##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933802.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1171823 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.03152438550873 31.0 16.0 33.0 16.0 34.0 2 28.303384555517344 31.0 25.0 33.0 16.0 34.0 3 29.193566775869733 31.0 28.0 34.0 16.0 34.0 4 32.6577392660837 35.0 32.0 37.0 28.0 37.0 5 33.879955419888496 35.0 33.0 37.0 28.0 37.0 6 33.025708660778974 35.0 33.0 37.0 26.0 37.0 7 33.61104108726318 35.0 32.0 35.0 30.0 37.0 8 33.71740186017854 35.0 35.0 37.0 28.0 37.0 9 34.80190011631449 37.0 33.0 39.0 29.0 39.0 10 33.74001363687178 35.0 32.0 39.0 27.0 39.0 11 34.34516560948198 37.0 32.0 39.0 27.0 39.0 12 34.45981005663825 37.0 33.0 39.0 27.0 39.0 13 34.95563237792739 37.0 34.0 39.0 30.0 39.0 14 34.700153521478924 37.0 33.0 39.0 27.0 40.0 15 35.17780074294497 37.0 33.0 39.0 27.0 40.0 16 34.71515834729306 36.0 32.0 39.0 27.0 40.0 17 34.50640241742994 36.0 32.0 39.0 27.0 40.0 18 34.61435728774738 37.0 32.0 39.0 27.0 40.0 19 34.42860909881441 37.0 32.0 39.0 27.0 40.0 20 35.28054236860004 37.0 33.0 39.0 28.0 40.0 21 34.495213867623356 37.0 32.0 39.0 25.0 40.0 22 35.53574387940841 37.0 34.0 39.0 29.0 40.0 23 36.305114338940264 38.0 34.0 39.0 30.0 40.0 24 36.43402800593605 38.0 35.0 40.0 31.0 40.0 25 34.188565167265025 37.0 32.0 39.0 24.0 40.0 26 34.98671642389678 37.0 33.0 39.0 27.0 40.0 27 35.793478195939144 37.0 34.0 39.0 30.0 40.0 28 35.97091881623761 38.0 35.0 40.0 30.0 40.0 29 36.45376477505562 38.0 35.0 40.0 30.0 41.0 30 34.12211997887053 37.0 32.0 39.0 24.0 40.0 31 35.0323982376178 37.0 33.0 39.0 27.0 40.0 32 35.66342783850462 37.0 34.0 39.0 30.0 40.0 33 36.321613417726056 38.0 35.0 40.0 30.0 40.0 34 36.57830747476368 38.0 35.0 40.0 31.0 41.0 35 36.77410154946609 39.0 35.0 40.0 31.0 41.0 36 36.7070129191866 39.0 35.0 40.0 31.0 41.0 37 37.008456055223355 39.0 36.0 40.0 32.0 41.0 38 36.43239123997395 38.0 35.0 40.0 30.0 41.0 39 36.41101599814989 38.0 35.0 40.0 31.0 41.0 40 35.943455624270904 38.0 35.0 40.0 30.0 41.0 41 35.480575991425326 37.0 34.0 40.0 29.0 41.0 42 36.44221866271613 38.0 35.0 40.0 31.0 41.0 43 36.55129144930591 38.0 35.0 40.0 31.0 41.0 44 36.96106323224583 39.0 36.0 40.0 32.0 41.0 45 37.166676195978404 39.0 36.0 40.0 33.0 41.0 46 36.943119396018 39.0 35.0 40.0 32.0 41.0 47 36.80481096547857 39.0 35.0 40.0 31.0 41.0 48 36.877333863561304 39.0 35.0 40.0 32.0 41.0 49 37.066050930899976 39.0 35.0 40.0 32.0 41.0 50 36.92131149499541 39.0 35.0 40.0 32.0 41.0 51 36.213745591271035 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 8.0 10 17.0 11 24.0 12 19.0 13 33.0 14 32.0 15 69.0 16 122.0 17 230.0 18 499.0 19 906.0 20 1396.0 21 2091.0 22 2763.0 23 3593.0 24 4822.0 25 6811.0 26 9399.0 27 12389.0 28 16906.0 29 24018.0 30 33740.0 31 47686.0 32 66980.0 33 91201.0 34 119328.0 35 161002.0 36 205844.0 37 217789.0 38 128566.0 39 13537.