##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933814.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 257569 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 23.74058601772729 25.0 16.0 31.0 16.0 33.0 2 24.363184234127555 27.0 16.0 31.0 16.0 34.0 3 25.613866575558394 30.0 16.0 33.0 16.0 34.0 4 30.318617535495342 32.0 28.0 35.0 19.0 37.0 5 32.90920102962701 35.0 32.0 35.0 28.0 37.0 6 30.758503546622457 35.0 28.0 35.0 17.0 37.0 7 32.938478621262654 33.0 32.0 35.0 28.0 37.0 8 31.041010370036766 35.0 28.0 35.0 17.0 37.0 9 33.95710275693115 35.0 32.0 37.0 28.0 39.0 10 33.358560230462516 34.0 32.0 37.0 27.0 39.0 11 34.08009892494827 35.0 32.0 37.0 27.0 39.0 12 34.3043029246532 35.0 33.0 39.0 27.0 39.0 13 34.44120992821341 35.0 33.0 37.0 27.0 39.0 14 34.2051411466442 36.0 32.0 38.0 25.0 40.0 15 34.857742973727426 36.0 32.0 39.0 27.0 40.0 16 34.55835911930395 36.0 32.0 38.0 27.0 40.0 17 33.89412545764436 36.0 32.0 38.0 27.0 40.0 18 34.24918371387861 36.0 32.0 38.0 27.0 40.0 19 33.92264985304909 36.0 32.0 39.0 27.0 40.0 20 33.36426743901634 35.0 31.0 38.0 25.0 40.0 21 33.5876056513012 36.0 32.0 38.0 25.0 40.0 22 34.94895736676386 37.0 33.0 39.0 27.0 40.0 23 35.088679150053 37.0 33.0 39.0 27.0 40.0 24 35.48367621879962 37.0 34.0 39.0 29.0 40.0 25 33.635538438243735 36.0 32.0 39.0 24.0 40.0 26 34.657101592194714 37.0 33.0 39.0 27.0 40.0 27 34.31052261724043 36.0 33.0 39.0 27.0 40.0 28 34.467664975210525 37.0 33.0 39.0 25.0 40.0 29 34.948072167069796 37.0 33.0 39.0 27.0 40.0 30 33.31170676595398 36.0 31.0 39.0 23.0 40.0 31 34.08516552846034 36.0 32.0 39.0 25.0 40.0 32 34.01996358257399 36.0 32.0 39.0 25.0 40.0 33 34.5582193509312 37.0 33.0 39.0 25.0 40.0 34 34.58119960088365 37.0 33.0 39.0 25.0 40.0 35 34.828570208371346 37.0 33.0 40.0 25.0 40.0 36 34.477184754376495 37.0 33.0 40.0 25.0 40.0 37 34.66854318648595 37.0 33.0 40.0 25.0 40.0 38 33.95674945354449 37.0 32.0 39.0 23.0 40.0 39 34.21314676843875 37.0 33.0 39.0 24.0 40.0 40 34.00035330338667 37.0 32.0 39.0 24.0 40.0 41 33.43713335067496 36.0 31.0 39.0 23.0 40.0 42 33.95369784407285 37.0 33.0 39.0 23.0 40.0 43 34.365420528091505 37.0 33.0 39.0 25.0 40.0 44 35.00127732762871 37.0 34.0 40.0 27.0 40.0 45 34.91722218124075 37.0 34.0 40.0 26.0 40.0 46 34.863050289437005 37.0 34.0 40.0 26.0 40.0 47 33.76463782520412 37.0 32.0 40.0 22.0 41.0 48 34.375188784364575 37.0 33.0 40.0 26.0 40.0 49 34.61788491627486 37.0 34.0 40.0 26.0 41.0 50 34.39121555777287 37.0 33.0 40.0 26.0 41.0 51 33.93645974476742 36.0 32.0 40.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 0.0 10 4.0 11 11.0 12 1.0 13 5.0 14 14.0 15 35.0 16 98.0 17 355.0 18 754.0 19 1334.0 20 1768.0 21 2005.0 22 2098.0 23 2132.0 24 2369.0 25 2928.0 26 4021.0 27 5226.0 28 6839.0 29 9069.0 30 12092.0 31 16184.0 32 21403.0 33 26298.0 34 30371.0 35 33991.0 36 33208.0 37 27501.0 38 14135.0 39 1319.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 55.143281994339375 3.0818926190651825 29.714367800472886 12.060457586122554 2 12.981764109811353 42.49307952432164 28.9902899805489 15.534866385318107 3 11.84459309932484 42.23023733446183 32.386661438294205 13.53850812791912 4 13.513660417208593 2.3748976002546893 67.41882757629995 16.692614406236775 5 42.72214435743432 3.03685614340235 33.236530793690235 21.004468705473098 6 13.920153434613638 34.72156975412414 35.97676739048566 15.381509420776569 7 48.49729587023283 1.1096055814170183 