##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933785.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 839316 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.941601256261052 31.0 25.0 33.0 16.0 34.0 2 29.445988161788886 31.0 28.0 34.0 16.0 34.0 3 30.318879897440297 31.0 30.0 34.0 25.0 34.0 4 33.23223315175691 35.0 32.0 37.0 28.0 37.0 5 34.01861754095001 35.0 33.0 37.0 28.0 37.0 6 33.65399325164777 35.0 35.0 37.0 28.0 37.0 7 33.52965629155169 35.0 32.0 35.0 29.0 37.0 8 34.24729899108321 35.0 35.0 37.0 31.0 37.0 9 34.98292657354322 37.0 34.0 39.0 29.0 39.0 10 33.71655252610459 35.0 31.0 39.0 27.0 39.0 11 33.96232170005099 35.0 32.0 39.0 27.0 39.0 12 34.28605674144184 37.0 32.0 39.0 27.0 39.0 13 34.70306892755529 37.0 34.0 39.0 27.0 39.0 14 34.5078123138365 37.0 32.0 39.0 25.0 40.0 15 35.022085841327936 37.0 32.0 39.0 27.0 40.0 16 34.8229379637705 37.0 32.0 39.0 27.0 40.0 17 34.673952361208414 36.0 33.0 39.0 27.0 40.0 18 34.584614138179184 37.0 32.0 39.0 27.0 40.0 19 34.43169557115556 37.0 32.0 39.0 25.0 40.0 20 35.62343265230259 37.0 34.0 39.0 30.0 40.0 21 34.66389417096779 37.0 33.0 39.0 25.0 40.0 22 35.53137793155379 37.0 34.0 39.0 28.0 40.0 23 36.4970332985431 38.0 35.0 40.0 31.0 41.0 24 36.57763941113955 38.0 35.0 40.0 31.0 41.0 25 34.28611631376025 37.0 32.0 39.0 24.0 40.0 26 34.972226193710114 37.0 33.0 39.0 27.0 40.0 27 35.74882165954182 37.0 34.0 39.0 30.0 40.0 28 35.96363229105605 38.0 34.0 40.0 30.0 41.0 29 36.514625004170064 38.0 35.0 40.0 30.0 41.0 30 34.11463977810503 37.0 32.0 39.0 24.0 40.0 31 35.00691634616759 37.0 33.0 39.0 27.0 40.0 32 35.46912724170634 37.0 34.0 39.0 30.0 40.0 33 36.46005556905862 38.0 35.0 40.0 31.0 41.0 34 36.78492486739202 38.0 35.0 40.0 31.0 41.0 35 36.90586263099953 39.0 35.0 40.0 32.0 41.0 36 36.81600374590738 39.0 35.0 40.0 31.0 41.0 37 37.06921469386977 39.0 35.0 40.0 32.0 41.0 38 36.62328372150656 38.0 35.0 40.0 31.0 41.0 39 36.5199531523288 38.0 35.0 40.0 31.0 41.0 40 36.15542894452149 38.0 35.0 40.0 30.0 41.0 41 35.82799803649638 38.0 34.0 40.0 30.0 41.0 42 36.54823689766429 38.0 35.0 40.0 31.0 41.0 43 36.533154378088824 38.0 35.0 40.0 31.0 41.0 44 36.888735589456175 39.0 35.0 40.0 32.0 41.0 45 37.10608400173474 39.0 35.0 40.0 33.0 41.0 46 36.84195940503934 39.0 35.0 40.0 32.0 41.0 47 36.812203031992716 39.0 35.0 40.0 32.0 41.0 48 36.788456314427464 39.0 35.0 40.0 32.0 41.0 49 36.932939441163995 39.0 35.0 40.0 32.0 41.0 50 36.803688956245324 39.0 35.0 40.0 32.0 41.0 51 36.0218058514314 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 23.0 11 15.0 12 27.0 13 31.0 14 64.0 15 61.0 16 112.0 17 239.0 18 372.0 19 579.0 20 904.0 21 1269.0 22 1918.0 23 2581.0 24 3603.0 25 5080.0 26 6824.0 27 9032.0 28 12170.0 29 16713.0 30 23369.0 31 33016.0 32 46468.0 33 62139.0 34 79054.0 35 107413.0 36 143178.0 37 162284.0 38 107547.0 39 13222.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.61907553293396 4.382378031635284 53.07321676222067 16.92532967321009 2 19.307984120402804 7.1462953166626155 52.89986131564274 20.645859247291842 3 20.774892888971497 7.280571322362494 50.766100014773926 21.178435773892073 4 18.113797425522687 4.5413169771575905 52.48642942586582 24.8584561714539 5 20.41019115565532 5.648289797883038 49.28417902196551 24.65734002449614 6 21.77118034208808 8.781436312425832 51.716278493439894 17.73110485204619 7 82.67672723980003 1.8923742666647603 11.405716083096236 4.025182410438976 8 83.69017152061917 4.740645954563001 6.744063022747095 4.825119502070733 9 78.11968317058175 4.936758026774183 8.470945388864266 8.472613413779792 10 35.7259959300192 30.253563616087387 17.82379937949473 16.196641074398677 11 29.84084659413141 25.29166607094348 24.973073312077933 19.894414022847176 12 26.96993742523674 21.89604392147892 29.396317954143612 21.73770069914073 13 24.474572151609166 22.473776265435188 32.395069318349705 20.65658226460594 14 21.762482783599978 24.838678161741225 30.182672557177508 