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.844655720189824 3.8864231202152544 49.96710254023005 14.30181861936487 2 17.917040372138114 14.950722080041098 46.62709299954003 20.505144548280757 3 17.771625919614138 15.049713139271034 48.411236167919554 18.76742477319527 4 17.094902557809498 3.763793678738171 56.35825547032274 22.783048293129593 5 24.62880486216775 4.658382707968696 47.3594561636015 23.353356266262054 6 18.441607648936742 14.324091607691605 49.986730077835986 17.247570665535665 7 73.51827025071192 1.2134085096469347 20.52639349116718 4.741927748473959 8 73.03210467792492 9.655383108199787 9.838943253375296 7.473568960500007 9 68.67538868924744 3.6809313351931134 11.657989303845376 15.985690671714073 10 34.874038143985906 23.409252079878957 24.00823332534009 17.708476450795043 11 27.44561251997955 24.036223900708553 27.147188611249312 21.370974968062583 12 20.276867752211725 19.861019966325973 34.09149675334927 25.770615528113034 13 21.73749789857342 22.861387769313286 38.25902034692953 17.14209398518377 14 21.369524237022144 25.698420324571202 29.52869161980948 23.403363818597178 15 16.335060841099722 25.135109995280857 38.06607311855118 20.46375604506824 16 17.068533387721523 25.15482287000682 29.186489768505997 28.590153973765663 17 17.814209142507018 26.515267237458218 32.386887780833796 23.283635839200972 18 17.291348608108905 24.255454962054852 33.84154432879368 24.611652101042562 19 18.869061283146003 26.889385171651348 29.948464913216416 24.29308863198623 20 19.84463523928102 25.92533172671982 36.173722481978935 18.05631055202023 21 21.962958569681597 28.94737515819369 29.47100372667203 19.618662545452683 22 18.739860883426935 23.723975378534128 31.29645006114405 26.239713676894887 23 18.36267081291287 28.597748977447957 29.159437901457814 23.880142308181355 24 21.750639815057394 23.455931484533075 27.82007180265279 26.973356897756744 25 17.399385402061572 30.252094386268237 25.634844170151975 26.713676041518212 26 19.89728824233694 23.883385118742336 30.277354173795874 25.941972465124852 27 19.830298603116685 25.799459474681758 28.098270813936914 26.271971108264648 28 16.034930189968964 23.57830491465008 35.90832403869867 24.47844085668228 29 21.688343717438556 21.154986717277268 30.688764429440283 26.467905135843893 30 18.225619398151427 27.111261683718446 30.53430424219357 24.128814675936553 31 19.869895026808656 26.764878313533696 28.72165847572543 24.643568183932217 32 19.300781773356558 29.661561515689655 27.656736554923395 23.380920156030392 33 16.361003325587568 28.73505640356948 25.881297772786503 29.022642498056445 34 21.843315927405417 26.450069677758503 28.609525500011518 23.097088894824562 35 17.088502273807563 24.32543140047601 26.494615654411973 32.09145067130446 36 21.463480406170557 27.51447957584038 27.633695532516427 23.388344485472633 37 15.58921441207418 24.67821505466269 34.59507109862155 25.13749943464158 38 16.84640086429435 28.813737228233272 30.304235366603997 24.035626540868375 39 18.70751811493715 29.08792539487619 32.17303295804913 20.031523532137534 40 18.62354638883176 27.802492355927473 27.81392753001093 25.760033725229835 41 17.764116253051867 31.81444637970069 24.591256529356396 25.83018083789105 42 18.617316779069874 23.218694290861333 29.767976904361838 28.396012025706952 43 21.477731705214868 25.82301251980888 27.111944380678654 25.5873113942976 44 19.186771381002078 22.286471591699428 31.013472171138474 27.51328485616002 45 19.328431000244915 20.38925673928571 29.6765808488142 30.605731411655174 46 23.530772138795705 24.712776588273144 28.938670771951053 22.8177805009801 47 15.425964501464811 23.84404470641044 36.99517759934734 23.734813192777406 48 18.25651143560077 25.745014392105293 28.68769430195516 27.31077987033878 49 