##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933789.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 258397 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.61083913512928 30.0 16.0 33.0 16.0 34.0 2 27.86024992550223 31.0 25.0 33.0 16.0 34.0 3 28.833666799537145 31.0 28.0 34.0 16.0 34.0 4 32.38472969887421 35.0 30.0 35.0 26.0 37.0 5 33.72770968703197 35.0 33.0 37.0 28.0 37.0 6 32.772361908226486 35.0 32.0 37.0 25.0 37.0 7 33.4786588079583 35.0 32.0 35.0 29.0 37.0 8 33.364826217022646 35.0 33.0 37.0 28.0 37.0 9 34.63030143538818 37.0 32.0 39.0 28.0 39.0 10 33.84226984059413 35.0 32.0 39.0 27.0 39.0 11 34.2438611903389 35.0 32.0 39.0 27.0 39.0 12 34.362504208640196 37.0 32.0 39.0 27.0 39.0 13 34.723711962600184 37.0 34.0 39.0 28.0 39.0 14 34.40877409567449 37.0 32.0 39.0 25.0 40.0 15 34.89821863256926 37.0 32.0 39.0 27.0 40.0 16 34.35994225939156 36.0 32.0 39.0 27.0 40.0 17 34.41906833283668 36.0 32.0 38.0 27.0 40.0 18 34.25097814603111 36.0 32.0 39.0 27.0 40.0 19 33.956973184673195 36.0 32.0 39.0 25.0 40.0 20 34.99309976509015 37.0 33.0 39.0 27.0 40.0 21 34.5299945432803 37.0 32.0 39.0 26.0 40.0 22 35.55287019586141 37.0 34.0 39.0 29.0 40.0 23 36.281551256400036 38.0 34.0 40.0 31.0 40.0 24 36.38913377477293 38.0 35.0 40.0 31.0 40.0 25 34.17719245966478 37.0 32.0 39.0 24.0 40.0 26 35.07519437145168 37.0 33.0 39.0 27.0 40.0 27 35.45500528256907 37.0 34.0 39.0 30.0 40.0 28 35.55490195319605 38.0 34.0 39.0 29.0 40.0 29 36.16006764784421 38.0 35.0 40.0 30.0 41.0 30 33.61970533713627 37.0 31.0 39.0 23.0 40.0 31 34.648560161302186 37.0 32.0 39.0 26.0 40.0 32 35.2007801948165 37.0 34.0 39.0 29.0 40.0 33 35.93503020545904 38.0 35.0 39.0 30.0 40.0 34 36.18036587112079 38.0 35.0 40.0 30.0 41.0 35 36.24109413034981 38.0 35.0 40.0 30.0 41.0 36 36.258180242030676 38.0 35.0 40.0 30.0 41.0 37 36.343448259848216 38.0 35.0 40.0 30.0 41.0 38 35.85480868585935 38.0 34.0 40.0 30.0 41.0 39 35.914476561260386 38.0 34.0 40.0 30.0 41.0 40 35.51281942127811 38.0 34.0 40.0 28.0 41.0 41 35.03209015584546 37.0 33.0 40.0 27.0 41.0 42 35.81679740863864 38.0 34.0 40.0 30.0 41.0 43 35.944759420581505 38.0 35.0 40.0 30.0 41.0 44 36.37537200509294 38.0 35.0 40.0 31.0 41.0 45 36.61068820458442 38.0 35.0 40.0 31.0 41.0 46 36.353699926856734 38.0 35.0 40.0 31.0 41.0 47 36.004779467253876 38.0 34.0 40.0 30.0 41.0 48 36.11515613571365 38.0 35.0 40.0 31.0 41.0 49 36.299999612998604 38.0 35.0 40.0 31.0 41.0 50 36.00510841844139 38.0 35.0 40.0 30.0 41.0 51 35.29713580266025 37.0 34.0 39.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 7.0 12 14.0 13 9.0 14 8.0 15 12.0 16 37.0 17 92.0 18 149.0 19 262.0 20 407.0 21 532.0 22 709.0 23 863.0 24 1291.0 25 1819.0 26 2443.0 27 3383.0 28 4686.0 29 6314.0 30 8901.0 31 12347.0 32 17189.0 33 22440.0 34 28113.0 35 36130.0 36 42650.0 37 42419.0 38 22828.0 39 2337.