##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933798.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 376477 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.680862310313778 31.0 16.0 33.0 16.0 34.0 2 27.886240062473934 31.0 25.0 33.0 16.0 34.0 3 28.77093155757191 31.0 28.0 34.0 16.0 34.0 4 32.32968547879419 35.0 28.0 37.0 25.0 37.0 5 33.74463513043293 35.0 33.0 37.0 28.0 37.0 6 32.88471274473606 35.0 32.0 37.0 26.0 37.0 7 33.54999375791881 35.0 32.0 35.0 29.0 37.0 8 33.331728100255795 35.0 33.0 37.0 28.0 37.0 9 34.779864374184875 37.0 32.0 39.0 29.0 39.0 10 33.69525894012118 35.0 32.0 39.0 27.0 39.0 11 34.06794306159473 35.0 32.0 39.0 27.0 39.0 12 34.13989699237935 37.0 32.0 39.0 26.0 39.0 13 34.57091668282524 37.0 33.0 39.0 27.0 39.0 14 34.428520201765316 37.0 32.0 39.0 25.0 40.0 15 34.887477853892804 37.0 32.0 39.0 27.0 40.0 16 34.39489796189409 36.0 32.0 39.0 27.0 40.0 17 34.34894296331515 36.0 32.0 38.0 27.0 40.0 18 34.34317368657315 36.0 32.0 39.0 27.0 40.0 19 34.043150046350775 36.0 32.0 39.0 25.0 40.0 20 34.94064179219448 37.0 33.0 39.0 27.0 40.0 21 34.346557691439315 37.0 32.0 39.0 25.0 40.0 22 35.39654480884622 37.0 34.0 39.0 28.0 40.0 23 36.17690058091198 38.0 34.0 39.0 30.0 40.0 24 36.326253662242316 38.0 35.0 40.0 31.0 40.0 25 34.365801894936475 37.0 32.0 39.0 25.0 40.0 26 34.94785073191722 37.0 33.0 39.0 27.0 40.0 27 35.64161954116719 37.0 34.0 39.0 30.0 40.0 28 35.80991136244711 38.0 34.0 40.0 30.0 40.0 29 36.29691853685617 38.0 35.0 40.0 30.0 41.0 30 34.382984883538704 37.0 33.0 39.0 25.0 40.0 31 35.155310948610406 37.0 33.0 39.0 28.0 40.0 32 35.38997335826624 37.0 34.0 39.0 30.0 40.0 33 35.99186670102025 38.0 35.0 40.0 30.0 40.0 34 36.33494210801722 38.0 35.0 40.0 30.0 41.0 35 36.51649104726185 38.0 35.0 40.0 31.0 41.0 36 36.42020893706654 38.0 35.0 40.0 30.0 41.0 37 36.77372854118578 38.0 35.0 40.0 32.0 41.0 38 36.17607450123115 38.0 35.0 40.0 30.0 41.0 39 36.17733885469763 38.0 35.0 40.0 30.0 41.0 40 35.61149021055735 37.0 34.0 40.0 30.0 41.0 41 35.2023178042749 37.0 33.0 39.0 29.0 41.0 42 36.23373805039883 38.0 35.0 40.0 31.0 41.0 43 36.31307888662521 38.0 35.0 40.0 31.0 41.0 44 36.79585207064442 38.0 35.0 40.0 32.0 41.0 45 37.014022104936025 39.0 35.0 40.0 33.0 41.0 46 36.819327608326674 39.0 35.0 40.0 32.0 41.0 47 36.57945372492875 38.0 35.0 40.0 31.0 41.0 48 36.70703655203372 38.0 35.0 40.0 32.0 41.0 49 36.94007070817075 39.0 35.0 40.0 33.0 41.0 50 36.79576972829682 39.0 35.0 40.0 32.0 41.0 51 36.07195658698938 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 9.0 11 8.0 12 12.0 13 8.0 14 17.0 15 20.0 16 46.0 17 97.0 18 176.0 19 281.0 20 423.0 21 634.0 22 912.0 23 1221.0 24 1727.0 25 2265.0 26 3180.0 27 4371.0 28 6069.0 29 8555.0 30 12254.0 31 17478.0 32 24426.0 33 32468.0 34 39436.0 35 50837.0 36 62933.0 37 64715.0 38 38264.0 39 3630.