##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933808.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 507596 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.210559184863552 28.0 16.0 31.0 16.0 34.0 2 25.946362855499256 30.0 16.0 33.0 16.0 34.0 3 26.98208811732165 31.0 16.0 33.0 16.0 34.0 4 31.277687373422957 33.0 28.0 35.0 19.0 37.0 5 33.359311342090955 35.0 32.0 35.0 28.0 37.0 6 31.790130339876594 35.0 30.0 37.0 17.0 37.0 7 33.32079646017699 35.0 32.0 35.0 29.0 37.0 8 32.2840053901134 35.0 32.0 37.0 17.0 37.0 9 34.4442529097944 35.0 32.0 39.0 29.0 39.0 10 33.63831669280294 35.0 32.0 37.0 27.0 39.0 11 34.44765522186936 35.0 32.0 39.0 27.0 39.0 12 34.64491839967218 37.0 34.0 39.0 27.0 39.0 13 34.908478396204856 37.0 34.0 39.0 30.0 39.0 14 34.63714844088606 37.0 33.0 39.0 27.0 40.0 15 35.29349325053783 37.0 34.0 39.0 27.0 40.0 16 34.83139150032703 36.0 32.0 39.0 27.0 40.0 17 34.21442052340838 36.0 32.0 38.0 27.0 40.0 18 34.65025729123161 36.0 32.0 39.0 27.0 40.0 19 34.41892568105344 36.0 32.0 39.0 27.0 40.0 20 34.31427552620588 36.0 32.0 39.0 26.0 40.0 21 34.03684426197212 36.0 32.0 39.0 25.0 40.0 22 35.301893631943514 37.0 34.0 39.0 29.0 40.0 23 35.62759162798761 37.0 34.0 39.0 29.0 40.0 24 35.95567143949125 38.0 34.0 39.0 30.0 40.0 25 33.94884908470516 36.0 32.0 39.0 24.0 40.0 26 34.8496560256582 37.0 33.0 39.0 27.0 40.0 27 35.15470571084091 37.0 33.0 39.0 29.0 40.0 28 35.24870960370058 37.0 34.0 39.0 27.0 40.0 29 35.70980267772008 38.0 34.0 40.0 29.0 40.0 30 34.010476835908875 37.0 32.0 39.0 24.0 40.0 31 34.881374163705 37.0 33.0 39.0 27.0 40.0 32 35.34882071568728 37.0 34.0 39.0 30.0 40.0 33 35.73314013506805 38.0 35.0 40.0 30.0 40.0 34 35.944006650958634 38.0 35.0 40.0 30.0 40.0 35 35.98542738713465 38.0 35.0 40.0 30.0 41.0 36 35.90785782393872 38.0 35.0 40.0 30.0 41.0 37 35.91285392319877 38.0 35.0 40.0 30.0 41.0 38 35.86841503873159 38.0 35.0 40.0 30.0 41.0 39 35.59556812898447 38.0 34.0 40.0 30.0 41.0 40 35.46734804844798 38.0 34.0 40.0 29.0 41.0 41 34.97260813717996 37.0 33.0 40.0 27.0 40.0 42 35.820672345723764 38.0 35.0 40.0 30.0 41.0 43 35.79956106825113 38.0 35.0 40.0 30.0 41.0 44 36.33491201664316 39.0 35.0 40.0 31.0 41.0 45 36.59789872260617 39.0 36.0 40.0 32.0 41.0 46 36.30824907997699 39.0 35.0 40.0 31.0 41.0 47 35.77042175273249 38.0 35.0 40.0 28.0 41.0 48 36.037663811377556 38.0 35.0 40.0 30.0 41.0 49 36.3398371933585 39.0 35.0 40.0 31.0 41.0 50 35.96755293579934 38.0 35.0 40.0 29.0 41.0 51 35.45220805522502 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 2.0 11 10.0 12 8.0 13 9.0 14 16.0 15 30.0 16 68.0 17 233.0 18 556.0 19 1159.0 20 1730.0 21 2086.0 22 2341.0 23 2437.0 24 2985.0 25 3911.0 26 5404.0 27 7329.0 28 9861.0 29 13489.0 30 18327.0 31 25224.0 32 34437.0 33 45175.0 34 56336.0 35 68818.0 36 77817.0 37 76663.0 38 46345.0 39 4787.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.764931165730225 2.76755529988416 39.671904427930876 12.795609106454739 2 13.593487734339908 32.32767791708366 37.74044712724292 16.3383872213335 3 12.764481989613788 32.23547860897249 40.26844183169292 14.731597569720803 4 14.760163594669775 2.746672550611116 65.1900330183847 17.303130836334407 5 36.17778705899968 3.1875743701684014 39.74913119882741 20.885507372004508 6 14.85334793812402 26.585906902339655 42.23949755317221 16.321247606364118 7 57.5045902646987 