##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933796.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1208119 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.016055537575355 31.0 16.0 33.0 16.0 34.0 2 28.395146504607577 31.0 25.0 33.0 16.0 34.0 3 29.369855949620856 31.0 28.0 34.0 16.0 34.0 4 32.7199787438158 35.0 32.0 37.0 28.0 37.0 5 33.839898221946676 35.0 33.0 37.0 28.0 37.0 6 33.127179524533595 35.0 33.0 37.0 28.0 37.0 7 33.49726558393668 35.0 32.0 35.0 29.0 37.0 8 33.615292036628844 35.0 35.0 37.0 28.0 37.0 9 34.72752601357979 37.0 32.0 39.0 28.0 39.0 10 33.652303291314844 35.0 32.0 39.0 27.0 39.0 11 34.11799665430309 35.0 32.0 39.0 27.0 39.0 12 34.35368535715438 37.0 32.0 39.0 27.0 39.0 13 34.77582754678968 37.0 34.0 39.0 29.0 39.0 14 34.602049963621134 37.0 33.0 39.0 26.0 40.0 15 35.032232751906065 37.0 33.0 39.0 27.0 40.0 16 34.614795396811076 36.0 32.0 39.0 27.0 40.0 17 34.465419383355446 36.0 32.0 39.0 27.0 40.0 18 34.45210612530719 37.0 32.0 39.0 27.0 40.0 19 34.27262877249675 37.0 32.0 39.0 25.0 40.0 20 35.28651813273361 37.0 34.0 39.0 29.0 40.0 21 34.548892948459546 37.0 32.0 39.0 25.0 40.0 22 35.516102304491525 37.0 34.0 39.0 29.0 40.0 23 36.33853535951342 38.0 35.0 40.0 31.0 40.0 24 36.457454108411504 38.0 35.0 40.0 31.0 41.0 25 34.32382488811119 37.0 32.0 39.0 25.0 40.0 26 35.06985487356792 37.0 33.0 39.0 27.0 40.0 27 35.70257234593612 37.0 34.0 39.0 30.0 40.0 28 35.90460873473557 38.0 34.0 40.0 30.0 41.0 29 36.38113050121718 38.0 35.0 40.0 30.0 41.0 30 34.07889537371732 37.0 32.0 39.0 24.0 40.0 31 34.93214244623253 37.0 33.0 39.0 27.0 40.0 32 35.397481539484104 37.0 34.0 39.0 30.0 40.0 33 36.23939198042577 38.0 35.0 40.0 30.0 40.0 34 36.517215605416354 38.0 35.0 40.0 31.0 41.0 35 36.62884285405659 38.0 35.0 40.0 31.0 41.0 36 36.62255291076458 38.0 35.0 40.0 31.0 41.0 37 36.724960041188 39.0 35.0 40.0 31.0 41.0 38 36.31723447772943 38.0 35.0 40.0 30.0 41.0 39 36.273555833489915 38.0 35.0 40.0 31.0 41.0 40 35.86774067786369 38.0 34.0 40.0 30.0 41.0 41 35.394753331418514 37.0 34.0 40.0 28.0 41.0 42 36.18792354064459 38.0 35.0 40.0 31.0 41.0 43 36.30850272200007 38.0 35.0 40.0 31.0 41.0 44 36.71578048188962 39.0 35.0 40.0 32.0 41.0 45 36.924840185445305 39.0 35.0 40.0 32.0 41.0 46 36.65718774392258 38.0 35.0 40.0 32.0 41.0 47 36.471917915370916 38.0 35.0 40.0 31.0 41.0 48 36.51514875604142 38.0 35.0 40.0 31.0 41.0 49 36.70992261523906 39.0 35.0 40.0 32.0 41.0 50 36.537366766022224 38.0 35.0 40.0 31.0 41.0 51 35.79547544571354 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 11.0 10 18.0 11 20.0 12 39.0 13 46.0 14 59.0 15 83.0 16 143.0 17 247.0 18 516.0 19 1016.0 20 1591.0 21 2094.0 22 3049.0 23 3917.0 24 5429.0 25 7566.0 26 10388.0 27 14047.0 28 18749.0 29 26799.0 30 37210.0 31 52394.0 32 72878.0 33 96949.0 34 124592.0 35 164469.0 36 204776.0 37 215648.0 38 129346.0 39 14027.