##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933780.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 578472 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.13559342543805 31.0 16.0 33.0 16.0 34.0 2 28.41942047324676 31.0 26.0 33.0 16.0 34.0 3 29.330591627598224 31.0 28.0 34.0 16.0 34.0 4 32.72673871855509 35.0 32.0 37.0 28.0 37.0 5 33.8520239527583 35.0 33.0 37.0 28.0 37.0 6 33.1605903137922 35.0 33.0 37.0 28.0 37.0 7 33.541353773389204 35.0 32.0 35.0 29.0 37.0 8 33.697229943713786 35.0 35.0 37.0 28.0 37.0 9 34.788838526324525 37.0 33.0 39.0 28.0 39.0 10 33.571738995145836 35.0 31.0 39.0 27.0 39.0 11 33.9451693426821 35.0 32.0 39.0 27.0 39.0 12 34.20812589027645 37.0 32.0 39.0 27.0 39.0 13 34.55776597657277 37.0 33.0 39.0 27.0 39.0 14 34.3112060739327 37.0 32.0 39.0 25.0 40.0 15 34.83372920383355 37.0 32.0 39.0 27.0 40.0 16 34.55976780207166 36.0 32.0 39.0 27.0 40.0 17 34.41882926053465 36.0 32.0 39.0 27.0 40.0 18 34.30267670691062 36.0 32.0 39.0 27.0 40.0 19 34.10991888976476 36.0 32.0 39.0 25.0 40.0 20 35.13901623587658 37.0 33.0 39.0 27.0 40.0 21 34.4425002420169 37.0 32.0 39.0 25.0 40.0 22 35.39566478584962 37.0 34.0 39.0 28.0 40.0 23 36.191691214095066 38.0 34.0 39.0 30.0 40.0 24 36.31429870417237 38.0 35.0 40.0 31.0 40.0 25 34.23802880692583 37.0 32.0 39.0 24.0 40.0 26 34.9717877442642 37.0 33.0 39.0 27.0 40.0 27 35.565252942234025 37.0 34.0 39.0 30.0 40.0 28 35.76223049689527 38.0 34.0 40.0 30.0 40.0 29 36.26646579263992 38.0 35.0 40.0 30.0 41.0 30 34.1808505856809 37.0 33.0 39.0 24.0 40.0 31 34.46005338201331 37.0 32.0 39.0 25.0 40.0 32 35.23511768936094 37.0 34.0 39.0 29.0 40.0 33 36.06606715623228 38.0 35.0 40.0 30.0 40.0 34 36.34857348324552 38.0 35.0 40.0 30.0 41.0 35 36.537535092450454 38.0 35.0 40.0 31.0 41.0 36 36.46224017757125 38.0 35.0 40.0 31.0 41.0 37 36.65988673609094 39.0 35.0 40.0 31.0 41.0 38 36.20501078703896 38.0 35.0 40.0 30.0 41.0 39 36.135913233484075 38.0 35.0 40.0 30.0 41.0 40 35.62660249761441 38.0 34.0 40.0 30.0 41.0 41 35.10708902073048 37.0 33.0 40.0 28.0 41.0 42 36.07616098964168 38.0 35.0 40.0 30.0 41.0 43 36.17933452267353 38.0 35.0 40.0 31.0 41.0 44 36.62264206392012 38.0 35.0 40.0 31.0 41.0 45 36.91080121423336 39.0 35.0 40.0 32.0 41.0 46 36.7169214758882 39.0 35.0 40.0 32.0 41.0 47 36.57203114411761 39.0 35.0 40.0 31.0 41.0 48 36.61315845883638 38.0 35.0 40.0 32.0 41.0 49 36.813491404942674 39.0 35.0 40.0 32.0 41.0 50 36.644686346098 39.0 35.0 40.0 32.0 41.0 51 36.01173609094304 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 11.0 11 13.0 12 16.0 13 19.0 14 26.0 15 39.0 16 86.0 17 144.0 18 301.0 19 564.0 20 810.0 21 1117.0 22 1460.0 23 1948.0 24 2624.0 25 3776.0 26 5100.0 27 7124.0 28 9523.0 29 13160.0 30 18412.0 31 25937.0 32 36262.0 33 47686.0 34 60129.0 35 78742.0 36 96479.0 37 100932.0 38 59678.0 39 6345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.878417624362115 3.4938596855163255 48.995284127840236 16.632438562281322 2 17.697485790150605 13.8110401194872 47.901886348863904 20.589587741498292 3 18.61196393256718 13.692970446279162 48.721113554329335 18.973952066824324 4 17.93950268984497 