0.8953971268489113 35.90808438206763 5.691928226384762 8 53.89423872528546 21.748201325463555 14.003459444124855 10.354100505126123 9 51.300049645781286 2.43087021962348 14.796806909431911 31.472273225163317 10 39.38289505827469 14.53892465661668 25.12628153098133 20.9518987541273 11 29.590067691628775 22.204075682235477 28.683638168937502 19.522218457198246 12 19.75251972040757 18.260388182727997 32.555024074263784 29.43206802260065 13 21.265534007360184 21.872709792827365 42.68296046462147 14.17879573519098 14 18.19695190663441 30.60800321515536 25.99488569649879 25.20015918171144 15 9.613944948344747 24.909573755506347 44.567727090047995 20.908754206100916 16 11.238465236132672 26.611320814190815 25.261231372981662 36.88898257669485 17 12.316290908517798 29.635182310341296 36.36159465401619 21.686932127124724 18 11.223886713055265 25.084910046572475 35.404731321759826 28.28647191861244 19 11.888588562557624 28.83040843505465 30.347559870448155 28.933443131939573 20 14.355511075737398 27.3357158054831 43.251916878777614 15.056856240001892 21 18.275754734079857 35.26899345148504 28.846563014680964 17.608688799754134 22 12.929573913112002 22.577601084326908 35.98905428726783 28.503770715293264 23 14.867138432926975 33.053451957856254 30.056383423037218 22.02302618617956 24 20.017691234761504 23.529145225730698 26.20056107613141 30.252602463376387 25 12.355495315171908 38.00010244367568 23.608933088519215 26.035469152633194 26 17.33386393903813 21.858131269749958 32.69154997281302 28.116454818398886 27 19.559649800234833 27.317394148102036 28.282334770171552 24.84062128149158 28 12.395684757169088 24.460003624930064 36.68626230309143 26.45804931480942 29 23.792937690604337 16.959353501603637 32.24257086344258 27.005137944349443 30 13.965831094019654 27.69052553605623 36.05721873300814 22.28642463691597 31 20.09531201979527 19.102790408119844 28.60050118598255 32.20139638610233 32 20.58645064184903 27.987218181388346 32.11353123350066 19.312799943261965 33 16.7071844537782 16.991268646719043 27.275628649555944 39.025918249946805 34 26.56600918840968 18.6841503873159 33.235880503392465 21.513959920881963 35 16.329915917383115 17.811212066288938 38.43272996635119 27.426142049976754 36 28.33060150198189 18.002111915775536 26.38633874183406 27.280947840408516 37 13.433320987557035 17.030473053373154 50.192081891898276 19.34412406717153 38 17.621100245076793 19.388647664678206 25.926721250758476 37.06353083948652 39 20.43790731211436 19.84353698610706 41.239686679958076 18.478869021820504 40 16.18491871488349 17.803725797681622 37.32614126194848 28.685214225486412 41 23.08981946272232 21.39358860195904 32.307583196085076 23.209008739233564 42 18.644748973593174 15.918762165186488 43.15518640808832 22.281302453132017 43 32.02133192538948 16.294060630895437 24.952521296464116 26.73208614725096 44 20.04192310420098 16.002884183484504 37.1876452927131 26.767547419601417 45 17.317512352343204 14.16796034641723 31.868651447213924 36.64587585402565 46 29.14089157518972 20.74346527553409 31.3678594787981 18.747783670478096 47 12.92189063743607 15.841338387221334 47.35143696955847 23.885334005784127 48 19.81832008132452 21.2137211483148 31.313091513723514 27.654867256637168 49 17.274367804316817 13.037533786712267 45.73322090796618 23.954877501004738 50 25.987990449097314 13.252074484432502 