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.80092358451444 3.9767605674606554 46.49376427322143 17.728551574803475 2 18.09432680058835 13.625147853812415 46.90258161654605 21.377943729053182 3 18.44271963275141 13.492958888983619 48.25261418784077 19.811707290424206 4 18.288595742637938 4.157620234430548 54.670690552834614 22.883093470096902 5 24.670996814055567 5.156031814746727 45.60717942520563 24.565791945992075 6 20.667583243041456 13.301835332446554 48.416091461188834 17.614489963323148 7 74.67103820070705 1.963134426327208 18.466806663913076 4.899020709052667 8 73.54797002613154 9.408344707764716 9.808719174187312 7.2349660919164425 9 68.24782989092962 4.463881455386431 12.050634084887333 15.237654568796616 10 36.85704802258718 24.05905378526453 21.54613908067003 17.53775911147826 11 29.179161986526164 23.805270838385955 26.397482367217133 20.618084807870748 12 24.124030828088955 19.69946669160902 31.599205045198364 24.577297435103663 13 23.297787717931758 21.741897942172915 35.73712523352418 19.223189106371144 14 20.940404049601074 25.221273732140624 28.96287534588894 24.875446872369363 15 16.67186758920272 24.792259702893507 37.15602519288249 21.379847515021286 16 18.8363066883312 23.694106292509264 29.13835474816636 28.331232270993173 17 18.616046929151846 25.344771500158508 32.27438687745165 23.764794693238002 18 18.42939313097468 23.54486602727049 32.678568915810445 25.347171925944384 19 19.73323819921713 25.733806024075445 30.08834394625033 24.4446118304571 20 21.978215722126713 25.183363559384464 34.533104768652755 18.305315949836068 21 23.53907189606322 27.9359069760512 28.55836221431829 19.96665891356729 22 20.11349875302019 23.389748857521486 30.441703176591044 26.055049212867274 23 19.48856031566427 27.804545744252014 28.767447577597906 23.939446362485814 24 22.70620692166914 22.664654723582693 28.14192972712125 26.487208627626913 25 19.56438066117659 28.529226011676002 25.545331213233137 26.361062113914276 26 21.026322738074644 24.23544369387453 28.72423991345223 26.013993654598593 27 20.641095786093917 28.49768938324784 26.62891652229623 24.232298308362008 28 17.21461213671832 25.331279451775863 31.246176908069483 26.20793150343633 29 22.484953882854256 24.68440608913526 26.78651689113407 26.04412313687642 30 19.120798530608326 28.209886608852276 27.80189699855726 24.867417861982137 31 21.256432520306358 28.64303930324745 23.655782253238296 26.444745923207897 32 20.921200643314112 33.89707470870005 22.935240650962363 22.24648399702347 33 18.19042660532613 28.124464560196472 23.517302517384465 30.16780631709294 34 22.51781488412979 27.955027609035206 25.582744746171528 23.94441276066348 35 18.646590277944476 30.258774177047126 24.2869286883163 26.8077068566921 36 22.325366954745352 28.853035172859627 23.52880800649605 25.292789865898975 37 17.077125680500018 32.95734940018326 28.035897126028146 21.929627793288574 38 18.05310569571375 29.13736146853083 23.590225797293147 29.219307038462272 39 20.303049616800994 31.15496072820641 25.956962848858435 22.585026806134163 40 19.966576140264326 27.410958688672228 26.68180866288834 25.940656508175103 41 17.986390413527147 32.791968340867086 24.241734464899565 24.979906780706205 42 18.67961682582593 29.09018068584303 27.928209058875826 24.30199342945521 43 21.974325376887542 27.57062839008409 25.12467728758508 25.330368945443286 44 20.550707339260455 24.59062393688039 28.21435636721217 26.64431235664699 45 20.124507602314008 22.10427946253639 26.580494140064015 31.19071879508558 46 23.539402989275064 27.393576295050405 25.86392565633021 