##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933792.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1082850 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.547239229810224 30.0 16.0 33.0 16.0 34.0 2 27.720352772775545 31.0 25.0 33.0 16.0 34.0 3 28.68634436902618 31.0 28.0 34.0 16.0 34.0 4 32.35607424851087 35.0 28.0 37.0 26.0 37.0 5 33.77106247402688 35.0 33.0 37.0 28.0 37.0 6 32.767535669760356 35.0 32.0 37.0 25.0 37.0 7 33.552228840559636 35.0 32.0 35.0 29.0 37.0 8 33.35179757122408 35.0 33.0 37.0 28.0 37.0 9 34.70347047144111 37.0 32.0 39.0 29.0 39.0 10 33.60398670175925 35.0 32.0 37.0 27.0 39.0 11 34.28327838574133 35.0 32.0 39.0 27.0 39.0 12 34.46068892275015 37.0 33.0 39.0 27.0 39.0 13 34.91247633559588 37.0 34.0 39.0 30.0 39.0 14 34.692484646996355 37.0 33.0 39.0 27.0 40.0 15 35.18067691739392 37.0 33.0 39.0 27.0 40.0 16 34.67966292653645 36.0 32.0 39.0 27.0 40.0 17 34.42604608209817 36.0 32.0 38.0 27.0 40.0 18 34.61798125317449 37.0 32.0 39.0 27.0 40.0 19 34.44507641870989 37.0 32.0 39.0 27.0 40.0 20 35.00708685413492 37.0 33.0 39.0 27.0 40.0 21 34.48413076603408 37.0 32.0 39.0 26.0 40.0 22 35.548705730248884 37.0 34.0 39.0 30.0 40.0 23 36.19304428129473 38.0 34.0 39.0 30.0 40.0 24 36.33365101352911 38.0 35.0 40.0 31.0 40.0 25 34.207733296393776 37.0 32.0 39.0 24.0 40.0 26 35.013155099967676 37.0 33.0 39.0 27.0 40.0 27 35.585218636006836 37.0 34.0 39.0 30.0 40.0 28 35.78980375859999 38.0 34.0 40.0 30.0 40.0 29 36.29547121023226 38.0 35.0 40.0 30.0 41.0 30 33.67416354989149 37.0 31.0 39.0 23.0 40.0 31 34.963310707854276 37.0 33.0 39.0 27.0 40.0 32 35.530896246017456 37.0 34.0 39.0 30.0 40.0 33 36.14761231934248 38.0 35.0 40.0 30.0 40.0 34 36.50052269474073 38.0 35.0 40.0 31.0 41.0 35 36.58544581428637 38.0 35.0 40.0 31.0 41.0 36 36.49009096366071 38.0 35.0 40.0 30.0 41.0 37 36.65839312924228 39.0 35.0 40.0 31.0 41.0 38 36.31258900124671 38.0 35.0 40.0 30.0 41.0 39 36.31500761878377 38.0 35.0 40.0 30.0 41.0 40 35.90401071247172 38.0 35.0 40.0 30.0 41.0 41 35.575950500992754 38.0 34.0 40.0 30.0 41.0 42 36.48382139723877 38.0 35.0 40.0 31.0 41.0 43 36.4963346723923 38.0 35.0 40.0 31.0 41.0 44 36.952843884194486 39.0 36.0 40.0 32.0 41.0 45 37.18043311631343 39.0 36.0 40.0 33.0 41.0 46 36.91342937618322 39.0 36.0 40.0 32.0 41.0 47 36.68983331024611 39.0 35.0 40.0 31.0 41.0 48 36.83244401348294 39.0 35.0 40.0 32.0 41.0 49 37.05617029136076 39.0 36.0 40.0 32.0 41.0 50 36.83250773421988 39.0 35.0 40.0 31.0 41.0 51 36.18482430622893 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 13.0 11 7.0 12 24.0 13 20.0 14 28.0 15 62.0 16 115.0 17 276.0 18 586.0 19 1042.0 20 1686.0 21 2417.0 22 2996.0 23 3771.0 24 4912.0 25 7016.0 26 9073.0 27 12224.0 28 16099.0 29 22995.0 30 32704.0 31 45959.0 32 64472.0 33 86574.0 34 113976.0 35 150799.0 36 184869.0 37 192886.0 38 114111.0 39 11130.