23.216166497481282 15 19.20301769536146 25.234714934541934 34.174375324669136 21.387892045427467 16 21.668596809783207 24.719056946370614 30.373661410005294 23.23868483384089 17 21.99409995758451 23.918285842281094 31.077925358267922 23.00968884186647 18 21.324983677184754 23.88897626162256 31.605497810121573 23.18054225107111 19 22.932602261841787 25.611926854724558 28.981575473361644 22.47389541007201 20 24.942453140414337 25.506483851135926 30.685343779935092 18.865719228514646 21 25.131773968326588 25.880478866124317 28.231798273832503 20.75594889171659 22 23.17911251542923 23.790562791606497 29.53047481520667 23.499849877757605 23 22.293510429921508 26.245776322624614 28.783437942324465 22.677275305129417 24 22.80142401669931 24.540101701861992 28.60698473518913 24.051489546249567 25 21.25707123419546 26.538514695299504 26.75416648794971 25.45024758255532 26 20.796458068236518 27.499058757369095 28.434105867158493 23.270377307235893 27 21.894018462652923 27.66609953819539 27.6278541097751 22.812027889376587 28 20.342397857302853 26.665522878153165 29.8929128004232 23.099166464120785 29 21.40635946413508 26.874264281867617 28.601384937258434 23.117991316738866 30 22.033775121646674 26.14652884015079 29.209618308241474 22.610077729961063 31 23.688336693212094 27.55779706332299 26.33251361823199 22.421352625232927 32 23.498896720663016 29.457796586744443 25.93111533677423 21.11219135581831 33 22.324011456948277 25.631109141253116 27.313550557835192 24.731328843963418 34 23.45278774621239 26.933360021731982 27.52789175948034 22.085960472575287 35 21.51978515839088 27.624398915307225 26.77215732811003 24.083658598191864 36 22.244184550276653 29.06044922293868 25.89310819762759 22.802258029157073 37 22.357371955258806 28.86040537771233 27.579600531861658 21.202622135167207 38 23.12371025930639 27.20453321514185 26.74201373499373 22.929742790558024 39 22.785577780001812 26.538157261389035 28.314722941061532 22.361542017547624 40 23.55072463768116 24.419169895486327 30.117143006924685 21.91296245990783 41 22.910083925482176 25.795886173979767 27.080265358935137 24.213764541602924 42 22.693002397190092 25.33038807791106 26.970533148420856 25.00607637647799 43 22.230125483131502 25.542822965367034 26.78824185408118 25.43880969742028 44 21.650725114259707 25.24245933593545 28.00911694760972 25.097698602195123 45 22.142792464340012 24.31229715625581 27.62749667586463 25.917413703539548 46 22.764489179284084 26.837448589089213 27.628092399048747 22.769969832577956 47 20.114474167059843 26.10661538681498 30.93566666190088 22.843243784224295 48 21.87698077958719 25.683175347544907 28.524655791144216 23.91518808172369 49 21.912605025997358 24.177425427371812 31.09591619842824 22.814053348202584 50 22.600427014378376 23.49651382792655 28.65249798645564 25.25056117123944 51 21.245156770513134 23.25417363662792 27.68706899427629 27.813600598582656 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 120.0 1 492.5 2 865.0 3 1634.5 4 2404.0 5 1844.0 6 1284.0 7 1263.0 8 1242.0 9 1303.5 10 1365.0 11 1382.5 12 1400.0 13 1405.5 14 1411.0 15 1405.5 16 1400.0 17 1360.0 18 1320.0 19 1619.5 20 1919.0 21 2406.5 22 2894.0 23 3224.0 24 3554.0 25 4359.0 26 6481.0 27 7798.0 28 8982.5 29 10167.0 30 12033.0 31 13899.0 32 16132.0 33 18365.0 34 20784.0 35 23203.0 36 25562.0 37 27921.0 38 30865.5 39 33810.0 40 37031.0 41 40252.0 42 44127.0 43 48002.0 44 53449.0 45 58896.0 46 75425.5 47 91955.0 48 89350.0 49 86745.0 50 84296.0 51 81847.0 52 70709.0 53 59571.0 54 52449.0 55 45327.0 56 41966.0 57 38605.0 58 36037.0 59 33469.0 60 31069.0 61 28669.0 62 25082.0 63 21495.0 64 19168.0 65 16841.0 66 13129.5 67 9418.0 68 7892.5 69 6367.0 70 5196.0 71 4025.0 72 3504.0 73 2983.0 74 2338.5 75 1233.0 76 772.0 77 605.0 78 438.0 79 334.0 80 230.0 81 192.0 82 154.0 83 95.0 84 36.0 85 23.0 86 10.0 87 7.5 88 5.0 89 3.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 839316.