##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933809.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 559018 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.24112103724746 28.0 16.0 31.0 16.0 34.0 2 26.074580782729715 30.0 16.0 33.0 16.0 34.0 3 27.13088666196795 31.0 23.0 33.0 16.0 34.0 4 31.333588542766066 35.0 28.0 35.0 19.0 37.0 5 33.32749929340379 35.0 32.0 35.0 28.0 37.0 6 31.707297439438445 35.0 30.0 37.0 17.0 37.0 7 33.215697884504614 35.0 32.0 35.0 28.0 37.0 8 32.16475676990723 35.0 32.0 37.0 17.0 37.0 9 34.24877374252707 35.0 32.0 39.0 28.0 39.0 10 33.57935880418877 35.0 32.0 37.0 27.0 39.0 11 34.246113720846196 35.0 32.0 39.0 27.0 39.0 12 34.28098200773499 37.0 32.0 39.0 27.0 39.0 13 34.3865349595183 35.0 33.0 38.0 27.0 39.0 14 34.23208912772039 36.0 32.0 39.0 25.0 40.0 15 34.81338346886862 37.0 32.0 39.0 27.0 40.0 16 34.53844777806797 36.0 32.0 39.0 27.0 40.0 17 34.02907240911742 36.0 32.0 38.0 27.0 40.0 18 34.37696460579087 36.0 32.0 39.0 27.0 40.0 19 34.14674482753686 36.0 32.0 39.0 27.0 40.0 20 33.979007831590394 36.0 32.0 39.0 25.0 40.0 21 33.840541807240555 36.0 32.0 39.0 25.0 40.0 22 35.0036277901606 37.0 33.0 39.0 27.0 40.0 23 35.475460539732175 37.0 34.0 39.0 29.0 40.0 24 35.76143165336358 37.0 34.0 39.0 30.0 40.0 25 33.79472575122804 36.0 32.0 39.0 24.0 40.0 26 34.70105434887606 37.0 33.0 39.0 27.0 40.0 27 34.970362313914755 37.0 33.0 39.0 27.0 40.0 28 35.151302820302746 37.0 34.0 39.0 27.0 40.0 29 35.53574303510799 37.0 34.0 40.0 29.0 40.0 30 33.85239115735093 36.0 32.0 39.0 24.0 40.0 31 34.66213073639847 37.0 33.0 39.0 25.0 40.0 32 34.85594918231613 37.0 33.0 39.0 27.0 40.0 33 35.314857482227765 37.0 34.0 39.0 29.0 40.0 34 35.39734856480471 38.0 34.0 40.0 29.0 40.0 35 35.567332357813164 38.0 34.0 40.0 29.0 41.0 36 35.50434154177504 38.0 34.0 40.0 29.0 41.0 37 35.51766848294688 38.0 35.0 40.0 30.0 41.0 38 35.372630219420486 38.0 34.0 40.0 30.0 41.0 39 35.282046374177575 37.0 34.0 40.0 29.0 40.0 40 34.87432605032396 37.0 33.0 40.0 27.0 40.0 41 34.10235806360439 37.0 33.0 39.0 24.0 40.0 42 35.22400530931026 37.0 34.0 40.0 29.0 40.0 43 35.250045615704686 38.0 34.0 40.0 28.0 40.0 44 35.81242106694239 38.0 35.0 40.0 30.0 41.0 45 36.01383318605125 38.0 35.0 40.0 31.0 41.0 46 35.7344146342336 38.0 35.0 40.0 29.0 41.0 47 35.001180641768244 37.0 34.0 40.0 26.0 41.0 48 35.34102300820367 38.0 34.0 40.0 28.0 41.0 49 35.71291443209342 38.0 35.0 40.0 29.0 41.0 50 35.23729826230998 38.0 34.0 40.0 27.0 41.0 51 34.77033834330916 37.0 33.0 40.0 26.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 3.0 11 7.0 12 13.0 13 12.0 14 19.0 15 35.0 16 108.0 17 298.0 18 783.0 19 1485.0 20 2199.0 21 2736.0 22 3083.0 23 3390.0 24 3997.0 25 5199.0 26 7078.0 27 9464.0 28 12388.0 29 16571.0 30 22790.0 31 31221.0 32 42302.0 33 53026.0 34 62621.0 35 73410.0 36 79879.0 37 75499.0 38 44575.0 39 4823.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.5205699995349 3.0600088011477267 38.70036385232676 13.719057346990615 2 15.748508992554802 30.864122443284476 36.50759009548887 16.879778468671848 3 14.366621468360592 30.77235437857099 39.20142106336469 15.65960308970373 4 15.096293858158413 2.80187757818174 63.25019945690479 18.85162910675506 5 35.62425539070298 3.4546293679273297 38.885509947801324 22.035605293568363 6 15.755843282327223 25.816521113810285 42.20454439749704 16.223091206365446 7 59.09756036478253 1.2323395668833563 