18.23022760263282 20.772164396841504 35.79900718794562 25.198600812580057 50 20.906997046482275 21.27992026099505 30.19372379617058 27.619358896352093 51 18.110670297476666 20.99284618922824 27.483587538391035 33.41289597490406 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 148.0 1 372.0 2 596.0 3 2045.5 4 3495.0 5 2531.0 6 1567.0 7 1622.0 8 1677.0 9 1694.0 10 1711.0 11 1810.0 12 1909.0 13 1913.0 14 1917.0 15 2000.5 16 2084.0 17 2090.5 18 2097.0 19 2262.0 20 2427.0 21 2707.5 22 2988.0 23 3612.0 24 4236.0 25 4813.0 26 6451.5 27 7513.0 28 8814.5 29 10116.0 30 12492.0 31 14868.0 32 17666.0 33 20464.0 34 23321.0 35 26178.0 36 29999.0 37 33820.0 38 37826.5 39 41833.0 40 48978.5 41 56124.0 42 67288.5 43 78453.0 44 149728.0 45 221003.0 46 195906.5 47 170810.0 48 159880.0 49 148950.0 50 121103.5 51 93257.0 52 78100.5 53 62944.0 54 53238.0 55 43532.0 56 38284.5 57 33037.0 58 29102.5 59 25168.0 60 22097.5 61 19027.0 62 16070.5 63 13114.0 64 10584.5 65 8055.0 66 6510.5 67 4966.0 68 3719.5 69 2473.0 70 2001.0 71 1529.0 72 1193.5 73 858.0 74 769.5 75 562.0 76 443.0 77 326.0 78 209.0 79 139.5 80 70.0 81 48.0 82 26.0 83 29.0 84 32.0 85 17.5 86 3.0 87 10.0 88 17.0 89 10.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1171823.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.23457210022326 #Duplication Level Percentage of deduplicated Percentage of total 1 70.10904906696135 22.599351970270554 2 12.965393307832723 8.358678107781719 3 5.12920604458194 4.960132861829325 4 2.609471367884039 3.36460771806105 5 1.4293255267486003 2.303684837333367 6 0.9753249667940592 1.886350977796257 7 0.7206324084209852 1.6260494128902645 8 0.5818044153227792 1.5003373099160289 9 0.42522169294904 1.2336155387950343 >10 4.860274676399545 29.5383977568575 >50 0.11087516971572398 2.4984491962371314 >100 0.07222743637066065 4.4237048706315365 >500 0.004530872388493816 1.016684923870743 >1k 0.0034647847676717424 1.9318216324283866 >5k 0.0018656533364386303 3.770772181309006 >10k+ 0.001332609526027593 8.987360703992081 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 32534 2.7763578629195704 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 26553 2.2659565480452253 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 21587 1.842172409997073 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 13391 1.1427493742655674 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTAACAT 10546 0.8999652677921496 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 7361 0.6281665405099576 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 6962 0.594117029619661 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTA 6594 0.5627129694501645 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 6554 0.5592994846491322 No Hit TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 5974 0.5098039550341646 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 5409 0.4615884822195843 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 5037 0.4298430735699845 No Hit TGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCTT 2954 0.2520858525562308 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCTTAACATCGT 2347 0.20028622070056654 No Hit CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 2023 0.17263699381220543 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATG 1969 0.1680287893308119 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1783 0.15215608500601202 No Hit TCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 1755 0.14976664564528944 No Hit TTCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 1482 0.1264696118782444 No Hit TGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 1448 0.12356814979736701 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTAT 1446 0.12339747555731541 No Hit GCTGTCTCTTATACACATCTGACGCGCTTCACATCGTATGCCGTCTTCTGC 1431 0.1221174187569283 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 1370 0.11691185443535414 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCTTAACA 1336 0.11401039235447676 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6845743768470153 0.0 2 0.0 0.0 0.0 3.3930892293460704 0.0 3 0.0 0.0 0.0 4.256188861287072 0.0 4 0.0 0.0 0.0 5.919750679070132 0.0 5 0.0 0.0 0.0 9.403894615483738 0.0 6 0.0 0.0 0.0 10.369740139935809 0.0 7 0.0 0.0 0.0 11.662597508326769 0.0 8 0.0 0.0 0.0 13.421480889178655 0.0 9 0.0 0.0 0.0 13.94715754853762 0.0 10 0.0 0.0 0.0 17.541813055384644 0.0 11 8.533712002580594E-5 0.0 0.0 19.838320292399107 0.0 12 8.533712002580594E-5 0.0 0.0 24.69169831962677 0.0 13 8.533712002580594E-5 0.0 0.0 25.559150144689088 0.0 14 8.533712002580594E-5 0.0 0.0 25.89179423854968 0.0 15 8.533712002580594E-5 0.0 0.0 26.859943865242446 0.0 16 8.533712002580594E-5 0.0 0.0 27.868457949707423 0.0 17 8.533712002580594E-5 0.0 0.0 29.217040457475232 0.0 18 8.533712002580594E-5 0.0 0.0 30.60965691917636 0.0 19 8.533712002580594E-5 0.0 0.0 32.50866385111062 0.0 20 8.533712002580594E-5 0.0 0.0 33.60720859720282 0.0 21 8.533712002580594E-5 0.0 0.0 34.97285852897579 0.0 22 8.533712002580594E-5 0.0 0.0 36.47445049294987 0.0 23 8.533712002580594E-5 0.0 0.0 37.985941562846946 0.0 24 8.533712002580594E-5 0.0 0.0 39.11256222142764 0.0 25 8.533712002580594E-5 0.0 0.0 40.09794994636562 0.0 26 8.533712002580594E-5 0.0 0.0 40.95379592310443 0.0 27 8.533712002580594E-5 0.0 0.0 41.81006858544337 0.0 28 1.706742400516119E-4 0.0 0.0 42.70687637979456 0.0 29 1.706742400516119E-4 0.0 0.0 43.604964230946145 0.0 30 1.706742400516119E-4 0.0 0.0 44.53411479378712 0.0 31 1.706742400516119E-4 0.0 0.0 45.4378348948604 0.0 32 1.706742400516119E-4 0.0 0.0 46.27576007639379 0.0 33 1.706742400516119E-4 0.0 0.0 47.090985584000315 0.0 34 1.706742400516119E-4 0.0 0.0 47.893666534963046 0.0 35 1.706742400516119E-4 0.0 0.0 48.7149509780914 0.0 36 1.706742400516119E-4 0.0 0.0 49.48605719464458 0.0 37 1.706742400516119E-4 0.0 0.0 50.2794363995245 0.0 38 1.706742400516119E-4 0.0 0.0 51.070852850643824 0.0 39 1.706742400516119E-4 0.0 0.0 51.8515168246399 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTC 25 3.8908518E-5 45.000004 5 ATCCGGC 65 0.0 45.000004 6 CATTGCG 20 7.033343E-4 45.0 1 TAGCGCG 20 7.033343E-4 45.0 1 TACGGGT 90 0.0 45.0 4 TCCGTCG 20 7.033343E-4 45.0 1 CGATAGC 20 7.033343E-4 45.0 10 TCGCGAG 40 6.8157533E-9 45.0 1 ATGCGAA 30 2.1655396E-6 44.999996 26 TACGGCT 3600 0.0 43.625 7 ACGGCTG 3665 0.0 42.851295 8 TCCGTTG 170 0.0 42.352943 1 CCCGCTT 75 0.0 42.0 40 CTACGGC 145 0.0 41.896553 6 ATACGGC 7060 0.0 41.87677 6 GATACGG 7120 0.0 41.65028 5 TGATACG 7155 0.0 41.603775 4 ACGGGTA 65 0.0 41.538464 5 CGTTTTT 1870 0.0 41.390373 1 ATGATAC 10210 0.0 41.36386 3 >>END_MODULE