##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933777.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 914166 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.675801769044135 31.0 25.0 33.0 16.0 34.0 2 29.083096505448683 31.0 28.0 34.0 16.0 34.0 3 30.034714701706253 31.0 30.0 34.0 23.0 34.0 4 33.11042524005487 35.0 32.0 37.0 28.0 37.0 5 33.96943005974845 35.0 33.0 37.0 28.0 37.0 6 33.51383993716677 35.0 33.0 37.0 28.0 37.0 7 33.589589855671726 35.0 32.0 35.0 29.0 37.0 8 34.01377102189318 35.0 35.0 37.0 30.0 37.0 9 34.87600173272688 37.0 34.0 39.0 28.0 39.0 10 33.47000872926799 35.0 31.0 39.0 27.0 39.0 11 33.98023881877033 35.0 32.0 39.0 27.0 39.0 12 34.31885128083959 37.0 32.0 39.0 27.0 39.0 13 34.73421894929367 37.0 34.0 39.0 27.0 39.0 14 34.48579798417355 37.0 32.0 39.0 25.0 40.0 15 34.945457389576944 37.0 32.0 39.0 27.0 40.0 16 34.6698827127677 36.0 32.0 39.0 27.0 40.0 17 34.543029384159986 36.0 32.0 39.0 27.0 40.0 18 34.433730854133714 37.0 32.0 39.0 27.0 40.0 19 34.27919874508569 37.0 32.0 39.0 25.0 40.0 20 35.49188659390089 37.0 34.0 39.0 30.0 40.0 21 34.636293627196814 37.0 32.0 39.0 25.0 40.0 22 35.51193109347755 37.0 34.0 39.0 29.0 40.0 23 36.45541838134431 38.0 35.0 40.0 31.0 41.0 24 36.52914022179779 38.0 35.0 40.0 31.0 41.0 25 34.35830910359825 37.0 32.0 39.0 24.0 40.0 26 34.99436426207056 37.0 33.0 39.0 27.0 40.0 27 35.75714585753572 37.0 34.0 39.0 30.0 40.0 28 35.89676929572966 38.0 34.0 40.0 30.0 41.0 29 36.46258885147774 38.0 35.0 40.0 30.0 41.0 30 34.18119138099645 37.0 33.0 39.0 24.0 40.0 31 34.95084590763603 37.0 33.0 39.0 27.0 40.0 32 35.494694617826525 37.0 34.0 39.0 30.0 40.0 33 36.41696256478583 38.0 35.0 40.0 31.0 41.0 34 36.751043027196374 38.0 35.0 40.0 31.0 41.0 35 36.88121632176213 39.0 35.0 40.0 32.0 41.0 36 36.80408044053268 39.0 35.0 40.0 31.0 41.0 37 37.01395807763579 39.0 35.0 40.0 32.0 41.0 38 36.51391213412006 38.0 35.0 40.0 31.0 41.0 39 36.42225700802699 38.0 35.0 40.0 31.0 41.0 40 36.00272707582649 38.0 34.0 40.0 30.0 41.0 41 35.63524677137413 38.0 34.0 40.0 30.0 41.0 42 36.41814506336924 38.0 35.0 40.0 31.0 41.0 43 36.44696915002308 38.0 35.0 40.0 31.0 41.0 44 36.858076104339915 39.0 35.0 40.0 32.0 41.0 45 37.09144072301967 39.0 35.0 40.0 33.0 41.0 46 36.83198784465841 39.0 35.0 40.0 32.0 41.0 47 36.763911587173446 39.0 35.0 40.0 32.0 41.0 48 36.75990575015916 39.0 35.0 40.0 32.0 41.0 49 36.91278170485448 39.0 35.0 40.0 32.0 41.0 50 36.76421897117154 39.0 35.0 40.0 32.0 41.0 51 35.99699398139944 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 14.0 11 19.0 12 34.0 13 29.0 14 38.0 15 63.0 16 99.0 17 202.0 18 355.0 19 653.0 20 981.0 21 1376.0 22 2036.0 23 2820.0 24 3980.0 25 5386.0 26 7447.0 27 10231.0 28 13591.0 29 18551.0 30 26262.0 31 36825.0 32 52381.0 33 69887.0 34 89314.0 35 120721.0 36 158112.0 37 173120.0 38 107590.0 39 12038.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.3099196426032 3.68685774793637 51.36145951610539 17.64176309335504 2 19.474362424329936 9.380134461356034 51.061404602665164 20.084098511648868 3 20.18079867332629 8.945968237716126 49.94038281887534 20.93285027008224 4 19.31159111146116 4.204925582443451 52.442991754232814 24.040491551862573 5 22.025758997818777 5.41083348100892 47.13378095444372 25.42962656672858 6 21.458028410595013 9.965804897578776 50.36109415576602 18.21507253606019 7 79.03630194078536 2.202663411240409 14.185607427972599 4.575427220001619 8 78.72355786585807 6.435592660413973 8.608611565076803 6.232237908651165 9 73.63870456787936 4.815755562994029 10.446680362209927 11.098859506916686 10 39.23466853941188 24.952251560438697 18.72438922471411 17.088690675435313 11 28.296283169577517 25.562206426403954 25.793674234220042 20.347836169798484 12 25.382589157767843 21.183351820128948 30.916923184629486 22.51713583747372 13 24.028239947668148 21.942404333567424 33.84822887746864 20.181126841295782 14 21.19286869124426 24.803153912965477 29.94193614726428 24.06204124852598 15 18.030532747881676 24.84373735185951 35.53227750758615 