34.32125620284141 5.348843865492704 8 55.052252342500594 21.291622094458496 13.964129956459361 9.691995606581541 9 51.695294248127965 3.7869979141995427 14.36268599579978 30.155021841872713 10 39.21537410244393 22.829139669921183 21.092701845021093 16.8627843826138 11 31.886987538862794 18.48151580092233 30.20081643167125 19.430680228543626 12 23.15274284548977 15.572486038016663 31.973389050084254 29.30138206640931 13 24.23249340808346 19.620477337044605 41.763234815336894 14.383794439535041 14 19.378803544787466 29.095127527199484 27.482835973081365 24.043232954931685 15 11.186938524340897 22.190698689487636 45.40301027873879 21.219352507432674 16 14.81973746820317 24.629797251609073 24.791867167067966 35.758598113119795 17 16.107173650937895 27.581222787101666 34.2516698925616 22.059933669398838 18 15.240833032210055 23.081725454278754 33.64757485447696 28.029866659034237 19 15.728652744634342 26.782500742373234 29.00443277318441 28.48441373980802 20 17.24756626799137 27.216833804993755 40.897967507307456 14.637632419707417 21 19.799720223677948 33.6624223191382 29.369358410641517 17.16849904654233 22 14.581820263390446 20.700406784754694 36.92099359949054 27.796779352364325 23 16.60805197685942 31.03138002711898 30.800975997195078 21.559591998826512 24 21.44904099689098 23.521961725740496 25.194179793852793 29.834817483515735 25 15.251208368961287 36.93637771950098 22.369583805888183 25.44283010564955 26 18.6024421396091 20.500592109735287 31.775363226228855 29.121602524426766 27 20.612574192602025 26.2453087378224 28.84826606656673 24.293851003008847 28 13.443574267733776 24.878984218755033 37.47321195381902 24.204229559692177 29 24.691870387000062 21.693755836126925 27.977811090161676 25.63656268671134 30 16.78228608023355 28.423950570464633 35.16380510108798 19.629958248213832 31 21.881585208347495 24.309056237902894 27.74239827697856 26.066960276771052 32 26.825075400076564 33.27012725887181 21.22275132464429 18.68204601640734 33 17.284595487086282 20.31186831193271 23.472589433613944 38.93094676736706 34 28.80336590235019 26.384481358382022 25.028532176065887 19.7836205632019 35 22.04115073217678 21.86423335205664 27.974054502717266 28.120561413049312 36 24.38901788493394 21.20307396184023 28.199628634498353 26.208279518727483 37 15.736702574872366 27.038843114175215 38.742938510030086 18.48151580092233 38 20.307396184022696 21.871209871596264 28.05419503486471 29.767198909516328 39 20.254803959800938 33.778697644798555 24.687040488857246 21.279457906543257 40 24.27274255927358 20.217774740706023 27.065496996518895 28.443985703501497 41 19.235337681434228 28.987080916893554 22.171200211799977 29.606381189872238 42 25.27288924506903 18.426419185070962 33.04186985034471 23.258821719515293 43 24.56378864365727 17.68082601991349 23.95611590324462 33.79926943318462 44 21.279100136310458 18.607093152635514 33.63236961958292 26.481437091471115 45 18.890626062130377 16.05279257555213 30.746952692042118 34.30962867027538 46 28.315009534576703 24.624967353466257 25.927429885978626 21.132593225978415 47 13.17953983592657 18.646805648476438 44.594449552608324 23.57920496298867 48 20.40023755943458 26.569985224089386 25.749081424927283 27.280695791548755 49 21.57819605093217 16.012006769012803 38.91305825572701 23.496738924328017 50 23.458457509418302 16.31181822410012 29.04486080949093 31.18486345699065 51 20.109370360167294 