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.51355859394653 3.9559282809010945 45.455636094846305 16.074877030306077 2 17.90965065383886 17.547804347573695 45.02529054129885 19.51725445728859 3 18.21035073936617 17.54664334338247 45.80006733824309 18.44293857900827 4 18.272270962898176 3.3804572034505043 56.163190749118606 22.184081084532714 5 26.505725685669724 4.6536917998273974 44.28650487428259 24.55407764022028 6 18.79433584755241 16.16233934604504 47.32949685948366 17.71382794691889 7 69.03485721583455 1.6188268439649065 23.582704133561922 5.763611806638623 8 66.72407187389946 12.008653351238598 11.775291508802347 9.491983266059592 9 61.727883837660656 4.739993111375132 14.102330909414585 19.429792141549633 10 34.44544634806132 26.663622255676344 20.85473128557994 18.036200110682397 11 29.667527099772826 22.80444432404401 27.1373119656962 20.390716610486965 12 23.851670104529077 17.51065221345449 33.381192506104945 25.256485175911486 13 21.96194228261164 22.4774281435156 36.976048483535024 18.584581090337736 14 19.036985723518463 27.09087179804719 28.473627789796318 25.398514688638024 15 14.17353916647639 23.31722117516844 40.62160164398193 21.88763801437323 16 14.966505029083155 23.464668707454035 29.49260246829491 32.076223795167905 17 15.752117865145493 24.892703862660944 33.51896500346366 25.836213268729903 18 15.506758979399915 22.626036679992414 33.88622932928788 27.980975011319792 19 17.17589600498458 25.348591508415346 29.724803306539936 27.75070918006014 20 19.5884627143504 24.410113120508363 37.150973115012945 18.850451050128292 21 22.41395991439529 28.181054733607585 28.356753367879655 21.048231984117464 22 17.087272685054394 23.458089683703758 31.44076750117068 28.013870130071172 23 17.899975618911984 27.753418189839664 28.788646927015403 25.55795926423294 24 22.474332132338997 21.533144734652492 27.373769819309047 28.618753313699465 25 16.660023142683546 30.451204928849794 25.08659156259554 27.80218036587112 26 20.554805202846783 24.21467741498547 28.203887816035017 27.026629566132733 27 20.100078561283606 29.915207993900854 25.624136503132778 24.36057694168276 28 16.702980297758874 26.93452323362887 32.306489626427556 24.0560068421847 29 23.10978842633622 21.452261442663808 26.56996791758418 28.86798221341579 30 21.678270258555635 29.380759064540225 26.868345994729044 22.072624682175103 31 24.811433569275184 28.302186170892078 21.489026575385935 25.3973536844468 32 22.617522649256763 33.306501236469465 20.451475829827746 23.624500284446025 33 23.190284716927827 27.580041563950047 21.319906964864145 27.90976675425798 34 28.078112361985625 25.58698436901357 23.936423410488512 22.39847985851229 35 19.74713328715117 29.344767934612243 22.578435508152182 28.329663270084403 36 26.33351006397133 30.66792571121182 22.26728638490385 20.731277839913 37 18.505632805334425 30.218617089207694 29.038262828128808 22.23748727732907 38 22.144993943428133 31.298737988444138 21.96039427702334 24.595873791104385 39 25.83698727152405 23.590831162900496 26.041711010576744 24.530470554998704 40 27.8397195013874 25.328854437164516 26.016168918369797 20.815257143078288 41 23.918234344825983 30.133863783248255 22.677507865803396 23.27039400612236 42 20.000232200838244 28.218593869123872 27.962785945657266 23.818387984380625 43 24.136890134173385 27.551403460566494 23.300967116491293 25.010739288768836 44 21.888412017167383 22.364423735569687 29.412493179100373 26.334671068162557 45 21.278497815377115 21.65892018870188 25.18721192583505 31.87537007008595 46 27.09125879944427 24.60438782184004 26.30487196058778 21.99948141812792 47 18.14069048789266 