##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933816.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 421609 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.54935259920922 28.0 16.0 31.0 16.0 33.0 2 25.361372741094236 28.0 16.0 31.0 16.0 34.0 3 26.427633186198587 30.0 16.0 33.0 16.0 34.0 4 30.9083463588301 33.0 28.0 35.0 19.0 37.0 5 33.161758880858805 35.0 32.0 35.0 28.0 37.0 6 31.268480985937206 35.0 28.0 36.0 17.0 37.0 7 33.017981115203895 35.0 32.0 35.0 28.0 37.0 8 31.791681392000644 35.0 30.0 36.0 17.0 37.0 9 34.053931486282316 35.0 32.0 38.0 28.0 39.0 10 33.368720781577245 35.0 32.0 37.0 27.0 39.0 11 34.00505444618118 35.0 32.0 38.0 27.0 39.0 12 34.23498312417429 35.0 32.0 39.0 27.0 39.0 13 34.37460063708318 35.0 33.0 37.0 27.0 39.0 14 34.34535553083544 36.0 32.0 38.0 27.0 40.0 15 34.92841471600464 37.0 33.0 39.0 27.0 40.0 16 34.54114119954745 36.0 32.0 39.0 27.0 40.0 17 33.976774689344865 36.0 32.0 38.0 27.0 40.0 18 34.232862676081396 36.0 32.0 38.0 27.0 40.0 19 34.06092374688396 36.0 32.0 39.0 27.0 40.0 20 33.82168075159686 35.0 31.0 39.0 25.0 40.0 21 33.7926040478263 36.0 32.0 39.0 25.0 40.0 22 35.09764971810374 37.0 33.0 39.0 27.0 40.0 23 35.342739362774516 37.0 33.0 39.0 29.0 40.0 24 35.659722634004495 37.0 34.0 39.0 30.0 40.0 25 33.7774573123439 36.0 32.0 39.0 24.0 40.0 26 34.725487359140814 37.0 33.0 39.0 27.0 40.0 27 34.86810765424837 37.0 33.0 39.0 27.0 40.0 28 34.938922081834114 37.0 33.0 39.0 27.0 40.0 29 35.42676508328807 37.0 34.0 40.0 27.0 40.0 30 33.78765396374366 36.0 32.0 39.0 24.0 40.0 31 34.58910744315231 37.0 33.0 39.0 25.0 40.0 32 34.79557836763447 37.0 33.0 39.0 27.0 40.0 33 35.121505945081815 37.0 34.0 39.0 27.0 40.0 34 35.2941920120301 38.0 34.0 40.0 27.0 40.0 35 35.52994599261401 38.0 34.0 40.0 29.0 41.0 36 35.49388888757119 38.0 34.0 40.0 29.0 41.0 37 35.36660270535022 38.0 34.0 40.0 28.0 41.0 38 35.24937560630821 37.0 34.0 40.0 29.0 41.0 39 35.266673624139905 37.0 34.0 40.0 29.0 40.0 40 34.89851971850696 37.0 33.0 40.0 27.0 40.0 41 34.21901097936714 37.0 33.0 39.0 25.0 40.0 42 35.22492641286121 37.0 34.0 40.0 29.0 40.0 43 35.3017464048443 38.0 34.0 40.0 29.0 40.0 44 35.93988505937966 38.0 35.0 40.0 30.0 41.0 45 36.24062342122678 38.0 35.0 40.0 31.0 41.0 46 35.96884554172231 38.0 35.0 40.0 30.0 41.0 47 35.23168385874116 38.0 34.0 40.0 26.0 41.0 48 35.65237933725324 38.0 35.0 40.0 29.0 41.0 49 35.9595525712212 38.0 35.0 40.0 30.0 41.0 50 35.58917385539682 38.0 35.0 40.0 28.0 41.0 51 35.25415965977956 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 5.0 11 8.0 12 10.0 13 7.0 14 17.0 15 34.0 16 108.0 17 293.0 18 659.0 19 1094.0 20 1682.0 21 2109.0 22 2525.0 23 2726.0 24 3070.0 25 3829.0 26 5206.0 27 7043.0 28 9430.0 29 12489.0 30 17175.0 31 23437.0 32 31604.0 33 41133.0 34 50028.0 35 58390.0 36 61150.0 37 53909.0 38 29469.0 39 2967.