44.671524911771215 5.7215736365789365 8 42.14831753821306 29.808323206597066 16.023667444451778 12.019691810738093 9 39.77147871055911 3.1634241698341024 16.215072466018814 40.850024653587965 10 42.82852361891376 15.553502168351004 23.15690164577259 18.46107256696264 11 36.426743901634126 17.493953076651305 27.174465871281093 18.904837150433476 12 21.704475305646255 13.623145642526858 30.888422131545333 33.783956920281554 13 23.104100260512716 20.971079594205825 42.99158672045161 12.93323342482985 14 18.361681724120526 33.801816212354744 22.173864090787323 25.6626379727374 15 8.448221641579538 21.830266841118302 46.69583684371955 23.025674673582614 16 9.320609234806984 24.04404256723441 23.81497773412173 42.82037046383687 17 11.400828515854004 30.018364011197 35.72207835570274 22.858729117246252 18 10.90736851096211 23.07498184952382 32.88827459826299 33.12937504125108 19 11.359674494989692 27.32859932678234 28.07519538453774 33.236530793690235 20 17.069600767173068 23.936110323835553 44.61406458075312 14.380224328238258 21 19.114877955033407 38.074069472646165 25.72436900403387 17.086683568286556 22 12.053469167485217 20.666695138001856 36.519922816798605 30.759912877714324 23 17.1534617908211 34.8310549794424 27.20863147350807 20.80685175622843 24 21.844631923872825 22.907259802227752 22.58462780847074 32.66348046542868 25 12.24021524329403 42.0097139019059 19.49497027980852 26.25510057499156 26 18.848929801334787 19.616491115002194 31.699078693476313 29.83550039018671 27 26.73303076068937 28.382297559100667 20.181388288186856 24.70328339202311 28 13.995861303184778 26.561814504074636 37.861310949687265 21.581013243053317 29 31.125640119734904 18.947155907737347 23.983476272377498 25.943727700150248 30 26.947730511047524 30.704005528615635 27.583676607045106 14.76458735329174 31 28.678917105707598 21.49016380076795 22.764385465642217 27.06653362788224 32 30.439610356836422 41.00260512716981 14.895037834522013 13.66274668147176 33 29.083080650233526 21.359325074057825 16.973704133649626 32.58389014205902 34 39.482624073549225 24.137997973358598 19.76130667898699 16.61807127410519 35 27.465261735690245 29.39523001603454 17.661286878467518 25.478221369807702 36 30.91288159677601 27.373247556965318 24.765402668799428 16.948468177459244 37 26.7489488253633 27.28084513276054 30.70788798341415 15.262318058462004 38 27.000143650827546 24.62369306865345 25.56790607565351 22.80825720486549 39 31.164076422240257 33.00474824221859 21.960329076868724 13.870846258672435 40 30.780878133626327 25.876561232135852 23.466333293214632 19.87622734102318 41 28.705317798337532 31.263855510562216 18.770115968924834 21.260710722175418 42 19.486428879251775 28.599326782337936 31.126804856174463 20.78743948223583 43 29.002713835904164 27.91912070163723 18.47466115875746 24.603504303701143 44 28.08956046729226 16.669707922925507 30.33128986795771 24.90944174182452 45 19.95931187371151 15.748013153756856 29.185189211434604 35.107485761097024 46 33.36581653848095 28.889346155787383 22.30353808105789 15.441299224673777 47 16.917796784550937 18.23627843412833 45.995053752586685 18.850871028734048 48 25.81405370987968 23.583971673609792 23.13748937177999 27.46448524473054 49 19.888651196378447 17.120849170513534 41.49567688658185 21.494822746526175 50 26.54977889419922 18.407882936222915 28.42578105284409 26.61655711673377 51 21.603143235404882 15.33297873579507 