23.20309505934432 47 16.515508819909297 25.551704757561133 33.7648029705683 24.167983451961273 48 18.763052315210672 27.68270344229335 26.641415291043348 26.912828951452628 49 18.753119518855343 24.1307354656288 32.319001687747644 24.797143327768207 50 21.241285005864487 23.63475783428619 27.542568240380294 27.581388919469024 51 18.699565191839547 22.98771892503967 25.79125069633041 32.52146518679037 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 233.0 1 743.0 2 1253.0 3 2769.0 4 4285.0 5 3108.0 6 1931.0 7 1907.0 8 1883.0 9 1853.5 10 1824.0 11 1916.5 12 2009.0 13 1933.5 14 1858.0 15 1998.5 16 2139.0 17 2135.5 18 2132.0 19 2298.5 20 2465.0 21 2762.5 22 3060.0 23 3625.0 24 4190.0 25 5311.5 26 7825.5 27 9218.0 28 11016.5 29 12815.0 30 14845.0 31 16875.0 32 19329.0 33 21783.0 34 24717.0 35 27651.0 36 30548.0 37 33445.0 38 37081.5 39 40718.0 40 46482.5 41 52247.0 42 60095.0 43 67943.0 44 127927.5 45 187912.0 46 167759.0 47 147606.0 48 144026.0 49 140446.0 50 116725.0 51 93004.0 52 81238.5 53 69473.0 54 61745.0 55 54017.0 56 49712.0 57 45407.0 58 42457.5 59 39508.0 60 35940.5 61 32373.0 62 29195.0 63 26017.0 64 22674.5 65 19332.0 66 15700.5 67 12069.0 68 9942.0 69 7815.0 70 6882.5 71 5950.0 72 4912.0 73 3874.0 74 3053.5 75 1817.5 76 1402.0 77 996.5 78 591.0 79 502.0 80 413.0 81 298.0 82 183.0 83 121.5 84 60.0 85 48.0 86 36.0 87 19.0 88 2.0 89 1.5 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 1.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1208119.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.079390199177148 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17320197321165 21.10767123677901 2 12.489351115690468 7.513441310867641 3 4.842245506117818 4.369553760561897 4 2.4463349963039267 2.943370596469136 5 1.4547904112207626 2.187960421856535 6 0.9474225189474873 1.7098734978545267 7 0.6894252139603632 1.451624301670547 8 0.5225989782359658 1.257556686724072 9 0.4377511258948601 1.1850558233328556 >10 5.78524077696892 36.77855900260752 >50 0.13682826759908104 2.7125954204103433 >100 0.0650755877670744 3.7782658685752604 >500 0.0036153104303351963 0.7408971326845863 >1k 0.0036153104303351963 2.334198215019837 >5k 0.0011124032093339066 2.1523408856242976 >10k+ 0.0013905040116673833 7.77703583896195 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC 29161 2.4137522876471604 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG 23315 1.929859558536866 No Hit GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC 18385 1.5217871749388927 No Hit GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 11920 0.9866577712957085 No Hit CCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 10189 0.8433771838701319 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACACAAAT 8774 0.7262529601802472 No Hit CTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCT 6253 0.5175814634154418 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGACACAAATCGTA 5549 0.4593090581308629 No Hit GAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT 5154 0.42661360346124844 No Hit TCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC 4531 0.3750458357165147 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTC 4370 0.3617193339397857 