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.32603431141176 2.977166047214362 34.85148561819126 12.845314023182617 2 14.63227777395644 35.388476052456184 33.387807186279225 16.591438987308145 3 13.643446890365244 35.68851708573584 35.85502207021197 14.813013953686946 4 14.883221183608509 3.0862718774978712 62.96592340296341 19.06458353593021 5 38.19700243590625 3.768894876532522 36.218629108961146 21.815473578600077 6 15.822005697221833 29.562936275079515 38.47593386289192 16.139124164806727 7 55.13829163988435 1.7418982991349803 37.89672421603903 5.22308584494164 8 49.96975871008446 25.170477859817986 14.587923882080316 10.271839548017239 9 46.890602430213775 3.9906643359131326 14.431380734282238 34.68735249959085 10 41.16444383303013 18.883135796436985 22.118835224105748 17.83358514642714 11 34.24974324551896 19.114867092495654 27.405012701341764 19.230376960643632 12 23.99687862450754 14.667618575504793 29.943857934721507 31.391644865266162 13 23.52345419571214 19.84136961023128 41.68032466100107 14.954851533055507 14 19.62861324117844 30.092099551954536 23.893939645500925 26.385347561366103 15 11.471292121373121 22.199478663880516 44.90606225199178 21.42316696275459 16 12.87140454781563 23.64750278101274 24.528176580670717 38.95291609050091 17 13.871620387610323 28.191286239145747 35.78220578782711 22.15488758541682 18 13.40293969056638 23.248080567540068 32.6394835024869 30.709496239406654 19 14.19419414670939 27.932515672103776 28.26528845446848 29.608001726718356 20 17.950755320688124 24.709624320163943 43.08328332649445 14.256337032653477 21 20.444772289016598 35.63941946210826 26.285966381173075 17.629841867702066 22 14.817520498850831 20.994570799010457 34.97553420349186 29.21237449864685 23 17.625572509125753 33.31143310508077 28.32245042207353 20.74054396371994 24 22.15725945129255 21.921021610069992 24.278893477131653 31.6428254615058 25 13.36712451584288 39.11728639568889 20.76900635422868 26.746582734239542 26 15.286438382482348 20.68883728762906 31.234627344292935 32.79009698559566 27 21.018052271180167 28.150727332670794 24.984760761748444 25.846459634400592 28 14.814437073212384 25.839344036773408 34.697551522856486 24.648667367157724 29 20.33946144413426 20.50051113709622 26.53809572376301 32.62193169500651 30 16.936071099051492 28.66328754841571 36.71648375627655 17.68415759625625 31 27.63484650469985 23.97932681702715 19.66134499026349 28.724481688009508 32 22.96416822221537 35.08985813870197 21.155857678559993 20.790115960522666 33 20.08875522106976 20.236996838302787 26.561577195932724 33.112670744694725 34 24.868064960662604 26.767455153945956 21.2623544563802 27.10212542901124 35 17.224727176127644 20.06788280136335 28.87035143936681 33.837038583142196 36 28.035929024285533 20.82640550842131 22.015421871923987 29.12224359536917 37 15.89411041984398 26.84714984737043 38.40216883415676 18.856570898628824 38 28.01221036552825 21.243616715961945 25.74589252126971 24.998280397240098 39 21.694271232350353 36.035521063354906 24.410532033234585 17.859675671060153 40 16.31677691889879 19.670358080591257 35.800706341657786 28.21215865885216 41 24.480502076568573 31.106546587003596 21.15063957363339 23.26231176279444 42 19.140720430541094 18.097336631808144 31.206402140371765 31.555540797278997 43 30.7151887175084 17.46262532346321 22.526796154731045 29.295389804297344 44 21.14803052117009 18.58285757656976 33.98883799918882 26.280273903071325 45 20.33898707095911 15.554222039852089 27.468578706811286 36.63821218237751 46 30.791799985294432 26.09052463301305 