17.144707326061056 26.498252292412765 36.247670021358886 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 44.0 1 179.0 2 314.0 3 1730.0 4 3146.0 5 2124.0 6 1102.0 7 1192.0 8 1282.0 9 1534.0 10 1786.0 11 1813.5 12 1841.0 13 1773.5 14 1706.0 15 1622.0 16 1538.0 17 1477.0 18 1416.0 19 1592.0 20 1768.0 21 1860.0 22 1952.0 23 2019.0 24 2086.0 25 2551.5 26 3459.0 27 3901.0 28 4403.5 29 4906.0 30 5400.0 31 5894.0 32 6618.0 33 7342.0 34 8594.0 35 9846.0 36 10800.5 37 11755.0 38 12593.0 39 13431.0 40 15088.0 41 16745.0 42 18966.5 43 21188.0 44 25255.5 45 29323.0 46 92700.0 47 156077.0 48 117750.5 49 79424.0 50 72207.0 51 64990.0 52 48659.0 53 32328.0 54 27510.0 55 22692.0 56 19807.0 57 16922.0 58 15074.5 59 13227.0 60 11096.5 61 8966.0 62 7538.5 63 6111.0 64 5007.5 65 3904.0 66 3301.0 67 2698.0 68 2232.0 69 1766.0 70 1445.5 71 1125.0 72 863.5 73 602.0 74 532.0 75 322.5 76 183.0 77 153.0 78 123.0 79 90.0 80 57.0 81 41.5 82 26.0 83 14.5 84 3.0 85 2.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 559018.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.675625333882227 #Duplication Level Percentage of deduplicated Percentage of total 1 73.46246754316242 21.065821953702088 2 10.840672640248409 6.217261339980623 3 4.011610483858324 3.4510631766178586 4 2.086209744915844 2.39293476052403 5 1.3136667468458298 1.8835107723065465 6 0.9975139155763597 1.7162601185040913 7 0.8050787887745116 1.6160296397807516 8 0.6904607499830813 1.583951501941293 9 0.638476492397565 1.6477841412435488 >10 4.956170595315648 22.94460370461794 >50 0.10294116525333616 2.03156072681086 >100 0.07767952960834569 4.526189806131558 >500 0.004420786237873332 0.8674608558944572 >1k 0.0069469498023723795 4.445238866134728 >5k 0.0025261635644990466 4.4378138358441905 >10k+ 0.0031577044556238085 19.172514799965427 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGC 32174 5.755449735071143 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCG 29446 5.267451137530455 No Hit GAATCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTC 22702 4.061049912525179 Illumina PCR Primer Index 11 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTTACAGCT 11141 1.9929590818184746 No Hit GCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 10405 1.8612996361476735 Illumina PCR Primer Index 11 (95% over 24bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTA 6902 1.2346650733965632 No Hit GAACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCT 6724 1.202823522677266 Illumina PCR Primer Index 11 (95% over 22bp) GAATGATCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTC 5714 1.0221495551127155 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCT 5165 0.9239416262088163 No Hit CTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGCT 4209 0.7529274549298949 Illumina PCR Primer Index 11 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 3957 0.7078484055969575 Illumina PCR Primer Index 11 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGC 2817 0.503919372900336 Illumina PCR Primer Index 11 (95% over 24bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTTACAGCTCGT 2332 0.41716009144607147 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATG 1969 0.3522247941926736 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1946 0.3481104365154611 No Hit TGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTGCTT 1764 0.31555334533056184 Illumina PCR Primer