SRR2933785.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933785.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	839316
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGC	7457	0.8884615567914826	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCG	6085	0.7249951150698902	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTC	4549	0.5419889529092737	No Hit
GCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC	3789	0.45143902892355203	Illumina Single End Adapter 2 (95% over 21bp)
CCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC	3176	0.3784033665508581	Illumina Single End Adapter 2 (95% over 21bp)
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGATGGCT	2329	0.2774878591615077	No Hit
CTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGCT	2227	0.26533510620552925	Illumina Single End Adapter 2 (95% over 22bp)
TCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC	2028	0.241625323477689	Illumina Single End Adapter 2 (95% over 21bp)
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTA	1497	0.17835952132450708	No Hit
GAACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCT	1310	0.15607947423854662	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCT	1061	0.12641245966954043	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1058	0.1260550257590705	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTC	1051	0.12522101330130725	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTTACG	20	7.032199E-4	45.0	1
ATCCGAA	20	7.032199E-4	45.0	10
ACTACGC	25	3.8899037E-5	45.0	34
CCGACTA	25	3.8899037E-5	45.0	26
TACCGCT	20	7.032199E-4	45.0	12
TGTTCCG	80	0.0	42.1875	1
TACGGCT	950	0.0	41.210526	7
CGTTTGG	580	0.0	41.12069	2
ACATACG	55	6.002665E-11	40.909092	17
TTCACGG	50	1.0804797E-9	40.5	2
TGGGCGA	1075	0.0	40.395348	6
CGGTAGG	130	0.0	39.807693	31
TTTAGCG	40	3.4567347E-7	39.375	1
AACACGT	40	3.4567347E-7	39.375	41
ATACGGC	1890	0.0	39.285713	6
TGATACG	1905	0.0	39.094486	4
GGCGATA	75	0.0	39.0	8
TTTGGGA	4925	0.0	38.92386	4
GATACGG	1915	0.0	38.772846	5
CGTCGCG	35	6.246275E-6	38.57143	15