##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933781.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 244121 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.66534218686635 30.0 16.0 31.0 16.0 34.0 2 26.664277141253724 31.0 16.0 33.0 16.0 34.0 3 27.602971477259228 31.0 25.0 33.0 16.0 34.0 4 31.70954157979035 35.0 28.0 35.0 19.0 37.0 5 33.55587188320546 35.0 33.0 37.0 28.0 37.0 6 32.25378398417178 35.0 32.0 37.0 17.0 37.0 7 33.47533804957378 35.0 32.0 35.0 29.0 37.0 8 32.821268960884154 35.0 32.0 37.0 26.0 37.0 9 34.417280774697794 37.0 32.0 39.0 28.0 39.0 10 33.97815017962404 35.0 32.0 39.0 27.0 39.0 11 34.578848194133236 37.0 33.0 39.0 27.0 39.0 12 34.60100523920515 37.0 34.0 39.0 27.0 39.0 13 34.87529954407855 37.0 34.0 39.0 30.0 39.0 14 34.55498297975184 37.0 33.0 39.0 27.0 40.0 15 35.0681629192081 37.0 33.0 39.0 27.0 40.0 16 34.15660676467817 36.0 32.0 38.0 27.0 40.0 17 34.266171283912485 36.0 32.0 38.0 27.0 40.0 18 34.29773759733902 36.0 32.0 39.0 27.0 40.0 19 33.71684943122468 36.0 32.0 39.0 25.0 40.0 20 34.668500456740716 36.0 32.0 39.0 27.0 40.0 21 34.340712187808506 37.0 32.0 39.0 27.0 40.0 22 35.544619266675134 37.0 34.0 39.0 30.0 40.0 23 36.11098594549424 38.0 34.0 39.0 30.0 40.0 24 36.26247639490253 38.0 35.0 40.0 31.0 40.0 25 34.37763649993241 37.0 32.0 39.0 25.0 40.0 26 35.19006558223176 37.0 34.0 39.0 28.0 40.0 27 35.530986682833515 37.0 34.0 39.0 30.0 40.0 28 35.46515867131463 38.0 34.0 39.0 29.0 40.0 29 36.10776623068069 38.0 35.0 40.0 30.0 40.0 30 34.12027642029977 37.0 32.0 39.0 24.0 40.0 31 34.690342084458116 37.0 33.0 39.0 25.0 40.0 32 35.401665567484976 37.0 34.0 39.0 30.0 40.0 33 35.927937375317974 38.0 35.0 40.0 30.0 40.0 34 36.15106852749251 38.0 35.0 40.0 30.0 40.0 35 36.50373790046739 38.0 35.0 40.0 31.0 41.0 36 36.268784741992704 38.0 35.0 40.0 30.0 41.0 37 36.549321852687804 38.0 35.0 40.0 31.0 41.0 38 35.91264168178895 38.0 35.0 40.0 30.0 41.0 39 36.04874222209478 38.0 35.0 40.0 30.0 41.0 40 35.73845347184388 38.0 34.0 40.0 30.0 41.0 41 34.986633677561535 37.0 33.0 40.0 27.0 40.0 42 36.06833086870855 38.0 35.0 40.0 30.0 41.0 43 36.09703384796884 38.0 35.0 40.0 31.0 40.0 44 36.4968192003146 38.0 35.0 40.0 31.0 41.0 45 36.81090934413672 39.0 35.0 40.0 32.0 41.0 46 36.612339782321065 39.0 35.0 40.0 31.0 41.0 47 36.21743315814698 38.0 35.0 40.0 30.0 41.0 48 36.44242814014362 38.0 35.0 40.0 31.0 41.0 49 36.7308179140672 39.0 35.0 40.0 32.0 41.0 50 36.47382240774042 38.0 35.0 40.0 31.0 41.0 51 35.90748440322627 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 4.0 12 4.0 13 4.0 14 8.0 15 13.0 16 21.0 17 54.0 18 105.0 19 196.0 20 326.0 21 462.0 22 552.0 23 790.0 24 1064.0 25 1576.0 26 2271.0 27 2997.0 28 4164.0 29 5825.0 30 8542.0 31 11875.0 32 16348.0 33 21619.0 34 28239.0 35 36870.0 36 41618.0 37 38224.0 38 18810.0 39 1537.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.83384878810099 3.356122578557355 40.9424015140033 14.867627119338362 2 15.3296930620471 25.59017864091987 37.66902478688847 21.41110351014456 3 15.045407810061404 25.35873603663757 42.4945006779425 17.10135547535853 4 17.494193453246545 3.0157176154448 58.09004551021829 21.400043421090363 5 30.42097976003703 3.6346729695519846 41.71374031730167 24.23060695310932 6 15.74588011682731 20.92282106004809 43.759037526472525 19.57226129665207 7 58.74095223270427 1.2780547351518303 32.754248917544984 7.226744114598908 8 53.72950299236854 16.74128813170518 15.799132397458637 13.730076478467645 9 49.51765722735856 4.710369038304775 