3.8022583634125766 54.746297141434674 23.511941805307774 5 24.21793967555906 5.06783387960005 46.95698322477146 23.757243220069423 6 20.069251407155402 12.980230676679252 48.56656847695307 18.38394943921227 7 74.66083060199975 1.567059425521028 19.011118947848814 4.760991024630406 8 73.19904852784578 9.259393713092424 10.03108188468932 7.510475874372485 9 69.02149110069286 3.9756461851221845 11.762367063574382 15.240495650610574 10 37.69966394224785 25.890967929303404 19.87079754940602 16.53857057904272 11 30.409769185025375 23.736671783595405 26.133676305854042 19.719882725525174 12 26.402487933728857 18.628559377117647 30.97176699995851 23.997185689194982 13 24.93033370673084 20.72235129790206 34.65491847487864 19.692396520488458 14 20.0448768479719 25.890276452447136 28.23991481005131 25.82493188952966 15 15.692202906968703 25.096115283021476 37.678228159703494 21.533453650306324 16 18.45845607047532 24.058208521760776 30.203536212642963 27.27979919512094 17 17.752458200224037 24.567308357189287 33.00315313446459 24.677080308122086 18 17.826791962273024 23.996839950766848 32.47832220055595 25.69804588640418 19 19.97676637762934 26.047933175676608 29.289230939440458 24.686069507253592 20 23.112441051598005 25.428542781673098 34.0574824710617 17.401533695667208 21 24.743634955538038 27.045734279273674 27.970065966892086 20.2405647982962 22 19.629126388139788 23.81169702250066 30.038791851636727 26.52038473772283 23 20.297611638938445 27.759511264157986 28.827151530238282 23.115725566665287 24 23.699159164142777 22.04410930866144 27.598051418219033 26.65868010897675 25 19.28598099821599 27.895040727986835 24.50957003969077 28.309408234106403 26 19.328852563304707 24.195639546944363 27.844908655907286 28.630599233843647 27 20.59771259455946 28.777019458158737 26.4908241021173 24.1344438451645 28 16.01408538356221 25.277109350150052 31.556410681934477 27.152394584353264 29 19.65177225518262 22.78087789901672 29.535742438700574 28.031607407100083 30 19.81962826204207 26.099966809110896 30.38695044876848 23.69345448007855 31 20.05680482374255 23.76882545741194 25.243745591835044 30.93062412701047 32 20.417410004287156 27.4110069285981 27.37729743185496 24.79428563525979 33 21.659302438147396 22.503422810438533 26.688759352224483 29.14851539918959 34 20.89936937310708 22.21196531552089 26.640010233857474 30.24865507751456 35 18.467618138820892 23.155312616686718 26.58884094649352 31.788228297998867 36 20.728747458822554 24.247500311164586 24.721507696137408 30.30224453387545 37 17.606902321979284 26.43930907632522 31.036765824447855 24.917022777247645 38 19.741318508069536 23.65092865341797 27.74222434275125 28.865528495761243 39 21.343470384046245 20.677405302244534 32.22887192465668 25.750252389052537 40 20.01825498900552 20.646634582140535 32.14122723312451 27.19388319572944 41 19.861808350274515 23.178304222157685 25.78206032444094 31.17782710312686 42 20.633150783443277 21.616603742272748 28.290046882130852 29.46019859215312 43 25.56251642257534 20.89936937310708 25.761143149538785 27.776971054778798 44 19.87615649504211 21.74037809954501 30.10430928376827 28.27915612164461 45 