0.0 28 5.559539892478499E-4 0.0 0.0 48.45139016295011 0.0 29 5.559539892478499E-4 0.0 0.0 48.866687792918256 0.0 30 5.559539892478499E-4 0.0 0.0 49.322292087106874 0.0 31 5.559539892478499E-4 0.0 0.0 49.71396167253198 0.0 32 5.559539892478499E-4 0.0 0.0 50.10702114293021 0.0 33 5.559539892478499E-4 0.0 0.0 50.46116383408109 0.0 34 5.559539892478499E-4 0.0 0.0 50.84421613267286 0.0 35 5.559539892478499E-4 0.0 0.0 51.25312029176465 0.0 36 5.559539892478499E-4 0.0 0.0 51.631446981447816 0.0 37 5.559539892478499E-4 0.0 0.0 52.01338737206109 0.0 38 5.559539892478499E-4 0.0 0.0 52.394771808685114 0.0 39 8.339309838717747E-4 0.0 0.0 52.97824552040073 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTG 60 0.0 45.000004 1 TACGGAG 30 2.1613287E-6 45.000004 29 GCGATAC 30 2.1613287E-6 45.000004 33 ACACGCG 35 1.2088094E-7 45.0 36 CATATAA 20 7.026817E-4 45.0 19 GGGTCTA 20 7.026817E-4 45.0 8 GCGAACC 25 3.8854447E-5 45.0 33 CGTTGAT 20 7.026817E-4 45.0 25 TGGCGAA 20 7.026817E-4 45.0 34 ATTAAGT 20 7.026817E-4 45.0 28 TTCGTAC 25 3.8854447E-5 45.0 33 CATTCTA 25 3.8854447E-5 45.0 45 CCTAAGG 20 7.026817E-4 45.0 32 TCGATGA 20 7.026817E-4 45.0 19 ATACTAT 25 3.8854447E-5 45.0 45 AGAGTTA 25 3.8854447E-5 45.0 26 TACGCAG 20 7.026817E-4 45.0 41 TCTACGC 20 7.026817E-4 45.0 39 ACGGCCT 185 0.0 45.0 8 CTACGCA 20 7.026817E-4 45.0 40 >>END_MODULE