25.95343383714655 37.1104441916535 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 46.0 1 94.5 2 143.0 3 623.0 4 1103.0 5 787.0 6 471.0 7 583.0 8 695.0 9 869.0 10 1043.0 11 1077.0 12 1111.0 13 1082.0 14 1053.0 15 914.5 16 776.0 17 767.5 18 759.0 19 715.5 20 672.0 21 719.0 22 766.0 23 869.0 24 972.0 25 1031.5 26 1240.5 27 1390.0 28 1663.0 29 1936.0 30 1855.5 31 1775.0 32 1939.5 33 2104.0 34 2404.5 35 2705.0 36 3047.0 37 3389.0 38 3528.5 39 3668.0 40 4445.5 41 5223.0 42 6330.5 43 7438.0 44 9150.5 45 10863.0 46 49910.0 47 88957.0 48 63267.0 49 37577.0 50 33863.0 51 30149.0 52 21808.0 53 13467.0 54 11198.5 55 8930.0 56 8198.5 57 7467.0 58 6601.5 59 5736.0 60 5160.5 61 4585.0 62 3997.0 63 3409.0 64 2793.0 65 2177.0 66 1793.5 67 1410.0 68 1186.0 69 962.0 70 777.5 71 593.0 72 504.5 73 416.0 74 321.5 75 211.0 76 195.0 77 130.5 78 66.0 79 52.5 80 39.0 81 20.0 82 1.0 83 7.0 84 13.0 85 7.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 257569.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.91150332532253 #Duplication Level Percentage of deduplicated Percentage of total 1 76.24662870842074 19.756647733228768 2 9.955049445609829 5.159005936273387 3 3.491159724303267 2.7138359041654856 4 1.7845370092897814 1.8496014660149318 5 1.24213365298172 1.6092775139865436 6 0.7836379982019779 1.2183143157755787 7 0.6577764459094996 1.1930783595851984 8 0.5483967635600839 1.1367827650066584 9 0.5124363200479473 1.1950195869844586 >10 4.547497752472281 20.52576202881558 >50 0.11687144141444411 2.0771133172082044 >100 0.08240934971531315 4.1383085697424775 >500 0.010488462691039856 2.0371240327834483 >1k 0.013485166317051244 9.425047268887173 >5k 0.0029967036260113876 5.245584678280383 >10k+ 0.004495055439017081 20.719496523261725 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC 21385 8.302629586635039 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG 17440 6.771001168618894 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC 14542 5.645865768007797 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGGAAT 6894 2.676564338099694 No Hit GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 6617 2.5690203401806895 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTA 4512 1.7517636050922276 No Hit GAACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCT 4492 1.7439986954951876 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTC 3461 1.3437176057677749 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCT 3297 1.2800453470720468 No Hit CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT 2247 0.8723875932274459 No Hit CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 2094 0.8129860348100898 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGT 1557 0.6044982121295653 No Hit TCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 1403 0.5447084082323571 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATG 1213 0.470941767060477 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTAT 992 0.3851395160131848 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTT 905 0.35136215926606074 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGTAGGAA 823 0.3195260299181967 No Hit CGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 681 0.26439517177921257 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 646 0.25080657998439254 No Hit TGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCTT 616 