18.46911982172775 27.30285391260891 10 33.076220398900546 20.322299187697904 26.626140315663132 19.975340097738417 11 27.397069486033566 22.80877106025291 29.087624579614207 20.70653487409932 12 20.81508760000164 15.303066921731437 36.607665870613346 27.274179607653583 13 20.271095071706245 23.396594311837163 41.07471294972575 15.257597666730843 14 17.835417682214967 27.8923156959049 27.511766705854885 26.76049991602525 15 10.83847764018663 24.814743508342175 43.39077752426051 20.956001327210686 16 10.589830452931128 24.217908332343388 28.155300035638064 37.03696117908742 17 12.091544766734529 27.355696560312303 33.729584918954124 26.82317375399904 18 11.951450305381348 23.00908156201228 36.8804814006169 28.158986731989465 19 13.741136567521844 24.745515543521453 30.241970170530188 31.271377718426518 20 15.407523318354421 25.668008897227196 41.88128018482637 17.043187599592006 21 20.653282593467992 30.679458137562932 28.534210493976346 20.13304877499273 22 13.892700750857156 23.85579282405037 31.81905694307331 30.432449482019162 23 15.469377890472346 29.554196484530216 28.59688433195014 26.3795412930473 24 22.529811036330344 20.77781100355971 25.1424498506888 31.54992810942115 25 13.41343022517522 32.36878433235977 22.854649948181436 31.363135494283572 26 15.942503922235286 21.22799759135838 28.617775611274737 34.21172287513159 27 24.245353738514915 25.86340380385137 23.198331974717455 26.69291048291626 28 11.804801717181233 27.38314196648383 32.13365503172607 28.678401284608864 29 19.20523019322385 18.262664826049377 24.57346971378947 37.95863526693729 30 20.413237697699092 27.320468128510043 30.522568726164483 21.74372544762638 31 18.71653811019945 31.36272586135564 21.115758169104666 28.804977859340248 32 20.107241900532934 27.041508104587482 26.388143584533903 26.463106410345688 33 21.06045772383367 21.33245398798137 25.906824894212292 31.700263393972662 34 19.440769126785487 25.817934548850772 27.43762314589896 27.303673178464777 35 20.927736655183292 17.285280660000574 29.10564842844327 32.681334256372864 36 25.479577750377885 23.75952908598605 24.215040901847853 26.545852261788212 37 21.063325154329206 21.955505671367888 33.10038874164861 23.880780432654298 38 18.896776598490092 28.492427935327154 28.08238537446594 24.52841009171681 39 21.00884397491408 24.640239881042596 29.191261710381326 25.15965443366199 40 19.76355987399691 19.73734336660918 38.687781878658534 21.81131488073537 41 22.392174372544762 28.02995235969048 23.40888329967516 26.168989968089594 42 21.02277149446381 16.442256094313883 36.626918618226206 25.908053792996093 43 31.449568042077498 16.821985818508033 23.598543345308272 28.129902794106204 44 21.948951544520956 18.00705387901901 31.418026306626633 28.6259682698334 45 18.18893089902139 16.623313848460395 28.906976458395633 36.28077879412259 46 27.92959229234683 20.287480388823575 29.439499264708896 22.343428054120704 47 13.69566731252125 16.8277206794991 46.458108888624906 23.018503119354747 48 19.78322225453771 21.95796346893549 28.010699612077616 30.24811466444919 49 18.46993908758362 13.680101261259786 43.64147287615568 24.208486775000924 50 26.068629900745943 13.365093539679092 31.383207507752303 29.183069051822663 51 18.897186231418026 14.0569635549584 27.739112980857854 39.30673723276572 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 88.0 1 125.0 2 162.0 3 453.0 4 744.0 5 536.5 6 329.0 7 340.5 8 352.0 9 455.5 10 559.0 11 539.0 12 519.0 13 535.0 14 551.0 15 494.0 16 437.0 17 476.0 18 515.0 19 