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.56577549983839 3.451724615597728 49.21272567761001 11.76977420695387 2 17.29814840467285 19.17892598236136 44.328854411968415 19.194071200997367 3 16.1297501962414 19.17597081774946 45.986609410352315 18.707669575656833 4 15.393729510089116 3.16729002170199 60.20289052038602 21.236089947822876 5 27.244493697187977 4.1677055917255394 46.836403934062886 21.751396777023597 6 17.15888627233689 17.101352911298886 49.65803204506626 16.081728771297964 7 70.16484277600775 1.1106801496052083 23.80865309137923 4.915823983007804 8 69.7043911899155 12.61485893706423 10.271136353142172 7.4096135198781 9 66.111280417417 3.1746779332317496 11.407674193101537 19.306367456249713 10 36.95424112296255 17.942743685644363 25.472133721198688 19.630881470194396 11 28.778131781871913 24.37068846100568 24.97317264625756 21.878007110864846 12 20.00193932677656 18.913422911760634 33.632082005817985 27.452555755644823 13 21.68906127349125 22.646349909959827 39.14281756475966 16.52177125178926 14 21.549706792261166 26.657708823936833 28.628157177817798 23.164427205984207 15 15.567899524403195 25.211432793092303 38.650413261301196 20.57025442120331 16 16.19365563097382 24.427021286420096 27.910513921595786 31.4688091610103 17 16.996721614258668 26.938264764279445 33.010758646165215 23.05425497529667 18 16.977051299810686 24.23253451539918 33.36306967724062 25.42734450754952 19 18.350556402087083 27.659417278478088 28.735835988364038 25.254190331070784 20 18.772221452648104 25.9370180542088 37.606870757722675 17.68388973542042 21 21.600498684028256 29.96897077157501 29.085284203721663 19.34524634067507 22 17.661079558572286 23.277185205707163 31.87994643764141 27.181788798079143 23 18.041372304566654 30.10416955256961 28.43330101122039 23.42115713164335 24 21.638915823983005 23.856859214110912 26.848593988086993 27.65563097381909 25 17.13856951563005 31.847809022486956 24.75033476474119 26.2632866971418 26 19.231380154222652 24.531837281248556 30.77240615043635 25.464376414092442 27 20.840097889827767 28.55695618044974 26.58669252435702 24.01625340536547 28 16.269935817518586 24.84942512813409 35.73089532252851 23.149743731818813 29 23.07420233642702 21.790829754813686 30.108602299487465 25.026365609271828 30 17.98420833910514 31.882439857782703 30.31195456434409 19.821397238768064 31 20.365424574040723 23.928244909267214 31.497806713764604 24.20852380292746 32 22.15708546890151 30.1582860045251 28.035923719813454 19.64870480675994 33 16.76040079420049 26.200120053562358 26.597127949392807 30.442351202844346 34 24.737036523987623 22.977420695387174 31.185667451632266 21.099875328992933 35 21.135060257653414 26.03093687953087 25.98189961675209 26.85210324606363 36 22.661402779701714 24.71828969848086 28.266980652906682 24.353326868910745 37 16.42859121762017 27.153437687583693 36.749595973588214 19.668375121207923 38 18.53894814609595 27.805513228979084 30.423789075125825 23.23174954979914 39 19.22897908297548 22.969478690492682 36.837235074109984 20.96430715242185 40 22.34159855935725 26.59361869141617 29.512674885718244 21.552107863508336 41 19.607240153299163 24.081267026827355 29.83321789721568 26.478274922657803 42 23.797017130719862 20.459251050468673 31.63198965692386 24.111742161887612 43 22.357851964722723 21.59929814840467 26.45592649028028 29.586923396592326 44 19.657108556125042 22.46931707992797 31.947822874821075 25.92575148912592 45 20.017638638777303 19.66163365193702 30.581428637392065 29.739299071893615 46 25.68102691970264 24.134644687629866 29.24421665050561 20.94011174216189 47 15.976543380893013 22.67146880916101 39.59107909682781 21.76090871311816 