32.31585749296685 28.444077573503336 51 19.239119299600468 14.019811030819787 30.297126060883066 36.443943608696685 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 91.0 1 183.5 2 276.0 3 1584.0 4 2892.0 5 1934.5 6 977.0 7 1083.5 8 1190.0 9 1360.0 10 1530.0 11 1524.0 12 1518.0 13 1561.0 14 1604.0 15 1469.5 16 1335.0 17 1377.0 18 1419.0 19 1376.0 20 1333.0 21 1529.0 22 1725.0 23 2045.0 24 2365.0 25 2661.5 26 3562.5 27 4167.0 28 5037.0 29 5907.0 30 6816.0 31 7725.0 32 8518.5 33 9312.0 34 9983.0 35 10654.0 36 11502.5 37 12351.0 38 13593.0 39 14835.0 40 16563.0 41 18291.0 42 20404.0 43 22517.0 44 25849.0 45 29181.0 46 91296.0 47 153411.0 48 115175.0 49 76939.0 50 67663.0 51 58387.0 52 41305.5 53 24224.0 54 19471.0 55 14718.0 56 11856.0 57 8994.0 58 7459.0 59 5924.0 60 4800.0 61 3676.0 62 3017.5 63 2359.0 64 1761.0 65 1163.0 66 967.5 67 772.0 68 571.5 69 371.0 70 322.0 71 273.0 72 185.0 73 97.0 74 84.5 75 60.0 76 48.0 77 27.5 78 7.0 79 6.0 80 5.0 81 3.0 82 1.0 83 1.5 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 507596.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.455429719927327 #Duplication Level Percentage of deduplicated Percentage of total 1 72.96749245712687 21.49288845910228 2 11.740750493528482 6.916577020426606 3 4.41392402995036 3.900420871599037 4 2.264524712851113 2.6681019411369826 5 1.4727575815414073 2.1690353718791533 6 1.0263955196265844 1.8139752655925485 7 0.8161954195330933 1.6828970772448542 8 0.7151081355000456 1.6851053941895888 9 0.6018343335510392 1.5954560023456743 >10 3.7755162915348763 17.745746747467518 >50 0.11086239520397702 2.2880399174080024 >100 0.0757109040417404 4.5975843436559725 >500 0.005407921717267171 1.1005131514675859 >1k 0.00743589236124236 5.158692731721044 >5k 0.0027039608586335853 4.8060586099100995 >10k+ 0.003379951073291982 20.378907094853087 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGC 31364 6.178929699997636 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCG 27951 5.506544574819344 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTC 21878 4.310120647128819 TruSeq Adapter, Index 23 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCTCTTGT 10807 2.1290553905074114 No Hit GCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 10347 2.0384321389451454 TruSeq Adapter, Index 23 (95% over 24bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTA 6824 1.3443762362193556 No Hit GAACTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCT 6471 1.274832740998747 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTC 5537 1.0908281389136243 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCT 5305 1.0451224989952639 No Hit CCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 4391 0.8650580382824135 TruSeq Adapter, Index 23 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGCT 4313 0.8496914869305511 TruSeq Adapter, Index 20 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 3244 0.6390909305825894 TruSeq Adapter, Index 23 (95% over 24bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGT 2314 0.455874356771921 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATG 1890 0.3723433596797453 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1890 0.3723433596797453 No Hit TGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGCTT 1724 0.33964018628988407 TruSeq Adapter, Index 23 (96% over 