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCT 4199 0.34756509913344624 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2118 0.17531385567150257 No Hit CGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTG 2055 0.17009913758495646 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGACACAAATCGT 1903 0.15751759553487696 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGACACAAATCGTATG 1701 0.140797388336745 No Hit TGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGCTT 1487 0.12308390150308042 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGACACAAATCGTAT 1252 0.1036321753072338 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6265939034151438 0.0 2 0.0 0.0 0.0 3.004339804274248 0.0 3 0.0 0.0 0.0 3.72860620518343 0.0 4 0.0 0.0 0.0 5.00728818932572 0.0 5 0.0 0.0 0.0 7.943008925445258 0.0 6 0.0 0.0 0.0 8.731755729361097 0.0 7 0.0 0.0 0.0 9.838434789950329 0.0 8 0.0 0.0 0.0 11.30666763787342 0.0 9 0.0 0.0 0.0 11.783607409534987 0.0 10 0.0 0.0 0.0 14.854248629481036 0.0 11 0.0 0.0 0.0 16.81862465535266 0.0 12 8.277330296104937E-5 0.0 0.0 21.045443371058646 0.0 13 8.277330296104937E-5 0.0 0.0 21.800998080487105 0.0 14 8.277330296104937E-5 0.0 0.0 22.090539094244853 0.0 15 8.277330296104937E-5 0.0 0.0 22.93755830344527 0.0 16 8.277330296104937E-5 0.0 0.0 23.804029238841537 0.0 17 8.277330296104937E-5 0.0 0.0 24.886704041572063 0.0 18 8.277330296104937E-5 0.0 0.0 25.919632089222997 0.0 19 8.277330296104937E-5 0.0 0.0 27.475687411587767 0.0 20 8.277330296104937E-5 0.0 0.0 28.397864779876816 0.0 21 8.277330296104937E-5 0.0 0.0 29.5214295942701 0.0 22 8.277330296104937E-5 0.0 0.0 30.788688862603767 0.0 23 8.277330296104937E-5 0.0 0.0 31.956785713990094 0.0 24 8.277330296104937E-5 0.0 0.0 32.89957363471645 0.0 25 8.277330296104937E-5 0.0 0.0 33.73434239507863 0.0 26 8.277330296104937E-5 0.0 0.0 34.46622393986023 0.0 27 8.277330296104937E-5 0.0 0.0 35.18403402313845 0.0 28 8.277330296104937E-5 0.0 0.0 35.89025584400212 0.0 29 8.277330296104937E-5 0.0 0.0 36.65408788372669 0.0 30 8.277330296104937E-5 0.0 0.0 37.46228641383837 0.0 31 1.6554660592209874E-4 0.0 0.0 38.22976047889322 0.0 32 1.6554660592209874E-4 0.0 0.0 38.941528111055284 0.0 33 1.6554660592209874E-4 0.0 0.0 39.65313019661143 0.0 34 1.6554660592209874E-4 0.0 0.0 40.36324236271427 0.0 35 1.6554660592209874E-4 0.0 0.0 41.13617946576455 0.0 36 1.6554660592209874E-4 0.0 0.0 41.856721068040486 0.0 37 1.6554660592209874E-4 0.0 0.0 42.56658491423444 0.0 38 1.6554660592209874E-4 0.0 0.0 43.25989409983619 0.0 39 1.6554660592209874E-4 0.0 0.0 43.95692808407119 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 30 2.1655942E-6 45.000004 22 AGGCACG 70 0.0 45.000004 10 GTCGACG 20 7.0334296E-4 45.0 43 TTCACGA 20 7.0334296E-4 45.0 28 TTAACGC 65 0.0 44.999996 12 TACGGCT 3445 0.0 43.236576 7 ACGGCTG 3525 0.0 42.255318 8 ATACGGC 6750 0.0 41.93333 6 TGATACG 6765 0.0 41.840355 4 GATACGG 6800 0.0 41.625 5 ATGATAC 9520 0.0 41.265755 3 GAATGAT 9845 0.0 41.069073 1 TACGGGA 110 0.0 40.909092 4 AATGATA 9505 0.0 40.83377 2 TTTAGCG 105 0.0 40.714287 1 TATCCGG 50 1.0822987E-9 40.500004 2 TTTGTCG 185 0.0 40.135136 1 TGATACC 2835 0.0 40.07937 4 TACGGCG 3345 0.0 39.41704 7 GATACCT 2895 0.0 39.404144 5 >>END_MODULE