Index 11 (96% over 26bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTAT 1504 0.26904321506642004 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTT 1422 0.25437463552157535 No Hit CGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTG 1358 0.24292598807194046 Illumina PCR Primer Index 11 (95% over 23bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTTACAGC 1268 0.22682632759589136 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGC 786 0.14060370149082854 No Hit TCCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTG 735 0.13148056055440074 Illumina PCR Primer Index 11 (95% over 23bp) GAATGATCCGGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGC 682 0.12199964938517185 No Hit TTCCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCT 671 0.12003191310476587 Illumina PCR Primer Index 11 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCCGTCTTCTG 662 0.11842194705716094 Illumina PCR Primer Index 11 (95% over 23bp) GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGTTACAGCTCG 639 0.11430758937994842 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTACAGCTCGTATGCC 615 0.11001434658633531 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8849446708334973 0.0 2 0.0 0.0 0.0 4.187879460053165 0.0 3 0.0 0.0 0.0 5.136507232325256 0.0 4 0.0 0.0 0.0 7.552171844198219 0.0 5 0.0 0.0 0.0 13.57899030084899 0.0 6 0.0 0.0 0.0 14.697380048585197 0.0 7 0.0 0.0 0.0 16.49284996189747 0.0 8 0.0 0.0 0.0 18.679541624777734 0.0 9 0.0 0.0 0.0 19.202243934900128 0.0 10 0.0 0.0 0.0 25.824392058931913 0.0 11 0.0 0.0 0.0 27.84454167844327 0.0 12 0.0 0.0 0.0 35.76718459870702 0.0 13 0.0 0.0 0.0 36.68969514398463 0.0 14 0.0 0.0 0.0 37.16284627686407 0.0 15 0.0 0.0 0.0 38.8134192458919 0.0 16 0.0 0.0 0.0 39.81678586378256 0.0 17 0.0 0.0 0.0 40.76666583186946 0.0 18 0.0 0.0 0.0 41.599197163597594 0.0 19 0.0 0.0 0.0 44.546329456296576 0.0 20 0.0 0.0 0.0 45.48493966205024 0.0 21 0.0 0.0 0.0 46.36326558357692 0.0 22 0.0 0.0 0.0 47.38147966612882 0.0 23 0.0 0.0 0.0 48.25443903416348 0.0 24 0.0 0.0 0.0 48.90647528344347 0.0 25 0.0 0.0 0.0 49.44581390939111 0.0 26 0.0 0.0 0.0 49.94257787763542 0.0 27 0.0 0.0 0.0 50.56545585294212 0.0 28 0.0 0.0 0.0 51.09459802725494 0.0 29 0.0 0.0 0.0 51.68241451974713 0.0 30 0.0 0.0 0.0 52.30690246110143 0.0 31 0.0 0.0 0.0 52.8219127112186 0.0 32 0.0 0.0 0.0 53.32100218597612 0.0 33 0.0 0.0 0.0 53.803276459791995 0.0 34 0.0 0.0 0.0 54.31399346711555 0.0 35 0.0 0.0 0.0 54.84188344561356 0.0 36 1.7888511640054525E-4 0.0 0.0 55.30519589709097 0.0 37 1.7888511640054525E-4 0.0 0.0 55.81358739790132 0.0 38 1.7888511640054525E-4 0.0 0.0 56.35847146245738 0.0 39 1.7888511640054525E-4 0.0 0.0 57.25558032120612 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGGTA 20 7.030173E-4 45.000004 5 GCGAACA 20 7.030173E-4 45.000004 33 GTCCTCG 35 1.2104283E-7 45.000004 1 GTCTAGT 20 7.030173E-4 45.000004 18 GTCACCG 20 7.030173E-4 45.000004 36 ATTGCGT 20 7.030173E-4 45.000004 10 TTCGAAT 20 7.030173E-4 45.000004 12 TGCCCCG 25 3.8882266E-5 45.0 1 TTCGTCG 50 2.1827873E-11 45.0 1 GCGGGTC 25 3.8882266E-5 45.0 5 CGATCAC 25 3.8882266E-5 45.0 34 CGGGTAT 65 0.0 44.999996 6 CTAGAAC 30 2.1634933E-6 44.999996 4 CGTTTTT 975 0.0 44.30769 1 ACCGGTG 185 0.0 43.783783 17 TACGGCT 3610 0.0 43.69114 7 TGATACC 3330 0.0 43.58108 4 GATACCT 3360 0.0 43.392857 5 GCGACTG 835 0.0 43.383236 11 GGCGACT 830 0.0 43.373493 10 >>END_MODULE