22.815667364559186 36.601431131166386 22.44221101638177 48 21.22122160861001 25.472818956876438 26.29442292286675 27.011536511646806 49 19.92321892282031 21.23592766169886 35.26356730147796 23.57728611400287 50 24.9337260107509 20.958060658598978 27.538632414463017 26.569580916187107 51 20.753336919546282 19.466944275668833 25.596659403940446 34.183059400844435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 37.0 1 107.0 2 177.0 3 571.0 4 965.0 5 682.0 6 399.0 7 411.5 8 424.0 9 471.0 10 518.0 11 546.5 12 575.0 13 570.5 14 566.0 15 533.0 16 500.0 17 519.0 18 538.0 19 532.5 20 527.0 21 630.0 22 733.0 23 802.0 24 871.0 25 969.0 26 1341.0 27 1615.0 28 1968.0 29 2321.0 30 2381.0 31 2441.0 32 2961.5 33 3482.0 34 3917.0 35 4352.0 36 5177.0 37 6002.0 38 6192.5 39 6383.0 40 7714.5 41 9046.0 42 10677.0 43 12308.0 44 14382.5 45 16457.0 46 33739.5 47 51022.0 48 44062.5 49 37103.0 50 34838.5 51 32574.0 52 25487.0 53 18400.0 54 15273.0 55 12146.0 56 10422.0 57 8698.0 58 8174.5 59 7651.0 60 6852.5 61 6054.0 62 5193.5 63 4333.0 64 3713.0 65 3093.0 66 2538.0 67 1983.0 68 1569.5 69 1156.0 70 995.5 71 835.0 72 663.0 73 491.0 74 378.0 75 201.0 76 137.0 77 118.0 78 99.0 79 59.0 80 19.0 81 26.0 82 33.0 83 17.0 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 258397.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.800315019137216 #Duplication Level Percentage of deduplicated Percentage of total 1 71.73427678356748 24.24641152954562 2 12.073644076529385 8.161859464312666 3 4.750455123140865 4.8170063893930655 4 2.3872496822725244 3.227591651605862 5 1.3705217600384707 2.316203361494135 6 0.9846689336951419 1.9969272089072243 7 0.7041527839796655 1.666041014408062 8 0.5484376967906662 1.4829893535915664 9 0.4682902254433873 1.4245521426332348 >10 4.801978497578401 29.086638002763188 >50 0.103046748875073 2.4094706981892204 >100 0.0549582660667056 3.1865695035159076 >500 0.0045798555055587995 0.8614651098890467 >1k 0.010304674887507298 7.1645568640502795 >5k 0.0034348916291691 7.951717705700917 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGC 8583 3.3216329910950977 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCG 6587 2.549178202533311 No Hit GAATCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTC 5377 2.0809065120725085 No Hit GCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC 3903 1.5104664527838945 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAACGGAAT 2641 1.0220706896751899 No Hit CCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC 2563 0.9918845807033363 No Hit CTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCT 1900 0.7353026544425825 No Hit GAACTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCT 1761 0.6815094602491515 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAACGGAATCGTA 1696 0.6563543694392737 No Hit TCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGC 1409 0.5452849684787362 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTC 1337 0.5174208678893331 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCT 1303 0.5042628203887816 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGAACGGAATCGT 629 0.2434238787602023 No Hit CGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTG 547 0.21168976420004876 