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.62663128599471 #Duplication Level Percentage of deduplicated Percentage of total 1 72.14556155254701 22.09575512590893 2 11.111390499362262 6.806089197973453 3 4.159048291542692 3.821329155771727 4 1.9532086592070224 2.3928080572058223 5 1.1725677534347323 1.795590012114635 6 0.7518674578815374 1.38163004450856 7 0.5810967915455592 1.2457926023298256 8 0.45535440651601644 1.1156777210255184 9 0.4249774430937399 1.1714064709047094 >10 7.045890835222861 47.99802032435134 >50 0.14740510917449648 2.9169364186419426 >100 0.044536837048459725 2.3725381552709797 >500 0.001970656506569014 0.3457109782089079 >1k 0.004335444314451831 2.906072555998414 >5k 7.882626026276056E-4 1.634643179785276 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGC 7457 0.8884615567914826 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCG 6085 0.7249951150698902 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTC 4549 0.5419889529092737 No Hit GCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC 3789 0.45143902892355203 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC 3176 0.3784033665508581 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGATGGCT 2329 0.2774878591615077 No Hit CTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGCT 2227 0.26533510620552925 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCTGC 2028 0.241625323477689 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTA 1497 0.17835952132450708 No Hit GAACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTCT 1310 0.15607947423854662 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCT 1061 0.12641245966954043 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1058 0.1260550257590705 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTC 1051 0.12522101330130725 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.32407341215942503 0.0 2 0.0 0.0 0.0 1.554718365907477 0.0 3 0.0 0.0 0.0 1.9792307069089592 0.0 4 0.0 0.0 0.0 2.6743205181361964 0.0 5 0.0 0.0 0.0 4.095001167617441 0.0 6 0.0 0.0 0.0 4.605535936405358 0.0 7 0.0 0.0 0.0 5.227828374533549 0.0 8 0.0 0.0 0.0 6.09651192161236 0.0 9 0.0 0.0 0.0 6.415104680477913 0.0 10 0.0 0.0 0.0 7.879511411673315 0.0 11 0.0 0.0 0.0 9.210952728173893 0.0 12 0.0 0.0 0.0 11.313140700284517 0.0 13 0.0 0.0 0.0 11.778877085626867 0.0 14 0.0 0.0 0.0 11.93876918824376 0.0 15 0.0 0.0 0.0 12.358277454498664 0.0 16 0.0 0.0 0.0 12.926835661419537 0.0 17 0.0 0.0 0.0 13.717360326742252 0.0 18 0.0 0.0 0.0 14.504310652960267 0.0 19 0.0 0.0 0.0 15.366441245013798 0.0 20 0.0 0.0 0.0 16.022451615362986 0.0 21 0.0 0.0 0.0 16.8998327209299 0.0 22 0.0 0.0 0.0 17.870742366403118 0.0 23 0.0 0.0 0.0 18.762182539115184 0.0 24 0.0 0.0 0.0 19.459178664531596 0.0 25 0.0 0.0 0.0 20.111376406502437 0.0 26 0.0 0.0 0.0 20.714963136649367 0.0 27 0.0 0.0 0.0 21.29758041071539 0.0 28 0.0 0.0 0.0 21.88961011109046 0.0 29 0.0 0.0 0.0 22.517859781059816 0.0 30 0.0 0.0 0.0 23.168746932025602 0.0 31 0.0 0.0 0.0 23.825591314832554 0.0 32 0.0 0.0 0.0 24.437399024920293 0.0 33 0.0 0.0 0.0 25.016322815244795 0.0 34 0.0 0.0 0.0 25.607161069251628 0.0 35 0.0 0.0 0.0 26.211343522582673 0.0 36 0.0 0.0 0.0 26.83673372126827 0.0 37 0.0 0.0 0.0 27.43889071577332 0.0 38 0.0 0.0 0.0 28.074169919315253 0.0 39 0.0 0.0 0.0 28.690862559512745 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTACG 20 7.032199E-4 45.0 1 ATCCGAA 20 7.032199E-4 45.0 10 ACTACGC 25 3.8899037E-5 45.0 34 CCGACTA 25 3.8899037E-5 45.0 26 TACCGCT 20 7.032199E-4 45.0 12 TGTTCCG 80 0.0 42.1875 1 TACGGCT 950 0.0 41.210526 7 CGTTTGG 580 0.0 41.12069 2 ACATACG 55 6.002665E-11 40.909092 17 TTCACGG 50 1.0804797E-9 40.5 2 TGGGCGA 1075 0.0 40.395348 6 CGGTAGG 130 0.0 39.807693 31 TTTAGCG 40 3.4567347E-7 39.375 1 AACACGT 40 3.4567347E-7 39.375 41 ATACGGC 1890 0.0 39.285713 6 TGATACG 1905 0.0 39.094486 4 GGCGATA 75 0.0 39.0 8 TTTGGGA 4925 0.0 38.92386 4 GATACGG 1915 0.0 38.772846 5 CGTCGCG 35 6.246275E-6 38.57143 15 >>END_MODULE