23.735736191589837 19.381939190102678 47 13.444210156804054 17.957633731727736 47.7743596555102 20.823796455958007 48 21.517567224608584 25.75277093230932 25.08793692734263 27.641724915739463 49 18.225891762272628 15.106888135689703 40.30725150554186 26.359968596495804 50 27.331010486019036 15.098823791712226 29.67014461266244 27.900021109606293 51 19.568130661347364 15.67400126657638 27.071765545801917 37.68610252627435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 48.0 1 184.5 2 321.0 3 1204.0 4 2087.0 5 1496.0 6 905.0 7 934.5 8 964.0 9 1156.5 10 1349.0 11 1340.0 12 1331.0 13 1272.5 14 1214.0 15 1150.5 16 1087.0 17 1122.0 18 1157.0 19 1092.5 20 1028.0 21 1135.0 22 1242.0 23 1498.5 24 1755.0 25 1691.0 26 2103.5 27 2580.0 28 2829.5 29 3079.0 30 3463.0 31 3847.0 32 4605.0 33 5363.0 34 5736.5 35 6110.0 36 6592.0 37 7074.0 38 7981.5 39 8889.0 40 10168.5 41 11448.0 42 12943.5 43 14439.0 44 17137.0 45 19835.0 46 74601.5 47 129368.0 48 93281.0 49 57194.0 50 51811.5 51 46429.0 52 34759.5 53 23090.0 54 19231.5 55 15373.0 56 13691.0 57 12009.0 58 11499.5 59 10990.0 60 9964.5 61 8939.0 62 8058.5 63 7178.0 64 5882.5 65 4587.0 66 3658.0 67 2729.0 68 2230.5 69 1732.0 70 1484.5 71 1237.0 72 1009.5 73 782.0 74 670.0 75 421.0 76 284.0 77 243.5 78 203.0 79 144.5 80 86.0 81 58.0 82 30.0 83 30.5 84 31.0 85 16.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 421609.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.74900116871387 #Duplication Level Percentage of deduplicated Percentage of total 1 70.9599539797259 17.56187983976119 2 11.972851326409993 5.926322229403167 3 4.4065150949718 3.271705417062371 4 2.3385710887740188 2.315091944367546 5 1.3614089253555604 1.6846755542361127 6 0.9526891968569281 1.4146863627859918 7 0.7693133919132309 1.3327816624897448 8 0.6447465962625917 1.2765467411541738 9 0.5969134973237327 1.3295711558597532 >10 5.755879885454604 24.659830962423605 >50 0.13353322426248837 2.2610846305321113 >100 0.08570042751174627 4.3154950769034555 >500 0.002989549796921381 0.4476296470785102 >1k 0.011958199187685524 6.345735988611607 >5k 0.003986066395895175 7.437557722835611 >10k+ 0.002989549796921381 18.419405064495063 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGC 30494 7.232767801446364 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCG 24581 5.830283509128126 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTC 19610 4.651228982303509 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGATACGT 9431 2.23690670739951 No Hit GCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC 8953 2.1235315185396897 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGATACGTCGTA 5960 1.4136320619341618 No Hit GAACTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCT 5813 1.3787656335609533 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTC 4594 1.0896351833096543 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCT 4194 0.9947605482805159 No Hit CTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGCT 2494 0.5915433494066777 No Hit CCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC 2380 0.5645040784233734 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGATACGTCGT 2040 0.48386063864860573 