19.247776901907095 18.74853061168043 28.22971552642133 33.773976959991145 46 22.843802292937255 22.10323057987249 28.997427706094676 26.055539421095574 47 15.749249747610946 21.666735814352293 36.79659516795973 25.787419270077034 48 19.254864539683858 21.9727143232516 28.787218741788713 29.985202395275827 49 18.847066063698847 18.658292881937243 35.55608568781203 26.93855536655188 50 22.066409437276135 18.40797825996764 30.025480922153534 29.50013138060269 51 18.121188233829812 18.384295177640407 27.711799361075386 35.7827172274544 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 100.0 1 321.5 2 543.0 3 1459.5 4 2376.0 5 1720.0 6 1064.0 7 1024.5 8 985.0 9 1032.5 10 1080.0 11 1070.0 12 1060.0 13 1124.5 14 1189.0 15 1085.0 16 981.0 17 1022.0 18 1063.0 19 1145.0 20 1227.0 21 1296.0 22 1365.0 23 1670.0 24 1975.0 25 2361.0 26 3402.5 27 4058.0 28 5001.5 29 5945.0 30 6743.0 31 7541.0 32 8408.5 33 9276.0 34 10447.5 35 11619.0 36 13122.5 37 14626.0 38 15902.0 39 17178.0 40 19358.5 41 21539.0 42 23233.5 43 24928.0 44 27092.0 45 29256.0 46 32598.5 47 35941.0 48 65321.5 49 94702.0 50 83735.5 51 72769.0 52 69155.5 53 65542.0 54 51920.0 55 38298.0 56 32914.0 57 27530.0 58 25645.0 59 23760.0 60 21641.0 61 19522.0 62 16428.0 63 13334.0 64 10948.0 65 8562.0 66 6938.0 67 5314.0 68 4409.5 69 3505.0 70 2878.0 71 2251.0 72 1960.0 73 1669.0 74 1319.0 75 753.5 76 538.0 77 421.0 78 304.0 79 232.0 80 160.0 81 108.5 82 57.0 83 34.0 84 11.0 85 11.5 86 12.0 87 6.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 578472.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.752704291657952 #Duplication Level Percentage of deduplicated Percentage of total 1 70.2868186289468 22.317965675263434 2 12.358379200986036 7.848239205861714 3 4.734587330284913 4.510078543247014 4 2.4084681147378553 3.0590150337263218 5 1.431424803620507 2.2725804252553257 6 0.9585219926418074 1.826139923364363 7 0.7447929411207547 1.6554433012545076 8 0.5894806247274744 1.497408317010663 9 0.519148370082973 1.4835928210866762 >10 5.774832151720532 34.4664338622764 >50 0.11855372035050273 2.5559408875369765 >100 0.0623096297656117 3.4683266914110917 >500 0.004962713875137214 1.1557587202788941 >1k 0.005514126527930238 4.691319368452157 >5k 0.0011028253055860478 2.750289043802586 >10k+ 0.0011028253055860478 4.441468180171899 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGC 14282 2.4689181153106805 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCG 11085 1.9162552379371862 No Hit GAATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 9106 1.5741470632977914 No Hit GCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 6602 1.141282551273009 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCACTTCCGT 4475 0.7735897329516381 No Hit CCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 4142 0.7160242846671921 No Hit CTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCT 3473 0.6003747804560982 No Hit TCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGC 2991 0.5170518192756088 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTA 2696 0.46605540112572436 No Hit GAACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCT 2598 0.4491142181471186 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTC 2079 0.35939509604613534 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCT 2060 0.3561105809788546 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1239 0.214184956229515 No Hit TGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTGCTT 1041 0.17995685184416876 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCACTTCCGTCGT 961 0.16612731471877637 No Hit CGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 939 0.16232419200929343 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATG 839 0.14503727060255295 No Hit TCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 728 0.12584878784107095 No Hit TTCCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCT 705 0.12187279591752065 No Hit TGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCTG 672 0.11616811185329627 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTAT 664 0.11478515814075704 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6709054197955995 0.0 2 0.0 0.0 0.0 3.2487311399687453 0.0 3 0.0 0.0 0.0 4.042373701752203 0.0 4 0.0 0.0 0.0 5.533370673083572 0.0 5 0.0 0.0 0.0 8.754269869587464 0.0 6 0.0 0.0 0.0 9.574188551909167 0.0 7 0.0 0.0 0.0 10.75920701434123 0.0 8 0.0 0.0 0.0 12.279764621278126 0.0 9 0.0 0.0 0.0 12.766737197306005 0.0 10 0.0 0.0 0.0 15.89169398000249 0.0 11 0.0 0.0 0.0 18.014527928750226 0.0 12 0.0 0.0 0.0 22.369276300322227 0.0 13 0.0 0.0 0.0 23.137507087637776 0.0 14 0.0 0.0 0.0 23.464057033011105 0.0 15 0.0 0.0 0.0 24.314573566222737 0.0 16 0.0 0.0 0.0 25.200009680675986 0.0 17 0.0 0.0 0.0 26.26834142361255 0.0 18 0.0 0.0 0.0 27.323189367851857 0.0 19 0.0 0.0 0.0 28.9644096862078 0.0 20 0.0 0.0 0.0 29.93265015419934 0.0 21 0.0 0.0 0.0 31.047483715720034 0.0 22 0.0 0.0 0.0 32.37287197997483 0.0 23 0.0 0.0 0.0 33.549592720131656 0.0 24 0.0 0.0 0.0 34.48343221452378 0.0 25 0.0 0.0 0.0 35.29747334356719 0.0 26 0.0 0.0 0.0 35.97909665463497 0.0 27 0.0 0.0 0.0 36.66763473426544 0.0 28 0.0 0.0 0.0 37.3738054737308 0.0 29 0.0 0.0 0.0 38.128379593135016 0.0 30 0.0 0.0 0.0 38.91441590949951 0.0 31 0.0 0.0 0.0 39.635107662946524 0.0 32 0.0 0.0 0.0 40.385878659641264 0.0 33 0.0 0.0 0.0 41.07026787813412 0.0 34 0.0 0.0 0.0 41.74774232806428 0.0 35 0.0 0.0 0.0 42.43991066119017 0.0 36 0.0 0.0 0.0 43.178926551328324 0.0 37 0.0 0.0 0.0 43.955455060919114 0.0 38 0.0 0.0 0.0 44.648487740115335 0.0 39 0.0 0.0 0.0 45.3721182702015 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGTG 30 2.1636242E-6 45.000004 17 TCGATGG 65 0.0 45.000004 2 CGTATGG 35 1.2105374E-7 45.0 2 GTGGCGT 20 7.0303783E-4 45.0 34 TGCGCCG 20 7.0303783E-4 45.0 1 TCTACCG 20 7.0303783E-4 45.0 1 TACGGCT 1685 0.0 42.59644 7 TGATACG 3205 0.0 41.911076 4 GATACGG 3220 0.0 41.85559 5 TTTCGCG 140 0.0 41.785713 1 ATACGGC 3210 0.0 41.775703 6 ATGATAC 4495 0.0 41.59622 3 GGTGCGC 65 0.0 41.538464 8 CGCCGGT 65 0.0 41.538464 28 ACGGCTG 1735 0.0 41.368877 8 CGACCAC 970 0.0 41.28866 12 TCGTTTG 240 0.0 41.250004 1 ACACGAC 60 3.6379788E-12 41.250004 26 CACGACC 60 3.6379788E-12 41.250004 27 TCAAGCG 60 3.6379788E-12 41.250004 17 >>END_MODULE