490.0 20 465.0 21 532.0 22 599.0 23 637.5 24 676.0 25 737.0 26 968.5 27 1139.0 28 1177.5 29 1216.0 30 1541.0 31 1866.0 32 1945.0 33 2024.0 34 2427.0 35 2830.0 36 3297.5 37 3765.0 38 4244.5 39 4724.0 40 5662.5 41 6601.0 42 8152.0 43 9703.0 44 12138.5 45 14574.0 46 40187.0 47 65800.0 48 54193.0 49 42586.0 50 39530.0 51 36474.0 52 26143.5 53 15813.0 54 12550.0 55 9287.0 56 7619.5 57 5952.0 58 5133.5 59 4315.0 60 3618.5 61 2922.0 62 2612.0 63 2302.0 64 1875.0 65 1448.0 66 1132.5 67 817.0 68 602.0 69 387.0 70 335.0 71 283.0 72 230.5 73 178.0 74 162.0 75 123.0 76 100.0 77 65.0 78 30.0 79 29.0 80 28.0 81 18.0 82 8.0 83 5.5 84 3.0 85 1.5 86 0.0 87 2.5 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 244121.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.992417694503953 #Duplication Level Percentage of deduplicated Percentage of total 1 71.26581107336867 22.08699784123447 2 12.561625186692924 7.786302694155767 3 4.906223978641008 4.5616722854649945 4 2.5310934588086016 3.137788227968917 5 1.6746190142613568 2.5950245984573224 6 1.204086757689105 2.239053584083303 7 0.8564744445472448 1.8580949611053534 8 0.7295893416513567 1.80893900975336 9 0.6317820748357763 1.7622408559689662 >10 3.382281024068518 16.714661991389516 >50 0.14274574075787413 3.048078616751529 >100 0.08723350824092309 5.026605658669267 >500 0.009252038752825176 1.9576357625931402 >1k 0.011895478396489512 9.931140704814416 >5k 0.0026434396436643363 6.521765845625735 >10k+ 0.0026434396436643363 8.963997361963944 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGC 11704 4.794343788531098 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCG 10179 4.169653573432846 No Hit GAATCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTC 8947 3.664985806219047 No Hit GCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 6974 2.856780039406688 RNA PCR Primer, Index 27 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGACTATGT 4069 1.6667963837605122 No Hit CCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 3470 1.4214262599284782 RNA PCR Primer, Index 38 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 2705 1.1080570700595196 RNA PCR Primer, Index 27 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGCT 2683 1.0990451456449875 RNA PCR Primer, Index 38 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 2675 1.0957680822215214 RNA PCR Primer, Index 27 (95% over 23bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGACTATGTCGTA 2620 1.0732382711851909 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCT 2383 0.9761552672650038 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTC 2174 0.8905419853269486 No Hit TGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGCTT 1465 0.6001122394222537 RNA PCR Primer, Index 27 (96% over 25bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGACTATGTCGT 885 0.3625251412209519 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATG 745 0.3051765313102928 No Hit TCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTG 690 0.2826467202739625 RNA PCR Primer, Index 38 (95% over 22bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTAT 688 0.2818274544180959 No Hit CGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTG 681 0.27896002392256297 RNA PCR Primer, Index 38 (95% over 22bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCGACTATG 584 0.23922562991303492 No Hit TGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTG 506 0.2072742615342392 RNA PCR Primer, Index 27 (95% over 