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 537 0.20781975022929833 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATG 513 0.1985317166994973 No Hit TGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTGCTT 465 0.1799556496398952 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTAT 382 0.1478345336826666 No Hit TTCCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCT 347 0.13428948478504008 No Hit GAATCTGTCTCTTATACACATCTGACGCGCACGGAATCGTATGCCGTCTTC 333 0.12887146522598947 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGAACGGAA 326 0.12616245544646415 No Hit TCCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTG 309 0.11958343169618843 No Hit GAATGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTT 303 0.11726142331373815 No Hit TGCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCCGTCTTCTG 292 0.11300440794591267 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACGGAATCGTATGCC 270 0.10449037721026173 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8649481224627221 0.0 2 0.0 0.0 0.0 4.373115786947991 0.0 3 0.0 0.0 0.0 5.33984527684145 0.0 4 0.0 0.0 0.0 7.378568636632778 0.0 5 0.0 0.0 0.0 11.62590896953138 0.0 6 0.0 0.0 0.0 12.70099885060585 0.0 7 0.0 0.0 0.0 14.147997074269439 0.0 8 0.0 0.0 0.0 16.097710112733505 0.0 9 0.0 0.0 0.0 16.72620038158338 0.0 10 0.0 0.0 0.0 20.744435887413555 0.0 11 0.0 0.0 0.0 23.050964213980812 0.0 12 0.0 0.0 0.0 28.889267290254917 0.0 13 0.0 0.0 0.0 29.878829862575802 0.0 14 0.0 0.0 0.0 30.269314272224523 0.0 15 0.0 0.0 0.0 31.390457319550922 0.0 16 0.0 0.0 0.0 32.489541287244045 0.0 17 0.0 0.0 0.0 33.8037980317109 0.0 18 0.0 0.0 0.0 35.11495876500114 0.0 19 0.0 0.0 0.0 37.11807799626157 0.0 20 0.0 0.0 0.0 38.28604821263405 0.0 21 0.0 0.0 0.0 39.479173519816406 0.0 22 0.0 0.0 0.0 40.852641478035736 0.0 23 0.0 0.0 0.0 42.03918776146782 0.0 24 0.0 0.0 0.0 42.96644310885962 0.0 25 0.0 0.0 0.0 43.74895993374536 0.0 26 0.0 0.0 0.0 44.49084161193822 0.0 27 0.0 0.0 0.0 45.14951798975994 0.0 28 0.0 0.0 0.0 45.83296245699447 0.0 29 0.0 0.0 0.0 46.58955018827618 0.0 30 0.0 0.0 0.0 47.49900347140253 0.0 31 0.0 0.0 0.0 48.23275812025681 0.0 32 0.0 0.0 0.0 48.97850981242042 0.0 33 0.0 0.0 0.0 49.61125709663812 0.0 34 0.0 0.0 0.0 50.341528732918725 0.0 35 0.0 0.0 0.0 51.02845621272693 0.0 36 0.0 0.0 0.0 51.744021795918684 0.0 37 0.0 0.0 0.0 52.431723278521034 0.0 38 0.0 0.0 0.0 53.04860350545866 0.0 39 0.0 0.0 0.0 53.723146940560454 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAGTGTC 20 7.023124E-4 45.000004 12 CGGGTAT 20 7.023124E-4 45.000004 6 AACCGCG 20 7.023124E-4 45.000004 12 ACGCCCG 20 7.023124E-4 45.000004 29 CTCGTGC 20 7.023124E-4 45.000004 32 TCCGCAG 20 7.023124E-4 45.000004 1 GATCGGA 20 7.023124E-4 45.000004 45 GGTCGGC 20 7.023124E-4 45.000004 2 GGACTAC 20 7.023124E-4 45.000004 8 CCAATAC 20 7.023124E-4 45.000004 16 CACGCCC 20 7.023124E-4 45.000004 28 TACGGTT 20 7.023124E-4 45.000004 33 CTAAGAT 20 7.023124E-4 45.000004 41 ACTTATG 20 7.023124E-4 45.000004 20 CCTCGTC 20 7.023124E-4 45.000004 36 TGACGGA 20 7.023124E-4 45.000004 25 TGCATTG 20 7.023124E-4 45.000004 1 ATTCCAC 20 7.023124E-4 45.000004 10 TCGGAAA 20 7.023124E-4 45.000004 25 CTTATTG 20 7.023124E-4 45.000004 1 >>END_MODULE