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.45788188919908 3.6012824156588583 45.276072641887815 16.66476305325425 2 17.662964802630704 18.14081603922683 44.27574592870215 19.92047322944031 3 18.094066835424208 18.35039059491018 45.550458593752076 18.005083975913536 4 17.91849170068822 3.68973403421723 55.89531365793926 22.49646060715528 5 27.092757326476786 4.635608549791886 44.15834167824329 24.11329244548804 6 19.258015761919054 16.07721056000765 46.85093644498867 17.813837233084623 7 69.25097681930104 1.6566749097554432 23.235948012760407 5.856400258183102 8 66.59370957588379 12.148683717730432 12.037919979175355 9.219686727210426 9 62.21734661081554 3.9248081556110996 14.127025024105059 19.73082020946831 10 38.78058951808477 22.226058962433296 21.422557022075715 17.57079449740622 11 31.666476305325425 21.412197823505817 26.543985422748268 20.37734044842049 12 23.892827450282486 17.925132212592004 32.28404391237712 25.897996424748392 13 22.157794500062423 21.794691309163643 37.770700467757656 18.27681372301628 14 20.09020471370097 26.208772381845375 29.01292774857428 24.688095155879378 15 15.199866127280021 23.203542314669953 40.06141145408617 21.535180103963857 16 16.840338187990238 23.44844439368142 28.83283706574372 30.87838035258462 17 17.85341468403116 25.050135864873553 31.936081088618963 25.160368362476326 18 17.116849103663704 23.136605954679833 33.93540641260954 25.81113852904693 19 18.421045641566415 25.69824982668264 29.430483137084074 26.450221394666872 20 20.99278309166297 24.79832765348215 36.01733970468315 18.19154955017172 21 22.199231294342017 29.46182635326992 28.476374386748727 19.862567965639336 22 17.9240697306874 22.746940716165927 31.742443761504685 27.586545791641985 23 19.309280513816248 27.683497265437197 28.813181150508534 24.194041070238022 24 23.08985675087721 21.453368997309262 27.097272874571352 28.359501377242168 25 16.603404723263306 30.03237913604284 25.384552044348 27.979664096345857 26 17.49137397503699 22.1426541329218 32.9730634275135 27.392908464527714 27 20.800739487405608 25.56783017289237 29.215064930925394 24.416365408776635 28 17.72060444595553 23.07020083564202 35.05738730387248 24.151807414529973 29 23.38522672035742 18.5966207763024 32.74462981802341 25.273522685316767 30 19.701070716139366 24.217946913091637 36.1424469489504 19.9385354218186 31 27.21759895026788 24.14304193881698 24.779202979199262 23.860156131715883 32 25.53967440242033 26.588344042265533 25.987244904735217 21.88473665057892 33 19.361873368094198 24.34491350069194 27.957883217301454 28.335329913912403 34 23.54672396985739 24.52526980399865 29.5829492903949 22.345056935749064 35 17.489249011227777 21.845690440584683 31.051299282559093 29.613761265628447 36 21.765207436310853 26.118727040430095 32.12599972906711 19.990065794191942 37 22.257667799095294 22.433774174783586 35.514785763804966 19.793772262316157 38 24.916528765369463 24.74121925110963 26.68051434749002 23.661737636030885 39 25.948995556169436 26.224709610414447 28.977068984293865 18.849225849122256 40 19.34460803714437 21.322683723042843 33.620380527894135 25.712327711918658 41 18.278673066349338 31.258748874433234 24.823827219192673 25.638750840024755 42 19.92684812086794 20.692100712659737 30.215922885063364 29.165128281408958 43 23.355211606552327 24.116479891201852 27.02502410505821 25.50328439718761 44 21.157467786876754 19.902676657538176 32.93189225371005 26.007963301875016 45 21.245388164482822 18.64602618486654 29.293422971390022 30.81516267926062 