22bp) TTCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 493 0.20194903347110654 RNA PCR Primer, Index 27 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 440 0.18023848829064276 No Hit TTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTG 391 0.16016647482191207 RNA PCR Primer, Index 27 (95% over 22bp) GAATGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTT 372 0.1523834491911798 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTC 358 0.1466485882001139 No Hit TGCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 353 0.14460042356044747 RNA PCR Primer, Index 38 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCC 304 0.12452841009171682 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCCGACTATGTCG 264 0.10814309297438565 No Hit CGTCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 258 0.10568529540678596 RNA PCR Primer, Index 38 (95% over 21bp) GCCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 253 0.1036371307671196 RNA PCR Primer, Index 38 (95% over 21bp) TTTCCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTC 248 0.10158896612745319 No Hit ACTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCTGC 246 0.10076970027158663 RNA PCR Primer, Index 27 (95% over 23bp) TTGCTGTCTCTTATACACATCTGACGCCGACTATGTCGTATGCCGTCTTCT 245 0.10036006734365334 RNA PCR Primer, Index 38 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.2923918876294953 0.0 2 0.0 0.0 0.0 7.129661110678721 0.0 3 0.0 0.0 0.0 8.62359239885139 0.0 4 0.0 0.0 0.0 11.796609058622568 0.0 5 0.0 0.0 0.0 18.399891856907026 0.0 6 0.0 0.0 0.0 19.94297909643169 0.0 7 0.0 0.0 0.0 22.25453770875918 0.0 8 0.0 0.0 0.0 25.130570495778734 0.0 9 0.0 0.0 0.0 25.925668008897226 0.0 10 0.0 0.0 0.0 31.95751287271476 0.0 11 0.0 0.0 0.0 34.98306167842996 0.0 12 0.0 0.0 0.0 42.550210756141425 0.0 13 0.0 0.0 0.0 43.89872235489778 0.0 14 0.0 0.0 0.0 44.490232302833434 0.0 15 0.0 0.0 0.0 46.15416125609841 0.0 16 0.0 0.0 0.0 47.57067192089169 0.0 17 0.0 0.0 0.0 49.27474490109413 0.0 18 0.0 0.0 0.0 50.99438393255804 0.0 19 0.0 0.0 0.0 53.85280250367646 0.0 20 0.0 0.0 0.0 55.16772420234228 0.0 21 0.0 0.0 0.0 56.39580372028625 0.0 22 0.0 0.0 0.0 57.67959331642915 0.0 23 0.0 0.0 0.0 58.83393890734513 0.0 24 0.0 0.0 0.0 59.832623985646464 0.0 25 0.0 0.0 0.0 60.61338434628729 0.0 26 0.0 0.0 0.0 61.338434628729196 0.0 27 0.0 0.0 0.0 62.01187116225151 0.0 28 0.0 0.0 0.0 62.65745265667435 0.0 29 0.0 0.0 0.0 63.35997312807993 0.0 30 0.0 0.0 0.0 64.10796285448609 0.0 31 0.0 0.0 0.0 64.84325396012633 0.0 32 0.0 0.0 0.0 65.46139004837765 0.0 33 0.0 0.0 0.0 66.0553577938809 0.0 34 0.0 0.0 0.0 66.63990398204169 0.0 35 0.0 0.0 0.0 67.24902814587848 0.0 36 0.0 0.0 0.0 67.82128534620126 0.0 37 0.0 0.0 0.0 68.39681960994753 0.0 38 0.0 0.0 0.0 68.91418599792726 0.0 39 0.0 0.0 0.0 69.45776889329471 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAAGG 30 2.1584547E-6 45.000004 36 TAGAATA 30 2.1584547E-6 45.000004 10 TACGGGA 30 2.1584547E-6 45.000004 4 AATATTC 30 2.1584547E-6 45.000004 34 ATTGGGA 30 2.1584547E-6 45.000004 4 GCGTCTT 30 2.1584547E-6 45.000004 9 CGGACAG 25 3.8817518E-5 45.0 6 TTGGCAC 20 7.022361E-4 45.0 5 GTACCCA 20 7.022361E-4 45.0 25 TCGCAGG 25 3.8817518E-5 45.0 2 ACAAACC 25 3.8817518E-5 45.0 35 ACCGGGA 25 3.8817518E-5 45.0 4 GTTCTCG 20 7.022361E-4 45.0 1 CTCGTAC 20 7.022361E-4 45.0 29 TTTACAT 20 7.022361E-4 45.0 31 TCCTGAT 20 7.022361E-4 45.0 14 CTTTTCG 40 6.7775545E-9 45.0 1 CTTCAGC 25 3.8817518E-5 45.0 13 TTCAATC 25 3.8817518E-5 45.0 45 TACGGTT 20 7.022361E-4 45.0 33 >>END_MODULE