0.2391592155888325 Illumina Single End Adapter 1 (95% over 21bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC 584 0.2267353602335685 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGGTAGGAATCG 440 0.17082801113488036 No Hit GAATGCTACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG 418 0.16228661057813634 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC 359 0.1393801272668683 No Hit TTCCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCT 338 0.13122697218997628 No Hit TCCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 308 0.11957960779441625 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCGATGAATGAT 296 0.11492066203619225 No Hit GCACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCT 291 0.11297943463693225 No Hit TGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG 288 0.11181469819737623 No Hit GAATGATACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGT 271 0.10521452503989223 No Hit GACTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC 264 0.10249680668092821 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCC 262 0.10172031572122421 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9772138727874861 0.0 2 0.0 0.0 0.0 5.225784158807931 0.0 3 0.0 0.0 0.0 6.265117308371737 0.0 4 0.0 0.0 0.0 9.475907426747785 0.0 5 0.0 0.0 0.0 17.3475845307471 0.0 6 0.0 0.0 0.0 18.62025321370196 0.0 7 0.0 0.0 0.0 20.762203526045447 0.0 8 0.0 0.0 0.0 23.2951170365999 0.0 9 0.0 0.0 0.0 23.786635814092534 0.0 10 0.0 0.0 0.0 32.0655824264566 0.0 11 0.0 0.0 0.0 33.91634862891109 0.0 12 0.0 0.0 0.0 44.460319370731725 0.0 13 0.0 0.0 0.0 45.48489919206116 0.0 14 0.0 0.0 0.0 46.04474917400774 0.0 15 0.0 0.0 0.0 48.25308946340592 0.0 16 0.0 0.0 0.0 49.383660300734945 0.0 17 0.0 0.0 0.0 50.21217615473912 0.0 18 0.0 0.0 0.0 50.86792277020915 0.0 19 0.0 0.0 0.0 54.56130202004123 0.0 20 0.0 0.0 0.0 55.41544207571563 0.0 21 0.0 0.0 0.0 56.03896431635795 0.0 22 0.0 0.0 0.0 56.71528794226013 0.0 23 0.0 0.0 0.0 57.224277766346106 0.0 24 0.0 0.0 0.0 57.654842003501976 0.0 25 0.0 0.0 0.0 58.056287829668946 0.0 26 0.0 0.0 0.0 58.49073452162333 0.0 27 0.0 0.0 0.0 58.87781526503578 0.0 28 0.0 0.0 0.0 59.189576385356936 0.0 29 0.0 0.0 0.0 59.50910241527513 0.0 30 0.0 0.0 0.0 59.823581253955254 0.0 31 0.0 0.0 0.0 60.17300218582205 0.0 32 0.0 0.0 0.0 60.48748102450217 0.0 33 0.0 0.0 0.0 60.786041798508364 0.0 34 0.0 0.0 0.0 61.08110836319588 0.0 35 0.0 0.0 0.0 61.395587201876005 0.0 36 0.0 0.0 0.0 61.687159557244854 0.0 37 0.0 0.0 0.0 61.9868850676906 0.0 38 3.882454798520008E-4 0.0 0.0 62.27612795018034 0.0 39 3.882454798520008E-4 0.0 0.0 62.55721767759319 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACCC 20 7.023083E-4 45.000004 35 ACTGCGA 20 7.023083E-4 45.000004 30 GATGTGA 20 7.023083E-4 45.000004 10 CAAAATA 20 7.023083E-4 45.000004 37 CGCGGGT 20 7.023083E-4 45.000004 4 GGGTAAT 20 7.023083E-4 45.000004 7 TCCCTTG 20 7.023083E-4 45.000004 1 GAATCTA 20 7.023083E-4 45.000004 9 ATGCTCC 40 6.7793735E-9 45.000004 3 GGTTTCG 20 7.023083E-4 45.000004 1 CGATTTC 20 7.023083E-4 45.000004 10 CGCGATA 20 7.023083E-4 45.000004 43 TACGGGC 20 7.023083E-4 45.000004 29 AGGCGAA 20 7.023083E-4 45.000004 31 TCGGCGA 20 7.023083E-4 45.000004 30 GGGACGG 20 7.023083E-4 45.000004 7 TCTCGTG 20 7.023083E-4 45.000004 1 TAGGGTG 40 6.7793735E-9 45.000004 5 GCGATGT 20 7.023083E-4 45.000004 9 CGTACCT 20 7.023083E-4 45.000004 31 >>END_MODULE