46 27.28028538263958 21.990984841039428 29.67804142085705 21.050688355463944 47 15.708529339109692 19.742773130895113 41.33453039627919 23.214167133716003 48 20.198843488446837 23.57594222223403 29.67591645704784 26.549297832271296 49 20.442948706029853 17.807727962133143 37.472939913992086 24.276383417844915 50 23.499709145578613 18.89225636625876 30.684743025470347 26.923291462692276 51 19.075003253850834 18.397405419188956 28.184723103934633 34.342868223025576 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 44.0 1 166.5 2 289.0 3 821.0 4 1353.0 5 965.0 6 577.0 7 565.5 8 554.0 9 606.5 10 659.0 11 701.0 12 743.0 13 769.0 14 795.0 15 741.0 16 687.0 17 645.0 18 603.0 19 659.0 20 715.0 21 868.0 22 1021.0 23 1042.5 24 1064.0 25 1275.0 26 1802.5 27 2119.0 28 2406.0 29 2693.0 30 3418.0 31 4143.0 32 4674.0 33 5205.0 34 5757.0 35 6309.0 36 6875.5 37 7442.0 38 8851.5 39 10261.0 40 12074.0 41 13887.0 42 17044.5 43 20202.0 44 47635.5 45 75069.0 46 63879.5 47 52690.0 48 49994.5 49 47299.0 50 38031.5 51 28764.0 52 24903.0 53 21042.0 54 18447.5 55 15853.0 56 14467.5 57 13082.0 58 11977.5 59 10873.0 60 9808.0 61 8743.0 62 7520.5 63 6298.0 64 5595.0 65 4892.0 66 3979.0 67 3066.0 68 2505.5 69 1945.0 70 1705.0 71 1465.0 72 1226.5 73 988.0 74 838.5 75 553.0 76 417.0 77 318.0 78 219.0 79 173.5 80 128.0 81 104.5 82 81.0 83 51.0 84 21.0 85 11.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 376477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.771733164476984 #Duplication Level Percentage of deduplicated Percentage of total 1 65.94434611313876 18.31388783960005 2 14.52036145095062 8.06511207335117 3 5.838246027327157 4.864146324584929 4 2.898965144751876 3.22037145812674 5 1.655275316138648 2.298493219677391 6 1.0934502861869353 1.8220205745962736 7 0.7618179204635789 1.4809902804921886 8 0.6194111187076315 1.3761696246286819 9 0.5178354401960605 1.294306890141103 >10 5.911290229750441 32.31259007686135 >50 0.14539224603621656 2.7224692221839755 >100 0.07269612301810828 3.4182973980286406 >500 0.007966698412943373 1.5282776230992128 >1k 0.008962535714561294 6.626961347213777 >5k 0.0019916746032358434 4.164736287776157 >10k+ 0.0019916746032358434 6.491169759638368 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGC 12623 3.352927270457425 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCG 10848 2.8814509252889287 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC 9467 2.5146290477240307 No Hit GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 5592 1.485349702637877 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGGTACAT 4205 1.1169341022160717 No Hit CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 3829 1.0170608031831958 No Hit CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT 2759 0.7328468937013417 No Hit GAACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT 2726 0.7240814179883499 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGGTACATCGTA 2693 0.7153159422753581 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTC 2234 0.5933961437219273 No Hit TCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC 2144 0.5694903008683133 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCT 2138 0.5678965780114058 No Hit TGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCTT 1234 0.3277756675706617 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTGGTACATCGT 923 0.24516769948761807 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATG 809 0.21488696520637385 No Hit CGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 797 0.21169951949255866 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 712 0.18912177901970106 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTAT 609 0.16176286997612072 No Hit TCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 606 0.16096600854766693 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTTGGTACA 541 0.14370067759783467 No Hit TGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG 529 0.14051323188401948 No Hit TTCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT 390 0.10359198569899356 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGC 385 0.10226388331823724 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8308608494011587 0.0 2 0.0 0.0 0.0 4.125351615105306 0.0 3 0.0 0.0 0.0 5.107616135912685 0.0 4 0.0 0.0 0.0 7.018755461821041 0.0 5 0.0 0.0 0.0 11.409196312125308 0.0 6 0.0 0.0 0.0 12.368617471983681 0.0 7 0.0 0.0 0.0 13.87123250557139 0.0 8 0.0 0.0 0.0 15.897119877177092 0.0 9 0.0 0.0 0.0 16.496359671374346 0.0 10 0.0 0.0 0.0 20.707772320752664 0.0 11 0.0 0.0 0.0 22.948015416612435 0.0 12 0.0 0.0 0.0 28.543045126262694 0.0 13 0.0 0.0 0.0 29.49131022612271 0.0 14 0.0 0.0 0.0 29.89638145225339 0.0 15 0.0 0.0 0.0 31.05448672827291 0.0 16 0.0 0.0 0.0 32.151764915253786 0.0 17 0.0 0.0 0.0 33.370697280311944 0.0 18 0.0 0.0 0.0 34.66028469202634 0.0 19 0.0 0.0 0.0 36.74620229124223 0.0 20 0.0 0.0 0.0 37.849324128698434 0.0 21 0.0 0.0 0.0 39.028679042810055 0.0 22 0.0 0.0 0.0 40.34164105642576 0.0 23 0.0 0.0 0.0 41.50877742863442 0.0 24 0.0 0.0 0.0 42.444292745639174 0.0 25 0.0 0.0 0.0 43.232919939332284 0.0 26 0.0 0.0 0.0 43.94000164684695 0.0 27 0.0 0.0 0.0 44.61334955389041 0.0 28 0.0 0.0 0.0 45.35735250759011 0.0 29 0.0 0.0 0.0 46.118089551287326 0.0 30 0.0 0.0 0.0 46.96595011116217 0.0 31 0.0 0.0 0.0 47.70012510724427 0.0 32 0.0 0.0 0.0 48.37772294190614 0.0 33 0.0 0.0 0.0 49.05638325847263 0.0 34 0.0 0.0 0.0 49.70051291313945 0.0 35 0.0 0.0 0.0 50.38926680779968 0.0 36 0.0 0.0 0.0 51.06898960627077 0.0 37 0.0 0.0 0.0 51.71365050188989 0.0 38 0.0 0.0 0.0 52.41063863131081 0.0 39 0.0 0.0 0.0 53.07415858073667 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCCTTA 25 3.8857906E-5 45.0 20 CAGGTAA 25 3.8857906E-5 45.0 24 GGTACTC 20 7.0272374E-4 45.0 9 CTCGTCG 20 7.0272374E-4 45.0 1 TTTACGA 35 1.2090095E-7 45.0 15 CGTGCGC 20 7.0272374E-4 45.0 17 CTCCCAT 20 7.0272374E-4 45.0 26 CGACCGG 20 7.0272374E-4 45.0 2 AATGGTG 20 7.0272374E-4 45.0 15 CGATTCA 20 7.0272374E-4 45.0 10 TGCGGAT 20 7.0272374E-4 45.0 4 GCTCTCA 20 7.0272374E-4 45.0 28 GCACACG 25 3.8857906E-5 45.0 12 TCGCTTC 20 7.0272374E-4 45.0 14 CGAGGGA 20 7.0272374E-4 45.0 4 TCGCTAG 35 1.2090095E-7 45.0 32 CAAGCGT 25 3.8857906E-5 45.0 31 ATGCGAC 20 7.0272374E-4 45.0 13 TACTAGA 20 7.0272374E-4 45.0 15 TTACGAT 25 3.8857906E-5 45.0 16 >>END_MODULE