No Hit TCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGC 1939 0.4599047933037482 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATG 1863 0.441878612648212 No Hit TGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTGCTT 1445 0.34273461904276237 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTAT 1331 0.3156953480594579 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1197 0.28391234532469656 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTT 1182 0.28035454651110386 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCTGATACG 1071 0.254026835290518 No Hit CGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTG 702 0.16650498447613785 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCTGATACGTCG 562 0.13329886221593942 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGC 551 0.1306898097526381 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGC 448 0.10625959123263498 No Hit TCCTGTCTCTTATACACATCTGACGCCTGATACGTCGTATGCCGTCTTCTG 442 0.1048364717071979 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7023094858031969 0.0 2 0.0 0.0 0.0 4.078897746490232 0.0 3 0.0 0.0 0.0 4.894582421153249 0.0 4 0.0 0.0 0.0 7.462838791392024 0.0 5 0.0 0.0 0.0 14.043817850188207 0.0 6 0.0 0.0 0.0 15.096214739248925 0.0 7 0.0 0.0 0.0 16.881280997322165 0.0 8 0.0 0.0 0.0 19.115815838845943 0.0 9 0.0 0.0 0.0 19.56860503452251 0.0 10 0.0 0.0 0.0 26.756781757505177 0.0 11 0.0 0.0 0.0 28.490852899250253 0.0 12 0.0 0.0 0.0 37.806830499348926 0.0 13 0.0 0.0 0.0 38.75842308869118 0.0 14 0.0 0.0 0.0 39.25343149695571 0.0 15 0.0 0.0 0.0 41.12246180702974 0.0 16 0.0 0.0 0.0 42.163236553299384 0.0 17 0.0 0.0 0.0 43.03679475533018 0.0 18 0.0 0.0 0.0 43.737681121607935 0.0 19 0.0 0.0 0.0 46.89249992291436 0.0 20 0.0 0.0 0.0 47.720043926956016 0.0 21 0.0 0.0 0.0 48.4294690103864 0.0 22 0.0 0.0 0.0 49.27907136707233 0.0 23 0.0 0.0 0.0 49.95932250023126 0.0 24 0.0 0.0 0.0 50.52691000429308 0.0 25 0.0 0.0 0.0 51.011719389291976 0.0 26 0.0 0.0 0.0 51.480874459511064 0.0 27 0.0 0.0 0.0 51.96022855299579 0.0 28 0.0 0.0 0.0 52.38858753015234 0.0 29 0.0 0.0 0.0 52.83900485995318 0.0 30 0.0 0.0 0.0 53.309820236285276 0.0 31 0.0 0.0 0.0 53.79889897986049 0.0 32 0.0 0.0 0.0 54.232950435118795 0.0 33 0.0 0.0 0.0 54.67696372705516 0.0 34 0.0 0.0 0.0 55.10389958468628 0.0 35 0.0 0.0 0.0 55.50948864943585 0.0 36 0.0 0.0 0.0 55.93428982777882 0.0 37 0.0 0.0 0.0 56.35363571460761 0.0 38 0.0 0.0 0.0 56.77535346731213 0.0 39 0.0 0.0 0.0 57.21604614702248 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCATGGG 65 0.0 45.000004 3 GCAAGGC 20 7.0281996E-4 45.0 15 GTCGAAT 25 3.8865895E-5 45.0 43 CCGATCA 20 7.0281996E-4 45.0 40 GCGCGTT 20 7.0281996E-4 45.0 32 TTAGCGG 35 1.2094824E-7 45.0 2 GCAACTA 20 7.0281996E-4 45.0 9 TTTGTCG 40 6.7975634E-9 45.0 1 GTTTACG 35 1.2094824E-7 45.0 1 TAGGTAG 20 7.0281996E-4 45.0 29 TTGTCTA 20 7.0281996E-4 45.0 43 GGGTACG 20 7.0281996E-4 45.0 7 TTCGTTG 45 3.8380676E-10 45.0 1 GTGATCC 25 3.8865895E-5 45.0 14 ATAGATC 20 7.0281996E-4 45.0 32 ATTCGGC 35 1.2094824E-7 45.0 28 CTCTTCG 35 1.2094824E-7 45.0 1 CGATTGA 25 3.8865895E-5 45.0 20 GCGTTAG 25 3.8865895E-5 45.0 43 TCGGCGA 35 1.2094824E-7 45.0 30 >>END_MODULE