##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933800.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 773932 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.616303499532258 30.0 16.0 33.0 16.0 34.0 2 27.93516226231762 31.0 25.0 33.0 16.0 34.0 3 28.876517575187485 31.0 28.0 34.0 16.0 34.0 4 32.475742054857534 35.0 30.0 35.0 26.0 37.0 5 33.79982220660213 35.0 33.0 37.0 28.0 37.0 6 32.91643839510448 35.0 32.0 37.0 26.0 37.0 7 33.561625569171454 35.0 32.0 35.0 29.0 37.0 8 33.48320524283787 35.0 33.0 37.0 28.0 37.0 9 34.774219182047 37.0 32.0 39.0 29.0 39.0 10 33.57333719241484 35.0 31.0 39.0 27.0 39.0 11 34.10829116769949 35.0 32.0 39.0 27.0 39.0 12 34.217479055007416 37.0 32.0 39.0 26.0 39.0 13 34.50803558969005 37.0 33.0 39.0 27.0 39.0 14 34.37918706036189 37.0 32.0 39.0 25.0 40.0 15 34.785249866913375 37.0 32.0 39.0 27.0 40.0 16 34.25874237013071 36.0 32.0 39.0 27.0 40.0 17 34.269103745548705 36.0 32.0 38.0 27.0 40.0 18 34.272116930169574 36.0 32.0 39.0 27.0 40.0 19 33.875159574743 36.0 32.0 39.0 25.0 40.0 20 34.91916990123163 37.0 33.0 39.0 27.0 40.0 21 34.36279027097988 37.0 32.0 39.0 25.0 40.0 22 35.31377304466025 37.0 34.0 39.0 28.0 40.0 23 36.197633642232134 38.0 34.0 39.0 30.0 40.0 24 36.31772041988185 38.0 35.0 40.0 31.0 40.0 25 34.236321795713316 37.0 32.0 39.0 25.0 40.0 26 34.97685197149104 37.0 33.0 39.0 27.0 40.0 27 35.56619832233323 37.0 34.0 39.0 30.0 40.0 28 35.788801858561214 38.0 34.0 39.0 30.0 40.0 29 36.27070982980417 38.0 35.0 40.0 30.0 41.0 30 33.748096732012634 36.0 32.0 39.0 24.0 40.0 31 34.717838259692066 37.0 33.0 39.0 26.0 40.0 32 35.2247432590977 37.0 34.0 39.0 29.0 40.0 33 36.00852917310565 38.0 35.0 39.0 30.0 40.0 34 36.294307510220534 38.0 35.0 40.0 31.0 41.0 35 36.40423835685822 38.0 35.0 40.0 31.0 41.0 36 36.324828279487086 38.0 35.0 40.0 31.0 41.0 37 36.5321643245143 38.0 35.0 40.0 31.0 41.0 38 36.1598848477644 38.0 35.0 40.0 30.0 41.0 39 36.1466433743533 38.0 35.0 40.0 30.0 41.0 40 35.594854586707875 38.0 34.0 40.0 30.0 41.0 41 35.01070636696764 37.0 33.0 39.0 28.0 40.0 42 35.98729604151269 38.0 35.0 40.0 30.0 41.0 43 36.100680679956376 38.0 35.0 40.0 31.0 40.0 44 36.507954187189576 38.0 35.0 40.0 31.0 41.0 45 36.82789573244161 38.0 35.0 40.0 32.0 41.0 46 36.626757906379375 38.0 35.0 40.0 32.0 41.0 47 36.50785340314136 38.0 35.0 40.0 31.0 41.0 48 36.60547050645276 38.0 35.0 40.0 32.0 41.0 49 36.79601179431785 39.0 35.0 40.0 32.0 41.0 50 36.569467343384176 38.0 35.0 40.0 31.0 41.0 51 35.83710196761473 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 8.0 10 14.0 11 14.0 12 18.0 13 18.0 14 31.0 15 58.0 16 91.0 17 157.0 18 338.0 19 562.0 20 906.0 21 1364.0 22 1967.0 23 2562.0 24 3533.0 25 4868.0 26 6915.0 27 9237.0 28 12656.0 29 18071.0 30 25786.0 31 36529.0 32 51354.0 33 66709.0 34 84140.0 35 110502.0 36 132314.0 37 128449.0 38 68319.0 39 6438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.78961975987554 3.478083345823664 45.85803403916623 15.87426285513456 2 17.518593364791737 16.748887499160134 44.83132885059669 20.901190285451435 3 18.718828010729624 16.742039352294515 46.068517647545264 18.470614989430594 4 19.112402640025223 3.7507171172661162 54.4400541649654 22.696826077743264 5 26.166510752882683 4.307355168154308 44.54680772987808 24.979326349084932 6 19.84412067210039 15.13337089046583 