48 19.822782472179895 24.4060580874544 29.939326776561852 25.83183266380385 49 20.117652491111418 18.92958396823198 37.51258253682413 23.440181003832482 50 22.22893290852842 18.539594588354806 31.257145495682686 27.974327007434084 51 19.74705637899986 18.763817703283003 28.493789536870295 32.99533638084684 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 66.0 1 249.5 2 433.0 3 1912.5 4 3392.0 5 2485.0 6 1578.0 7 1588.0 8 1598.0 9 1714.0 10 1830.0 11 1823.5 12 1817.0 13 1892.0 14 1967.0 15 1910.0 16 1853.0 17 1821.0 18 1789.0 19 1846.0 20 1903.0 21 2141.5 22 2380.0 23 2577.5 24 2775.0 25 3479.0 26 5021.5 27 5860.0 28 7793.5 29 9727.0 30 10938.5 31 12150.0 32 15062.5 33 17975.0 34 20566.0 35 23157.0 36 26574.0 37 29991.0 38 35023.5 39 40056.0 40 46923.5 41 53791.0 42 63470.0 43 73149.0 44 154407.0 45 235665.0 46 195597.5 47 155530.0 48 143082.0 49 130634.0 50 105003.5 51 79373.0 52 67824.0 53 56275.0 54 47792.5 55 39310.0 56 34261.0 57 29212.0 58 25512.0 59 21812.0 60 18916.5 61 16021.0 62 13366.0 63 10711.0 64 8403.5 65 6096.0 66 4784.0 67 3472.0 68 2853.0 69 2234.0 70 1756.0 71 1278.0 72 1033.5 73 789.0 74 697.0 75 420.0 76 235.0 77 153.5 78 72.0 79 74.5 80 77.0 81 52.0 82 27.0 83 14.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1082850.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.171740606701576 #Duplication Level Percentage of deduplicated Percentage of total 1 71.05083451138078 22.85829017789823 2 12.81154727737947 8.243395515566922 3 4.962440796822955 4.789510742745047 4 2.5405396235849165 3.269343270840847 5 1.4948040449751385 2.4045223996394216 6 0.9663948900773864 1.8654363436326933 7 0.7378296660793006 1.6616085240322747 8 0.5635676162221305 1.4504760930748422 9 0.4672050810019663 1.352772060851543 >10 4.203203475904926 25.855840268706622 >50 0.11588126698519896 2.5666094136680617 >100 0.07387397346120385 4.4863777235147815 >500 0.004924931563865889 1.024571013657357 >1k 0.0037661241370739156 2.431363961910258 >5k 0.001738211140187961 3.9593196789937393 >10k+ 0.0014485092834899673 11.780562811267405 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGC 39698 3.666066398854874 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCG 34014 3.141155284665466 No Hit GAATCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTC 26896 2.483815856305121 No Hit GCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 13135 1.2130027242923767 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGATTATGCT 12655 1.1686752551138202 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGATTATGCTCGTA 8397 0.7754536639423742 No Hit GAACTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 8055 0.7438703421526527 No Hit CCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 6721 0.6206769173939142 Illumina Single End Adapter 2 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTC 6681 0.6169829616290345 No Hit GAATGACTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCT 6376 0.5888165489218267 No Hit CTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCT 6251 0.5772729371565776 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGC 4996 0.46137507503347647 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGATTATGCTCGT 2949 0.272336888765757 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATG 2448 0.2260700928106386 No Hit CGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG 2228 0.20575333610380014 No Hit TGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTGCTT 1958 0.18081913469086208 Illumina Single End Adapter 2 (95% over 23bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTAT 1946 0.17971094796139817 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1908 0.17620168998476243 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGATTATGC 1572 0.14517246155977281 No Hit TCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG 1321 0.12199288913515262 No Hit GAATGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTT 1265 0.116821351064321 No Hit TTCCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCT 1235 0.11405088424066123 No Hit TGCTGTCTCTTATACACATCTGACGCGATTATGCTCGTATGCCGTCTTCTG 1199 0.11072632405226947 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.637299718335873 0.0 2 0.0 0.0 0.0 3.248464699635222 0.0 3 0.0 0.0 0.0 4.054116451955488 0.0 4 0.0 0.0 0.0 5.813178187191208 0.0 5 0.0 0.0 0.0 9.878653553123701 0.0 6 0.0 0.0 0.0 10.807314032414462 0.0 7 0.0 0.0 0.0 12.18026504132613 0.0 8 0.0 0.0 0.0 13.961859906727616 0.0 9 0.0 0.0 0.0 14.412614858937065 0.0 10 0.0 0.0 0.0 18.846008219051576 0.0 11 0.0 0.0 0.0 21.020178233365655 0.0 12 0.0 0.0 0.0 26.644687629865633 0.0 13 0.0 0.0 0.0 27.50510227640024 0.0 14 0.0 0.0 0.0 27.862123101075866 0.0 15 0.0 0.0 0.0 29.00410952578843 0.0 16 0.0 0.0 0.0 30.03379969524865 0.0 17 0.0 0.0 0.0 31.315232950085424 0.0 18 0.0 0.0 0.0 32.58586138430992 0.0 19 0.0 0.0 0.0 34.757999722953315 0.0 20 0.0 0.0 0.0 35.839497622015976 0.0 21 0.0 0.0 0.0 37.17957242462022 0.0 22 0.0 0.0 0.0 38.7247541210694 0.0 23 0.0 0.0 0.0 40.248510874082285 0.0 24 0.0 0.0 0.0 41.34552338735744 0.0 25 0.0 0.0 0.0 42.346862446322206 0.0 26 0.0 0.0 0.0 43.21660433116313 0.0 27 0.0 0.0 0.0 44.06011913007342 0.0 28 9.23488941219929E-5 0.0 0.0 44.98471625802281 0.0 29 1.846977882439858E-4 0.0 0.0 45.897492727524586 0.0 30 1.846977882439858E-4 0.0 0.0 46.83003186036847 0.0 31 1.846977882439858E-4 0.0 0.0 47.764510319988915 0.0 32 1.846977882439858E-4 0.0 0.0 48.649028027889365 0.0 33 1.846977882439858E-4 0.0 0.0 49.52126333287159 0.0 34 1.846977882439858E-4 0.0 0.0 50.39322159117145 0.0 35 1.846977882439858E-4 0.0 0.0 51.196656970032784 0.0 36 1.846977882439858E-4 0.0 0.0 52.01782333656554 0.0 37 1.846977882439858E-4 0.0 0.0 52.84305305443967 0.0 38 1.846977882439858E-4 0.0 0.0 53.67059149466685 0.0 39 2.770466823659787E-4 0.0 0.0 54.53146788567207 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGG 30 2.165385E-6 45.000004 2 CGCATGG 55 1.8189894E-12 45.000004 2 CATTCGG 55 1.8189894E-12 45.000004 3 GTCCGCG 30 2.165385E-6 45.000004 1 GGTACGA 25 3.890656E-5 45.0 8 ACCGGTG 80 0.0 45.0 17 GACCGGT 20 7.0331065E-4 45.0 14 TCGGCGT 25 3.890656E-5 45.0 4 CCGTACG 25 3.890656E-5 45.0 20 TCTACCG 25 3.890656E-5 45.0 1 TCGCTAG 20 7.0331065E-4 45.0 1 AGTTCGG 25 3.890656E-5 45.0 2 GCTAGCG 20 7.0331065E-4 45.0 1 CGTCCGC 20 7.0331065E-4 45.0 45 TCGGTTC 20 7.0331065E-4 45.0 35 CTAGCGG 40 6.8139343E-9 45.0 2 ACGGTAC 50 2.1827873E-11 45.0 15 TACGGCT 4395 0.0 43.873722 7 ACGGCTG 4435 0.0 43.478016 8 GCGACTG 955 0.0 43.350784 11 >>END_MODULE