21.593452392672667 16 20.163405770943132 24.426417083986934 30.2577431232402 25.152434021829734 17 19.930625291249076 24.802606966349654 31.01635807938602 24.25040966301525 18 19.830315281907225 23.892815965590493 31.752767002929446 24.524101749572836 19 21.677244614216672 25.62991841744278 29.364360520955714 23.32847644738483 20 23.521548602770174 25.363774194183552 32.258583233242106 18.85609396980417 21 24.63819481363341 25.751449955478545 29.092746831538253 20.51760839934979 22 21.293288089909275 24.165523548239598 29.485892058991475 25.055296302859652 23 21.428165125371105 25.83217927597395 28.368151954896593 24.371503643758356 24 22.98729114843475 23.02328023575587 27.977194513906667 26.01223410190272 25 20.41806411527009 26.201040073684652 26.51433109522778 26.866564715817475 26 19.83020589258406 25.722789952809443 28.5028102117121 25.9441939428944 27 21.01281386531549 26.039690822017008 29.617596804081536 23.329898508585966 28 17.816129674479253 26.745798903043866 31.158892367469367 24.279179055007518 29 20.388200830046184 23.927820549003133 29.326402425817633 26.35757619513305 30 20.736824602971453 24.9503919419449 31.093039994924336 23.219743460159314 31 22.23316115453867 27.74889899646235 26.334166879975847 23.68377296902313 32 20.767016056164856 30.657779878052782 26.03345563059663 22.54174843518573 33 20.434910071037425 25.30590724222953 27.311122925158017 26.94805976157503 34 22.83108319495584 25.800018814963583 27.016209309906515 24.35268868017406 35 19.492739830621574 25.07553332764509 27.920749623153785 27.51097721857956 36 19.667762747684776 26.15378388607758 27.596410279971035 26.58204308626661 37 19.337844549020637 28.025107037452717 30.76946637700374 21.867582036522908 38 19.389038752261627 30.11881868282128 27.322608804090287 23.16953376082681 39 22.216643366740833 25.50335497054145 29.26678524469298 23.013216418024733 40 21.399833290671495 23.99815788379791 31.599293782529653 23.002715043000943 41 21.016533102303082 25.905688901140493 27.08829687387192 25.9894811226845 42 19.213797056552092 25.71053834861502 29.09613790055635 25.979526694276533 43 20.451427858835267 23.349479197432412 28.239181942885644 27.95991100084667 44 20.240962801066765 23.1902083429049 29.9511248504101 26.617704005618236 45 20.97780928190285 22.755604561972333 27.884322978540006 28.382263177584814 46 22.539888816691935 24.87775743136367 28.817632683779532 23.764721068164864 47 17.516402929008517 24.494676021641585 33.981027515790345 24.007893533559553 48 19.04358726970813 24.91691880905656 29.69405994097352 26.345433980261788 49 19.626194804882264 23.468057223742733 32.75203847003717 24.15370950133783 50 21.071774710501156 22.072358849486854 29.340294869859523 27.51557157015247 51 19.065355745017865 22.40927796483352 27.812235414574594 30.71313087557402 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 165.0 1 604.0 2 1043.0 3 2038.0 4 3033.0 5 2214.0 6 1395.0 7 1409.0 8 1423.0 9 1475.0 10 1527.0 11 1555.0 12 1583.0 13 1604.0 14 1625.0 15 1564.0 16 1503.0 17 1542.5 18 1582.0 19 1809.5 20 2037.0 21 2186.0 22 2335.0 23 3005.0 24 3675.0 25 4216.5 26 5939.5 27 7121.0 28 8695.5 29 10270.0 30 12106.5 31 13943.0 32 15506.0 33 17069.0 34 19599.0 35 22129.0 36 24507.5 37 26886.0 38 28489.0 39 30092.0 40 35101.5 41 40111.0 42 47116.0 43 54121.0 44 84929.0 45 115737.0 46 111812.0 47 107887.0 48 104661.0 49 101435.0 50 86103.5 51 70772.0 52 63122.5 53 55473.0 54 49234.5 55 42996.0 56 39721.5 57 36447.0 58 35522.5 59 34598.0 60 32859.5 61 31121.0 62 26890.5 63 22660.0 64 19373.5 65 16087.0 66 13083.0 67 10079.0 68 8776.5 69 7474.0 70 6143.5 71 4813.0 72 3826.5 73 2840.0 74 2431.5 75 1616.0 76 1209.0 77 900.5 78 592.0 79 475.5 80 359.0 81 239.0 82 119.0 83 66.5 84 14.0 85 9.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 914166.