46.372420315996756 18.650088121437026 7 69.14225022353385 1.559826961541841 23.473509300558707 5.824413514365603 8 66.41720461229151 10.896952187013847 12.548776895127736 10.137066305566897 9 62.36762402898446 3.5924344774476316 15.222526010037058 18.81741548353085 10 39.5360315893386 17.739930639901182 24.061803879410597 18.66223389134963 11 29.316658311066092 20.970059385062253 28.148597034364776 21.56468526950688 12 23.242352041264606 17.17980391042107 34.7839345058739 24.79390954244042 13 23.7989900921528 20.545861910348712 38.89501920065329 16.7601287968452 14 20.42479184217735 24.336246595308115 31.97050903696966 23.26845252554488 15 14.453466195996548 23.0717944212153 41.687771018642465 20.786968364145686 16 18.328612849707724 23.317552446468166 27.98734255722725 30.36649214659686 17 18.61197107756237 24.641699787578236 32.50518133376059 24.241147801098805 18 18.40303799300197 21.094618131825534 34.75085666440979 25.751487210762704 19 18.676188605717297 23.598843309231302 30.87441790751642 26.850550177534977 20 18.854369634541534 26.31652393233514 36.66950067964627 18.15960575347705 21 22.044701601691106 27.69093408723247 30.61754779489671 19.646816516179715 22 17.06622804070642 22.124424368032333 33.435366414620404 27.373981176640843 23 18.538062775541004 26.095057446907482 30.72711814474657 24.639761632804948 24 22.392664988655334 23.211858406164882 26.64394287870252 27.751533726477263 25 18.122910023102808 29.614358884243057 24.10651064951443 28.156220443139706 26 17.31108159373175 25.987296041512693 28.339311464056273 28.362310900699285 27 19.73816821116067 28.2606223802608 28.099367903123273 23.90184150545526 28 14.69483107042996 24.747781458836176 34.64322446933322 25.91416300140064 29 22.442281750851496 26.443537675144587 26.168965748928848 24.94521482507507 30 19.723825865838343 30.71419711292465 29.14752200451719 20.414455016719817 31 22.26862308316493 25.13799661985808 26.619909759513753 25.97347053746324 32 25.230381997384782 33.5479086017893 21.317376720435387 19.904332680390525 33 21.983714331491655 26.3944377542213 23.04827814329941 28.573569770987632 34 21.019030095667322 25.966493180279404 27.657856245768365 25.356620478284913 35 19.34511042313795 31.519952657339406 22.496808505139988 26.63812841438266 36 23.722109952812392 29.44871125628608 25.58687326535148 21.242305525550048 37 20.058480590025997 28.31191887659381 31.047301313293673 20.58229922008652 38 21.90205341037714 28.61414181090845 27.474636014533576 22.009168764180835 39 26.35231519048185 22.94064594822284 26.651437077159233 24.055601784136073 40 20.81113069365267 29.33888248579979 26.88995932459182 22.960027495955718 41 21.12162308833334 26.07929378808474 22.188512685869043 30.610570437712877 42 20.909201325181023 25.732880924939145 29.65803197180114 23.699885778078695 43 27.637441015489735 22.153496689631645 25.871006755115438 24.338055539763186 44 21.63484647229989 21.60060573797181 30.245680499061933 26.518867290666364 45 19.6494007225441 19.980695978458055 27.708765111146715 32.66113818785113 46 26.15604471710693 23.531524733439113 28.02520118046547 22.28722936898849 47 14.986975599923507 23.650269015882532 38.51371955158851 22.84903583260545 48 19.43568685620959 25.748903004398322 27.45241183979988 27.362998299592213 49 20.98168831370198 20.322715690784204 35.88700299251097 