26bp) GAATGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTT 1701 0.3351090237117708 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTAT 1651 0.3252586702810897 No Hit CGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTG 1524 0.3002387725671597 TruSeq Adapter, Index 20 (95% over 21bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTCTCTTG 1266 0.24941094886484527 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGC 801 0.1578026619595111 No Hit TCCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTG 746 0.1469672731857619 TruSeq Adapter, Index 20 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCT 744 0.14657325904853466 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCGTCTCTTGTCG 712 0.14026903285289877 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCC 710 0.1398750187156715 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGC 658 0.12963065114776318 No Hit TGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTG 617 0.12155336133460469 TruSeq Adapter, Index 20 (95% over 21bp) TTCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTG 539 0.10618680998274219 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9531201979527025 0.0 2 0.0 0.0 0.0 4.717728272090403 0.0 3 0.0 0.0 0.0 5.778020315368916 0.0 4 0.0 0.0 0.0 8.459483526268922 0.0 5 0.0 0.0 0.0 14.865759383446678 0.0 6 0.0 0.0 0.0 16.199891252098126 0.0 7 0.0 0.0 0.0 18.27949786838352 0.0 8 0.0 0.0 0.0 20.717263335408475 0.0 9 0.0 0.0 0.0 21.265928021497412 0.0 10 0.0 0.0 0.0 28.29297315187669 0.0 11 0.0 0.0 0.0 30.63243209166345 0.0 12 0.0 0.0 0.0 39.078913151403874 0.0 13 0.0 0.0 0.0 40.0310483140135 0.0 14 0.0 0.0 0.0 40.53459838138993 0.0 15 0.0 0.0 0.0 42.28776428498254 0.0 16 0.0 0.0 0.0 43.45936532202776 0.0 17 0.0 0.0 0.0 44.63451248630801 0.0 18 0.0 0.0 0.0 45.63195927469878 0.0 19 0.0 0.0 0.0 48.85992009393297 0.0 20 0.0 0.0 0.0 49.896965303115074 0.0 21 0.0 0.0 0.0 50.97892812394109 0.0 22 0.0 0.0 0.0 52.18067124248418 0.0 23 0.0 0.0 0.0 53.23485606663567 0.0 24 0.0 0.0 0.0 54.02032324919818 0.0 25 0.0 0.0 0.0 54.73526190119701 0.0 26 0.0 0.0 0.0 55.38952237606285 0.0 27 0.0 0.0 0.0 55.99571312618697 0.0 28 0.0 0.0 0.0 56.55403115863797 0.0 29 0.0 0.0 0.0 57.14564338568468 0.0 30 0.0 0.0 0.0 57.81999858154911 0.0 31 0.0 0.0 0.0 58.45180025059299 0.0 32 0.0 0.0 0.0 58.985295392398676 0.0 33 0.0 0.0 0.0 59.53258102900732 0.0 34 0.0 0.0 0.0 60.07494148890062 0.0 35 0.0 0.0 0.0 60.608830644843536 0.0 36 0.0 0.0 0.0 61.159662408687225 0.0 37 0.0 0.0 0.0 61.689611423257865 0.0 38 0.0 0.0 0.0 62.202420822859125 0.0 39 0.0 0.0 0.0 62.721534448656016 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTTTCG 35 1.2101373E-7 45.000004 1 GTTTGCG 85 0.0 45.000004 1 ATGGGCG 25 3.887716E-5 45.000004 5 GTTCTCG 25 3.887716E-5 45.000004 1 CGACGAA 25 3.887716E-5 45.000004 19 GAGTCGC 25 3.887716E-5 45.000004 17 GGCACGT 25 3.887716E-5 45.000004 8 CGTTGTA 25 3.887716E-5 45.000004 23 TAGCGGG 65 0.0 45.000004 3 TCGGGTT 35 1.2101373E-7 45.000004 5 CGACCCG 50 2.1827873E-11 45.000004 37 GACCCGT 50 2.1827873E-11 45.000004 38 CCGAGGA 65 0.0 45.000004 18 GCGATTC 35 1.2101373E-7 45.000004 9 CGCGTTG 25 3.887716E-5 45.000004 21 CCACGTA 25 3.887716E-5 45.000004 34 ACGACCC 50 2.1827873E-11 45.000004 36 AGTCGCG 25 3.887716E-5 45.000004 18 CTTCGTG 20 7.0295593E-4 45.0 1 CTTCGAA 40 6.8030204E-9 45.0 13 >>END_MODULE