22.808593003002848 50 24.283399575156473 19.208147485825627 28.195629590196553 28.312823348821343 51 19.867766160334497 19.343301478682882 25.47278055436395 35.31615180661867 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 139.0 1 368.5 2 598.0 3 1717.5 4 2837.0 5 1944.5 6 1052.0 7 1116.5 8 1181.0 9 1252.5 10 1324.0 11 1455.5 12 1587.0 13 1505.0 14 1423.0 15 1334.0 16 1245.0 17 1407.5 18 1570.0 19 1424.0 20 1278.0 21 1381.5 22 1485.0 23 2010.5 24 2536.0 25 2950.5 26 3739.5 27 4114.0 28 4653.0 29 5192.0 30 6162.5 31 7133.0 32 8623.5 33 10114.0 34 11391.0 35 12668.0 36 13547.5 37 14427.0 38 16809.0 39 19191.0 40 22963.5 41 26736.0 42 33523.0 43 40310.0 44 93146.5 45 145983.0 46 129506.0 47 113029.0 48 111114.5 49 109200.0 50 86337.0 51 63474.0 52 53138.5 53 42803.0 54 37691.5 55 32580.0 56 29870.5 57 27161.0 58 25056.5 59 22952.0 60 19213.0 61 15474.0 62 13839.0 63 12204.0 64 11010.5 65 9817.0 66 8135.5 67 6454.0 68 5301.0 69 4148.0 70 3435.5 71 2723.0 72 2293.0 73 1863.0 74 1566.0 75 953.0 76 637.0 77 502.5 78 368.0 79 279.5 80 191.0 81 122.0 82 53.0 83 44.0 84 35.0 85 20.0 86 5.0 87 3.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 773932.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.229428873609155 #Duplication Level Percentage of deduplicated Percentage of total 1 68.48759785293976 20.70340968019789 2 13.056057203191033 7.893543051872716 3 5.453235478005036 4.945445820401857 4 2.8573860732188816 3.4550859625924613 5 1.6891738178371518 2.5531379890735497 6 1.1865938272477625 2.1522032221589944 7 0.8283441157016082 1.7528258669932102 8 0.6648639480494873 1.607876594255116 9 0.56162079220315 1.5279728212660633 >10 4.9967806939752615 27.38590758260481 >50 0.11823489759053477 2.4997038454394604 >100 0.08241921684354318 4.799436597057336 >500 0.008630284486234888 1.731778334534645 >1k 0.005178170691740933 3.2860219964795303 >5k 0.002157571121558722 4.220524857929229 >10k+ 0.0017260568972469776 9.485125777143129 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGC 24405 3.153377816138886 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCG 19385 2.5047420186786433 No Hit GAATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC 16396 2.1185323775215394 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 12528 1.6187468666497833 No Hit CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 7725 0.9981497082431015 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGACAGT 7134 0.921786410175571 No Hit CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT 6746 0.8716528067065323 No Hit GAACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCT 5425 0.7009659763390065 No Hit TCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 5325 0.6880449445170893 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATGACAGTCGTA 4418 0.5708511858923005 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTC 4227 0.5461720151124388 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCT 3992 0.5158075903309334 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAATGACAGTCGT 1681 0.21720254492642765 No Hit CGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 1611 0.20815782265108562 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1606 0.20751177105998975 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATG 1552 0.20053441387615448 No Hit TGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCTT 1419 0.18334944155300464 Illumina Single End Adapter 1 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 1398 0.18063602487040206 No Hit TTCCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCT 1162 0.1501423897706775 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTAT 1116 0.14419871513259563 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1009 0.13037321108314426 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAATGACAG 989 0.1277890047187608 No Hit TGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 921 0.11900270307985714 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCC 906 0.11706454830656957 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 889 0.11486797289684365 No Hit TTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 853 0.11021640144095346 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9944026090147455 0.0 2 0.0 0.0 0.0 4.784916504292367 0.0 3 0.0 0.0 0.0 5.872479752743135 0.0 4 0.0 0.0 0.0 8.014399197862344 0.0 5 0.0 0.0 0.0 12.428998930138565 0.0 6 0.0 0.0 0.0 13.607267821979192 0.0 7 0.0 0.0 0.0 15.274210137324726 0.0 8 0.0 0.0 0.0 17.435769550813248 0.0 9 0.0 0.0 0.0 18.121617919920613 0.0 10 0.0 0.0 0.0 22.166805352408222 0.0 11 0.0 0.0 0.0 24.917046975703293 0.0 12 0.0 0.0 0.0 30.477613020265345 0.0 13 0.0 0.0 0.0 31.51866055415721 0.0 14 0.0 0.0 0.0 31.950093806691026 0.0 15 0.0 0.0 0.0 33.02383155109234 0.0 16 0.0 0.0 0.0 34.16514629192229 0.0 17 0.0 0.0 0.0 35.59149899474372 0.0 18 0.0 0.0 0.0 37.026121157931186 0.0 19 0.0 0.0 0.0 39.01492637596068 0.0 20 0.0 0.0 0.0 40.18337528361665 0.0 21 0.0 0.0 0.0 41.4790963547185 0.0 22 1.292103182191717E-4 0.0 0.0 42.95997581182843 0.0 23 1.292103182191717E-4 0.0 0.0 44.22081009701111 0.0 24 1.292103182191717E-4 0.0 0.0 45.270773142860094 0.0 25 1.292103182191717E-4 0.0 0.0 46.11645467560457 0.0 26 1.292103182191717E-4 0.0 0.0 46.91006445010673 0.0 27 1.292103182191717E-4 0.0 0.0 47.79954828072751 0.0 28 1.292103182191717E-4 0.0 0.0 48.56395652331213 0.0 29 2.584206364383434E-4 0.0 0.0 49.48018688980427 0.0 30 2.584206364383434E-4 0.0 0.0 50.49151605050573 0.0 31 2.584206364383434E-4 0.0 0.0 51.30773763069624 0.0 32 2.584206364383434E-4 0.0 0.0 52.047079071546335 0.0 33 2.584206364383434E-4 0.0 0.0 52.80644811172041 0.0 34 2.584206364383434E-4 0.0 0.0 53.64528149759927 0.0 35 2.584206364383434E-4 0.0 0.0 54.546911098132654 0.0 36 2.584206364383434E-4 0.0 0.0 55.284314384209466 0.0 37 2.584206364383434E-4 0.0 0.0 56.02753213460614 0.0 38 3.876309546575151E-4 0.0 0.0 56.81274323842405 0.0 39 3.876309546575151E-4 0.0 0.0 58.106526154752615 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACC 35 1.2112469E-7 45.000004 27 GTAGCGG 30 2.1645792E-6 45.000004 2 TTCCACG 35 1.2112469E-7 45.000004 18 TACTCCG 35 1.2112469E-7 45.000004 1 AACACGT 30 2.1645792E-6 45.000004 41 GTCGAAT 20 7.0318574E-4 45.0 43 TTAGCCG 25 3.889621E-5 45.0 37 CGCATAG 25 3.889621E-5 45.0 27 CGACAAT 20 7.0318574E-4 45.0 20 TAGCCGA 25 3.889621E-5 45.0 38 CCGTACA 20 7.0318574E-4 45.0 30 ATCGGTT 20 7.0318574E-4 45.0 18 TAGGATA 25 3.889621E-5 45.0 17 TACGGCT 2820 0.0 43.08511 7 ATACGGC 5335 0.0 42.216496 6 TCGGCGT 80 0.0 42.1875 4 AATGATC 625 0.0 42.120003 2 ACGGCTG 2890 0.0 42.119377 8 GATACGG 5385 0.0 41.8663 5 TGATACG 5400 0.0 41.75 4 >>END_MODULE