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.35941082607571 #Duplication Level Percentage of deduplicated Percentage of total 1 70.22535085781196 21.320002770976217 2 12.114447722485854 7.355749906759307 3 4.85532690552868 4.422145926595323 4 2.4508906638014283 2.9763038620856395 5 1.4012532471704744 2.127061150111053 6 0.9054558929402976 1.6493464463199432 7 0.6569648710378495 1.3961546492696546 8 0.5475395126837703 1.3298381607260703 9 0.4438395249097128 1.2127235829825813 >10 6.169776693757834 41.6710225418593 >50 0.15934799921925594 3.099907726192238 >100 0.06066918343653616 3.312611279314907 >500 0.0040202470951920975 0.8568073789606263 >1k 0.0032892930778844432 2.5585497735629477 >5k 0.001461908034615308 3.301848482661269 >10k+ 3.65477008653827E-4 1.4099263616229836 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGC 12707 1.390010129451325 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCG 9939 1.0872204829319838 No Hit GAATCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTC 8466 0.9260900099106727 No Hit GCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 6192 0.6773386890345954 TruSeq Adapter, Index 15 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 5161 0.564558296851994 TruSeq Adapter, Index 15 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCT 4302 0.47059286825368696 TruSeq Adapter, Index 14 (95% over 22bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTAATGACT 3819 0.41775782516523263 No Hit TCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGC 3315 0.36262560629032364 TruSeq Adapter, Index 15 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCT 2540 0.2778488808378347 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTAATGACTCGTA 2434 0.2662536125823975 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTC 2016 0.22052887549963573 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCT 1868 0.20433925567128947 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1490 0.16299009151510777 No Hit TGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTGCTT 1275 0.13947138703473985 TruSeq Adapter, Index 15 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTCTG 960 0.10501375023792177 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.534038675689098 0.0 2 0.0 0.0 0.0 2.2803298306872057 0.0 3 0.0 0.0 0.0 2.8734387408851347 0.0 4 0.0 0.0 0.0 3.9687540337312917 0.0 5 0.0 0.0 0.0 6.130287059461848 0.0 6 0.0 0.0 0.0 6.8674617082674265 0.0 7 0.0 0.0 0.0 7.782175228568991 0.0 8 0.0 0.0 0.0 9.039824276991268 0.0 9 0.0 0.0 0.0 9.491711570983826 0.0 10 0.0 0.0 0.0 11.552168862110383 0.0 11 0.0 0.0 0.0 13.540538589271533 0.0 12 0.0 0.0 0.0 16.609018493358974 0.0 13 0.0 0.0 0.0 17.287451075625214 0.0 14 0.0 0.0 0.0 17.539484076196228 0.0 15 0.0 0.0 0.0 18.140687796308328 0.0 16 0.0 0.0 0.0 18.934635503836283 0.0 17 0.0 0.0 0.0 19.950205980095518 0.0 18 0.0 0.0 0.0 20.969495693342346 0.0 19 0.0 0.0 0.0 22.156698017646686 0.0 20 0.0 0.0 0.0 23.030937488377383 0.0 21 0.0 0.0 0.0 24.16388270839213 0.0 22 0.0 0.0 0.0 25.35666388817786 0.0 23 0.0 0.0 0.0 26.485014756619695 0.0 24 0.0 0.0 0.0 27.379491252135825 0.0 25 0.0 0.0 0.0 28.186456289120358 0.0 26 0.0 0.0 0.0 28.904706585018477 0.0 27 0.0 0.0 0.0 29.597031611326607 0.0 28 0.0 0.0 0.0 30.286950072525123 0.0 29 0.0 0.0 0.0 31.01296701036792 0.0 30 1.0938932316450185E-4 0.0 0.0 31.80024196918284 0.0 31 1.0938932316450185E-4 0.0 0.0 32.53971379377487 0.0 32 1.0938932316450185E-4 0.0 0.0 33.28049829024488 0.0 33 1.0938932316450185E-4 0.0 0.0 34.00093637260629 0.0 34 1.0938932316450185E-4 0.0 0.0 34.697746361164164 0.0 35 1.0938932316450185E-4 0.0 0.0 35.37169398118066 0.0 36 1.0938932316450185E-4 0.0 0.0 36.107555958108264 0.0 37 1.0938932316450185E-4 0.0 0.0 36.84976251577941 0.0 38 1.0938932316450185E-4 0.0 0.0 37.56987243017132 0.0 39 1.0938932316450185E-4 0.0 0.0 38.248961348376554 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATA 20 7.032527E-4 45.000004 12 CACTACG 20 7.032527E-4 45.000004 34 CGAATTA 20 7.032527E-4 45.000004 43 GCGATTA 20 7.032527E-4 45.000004 9 ACCGTTT 20 7.032527E-4 45.000004 15 CAGTCGA 20 7.032527E-4 45.000004 10 ATCGACG 20 7.032527E-4 45.000004 16 AGTCGAT 20 7.032527E-4 45.000004 11 ACACGAT 45 3.8380676E-10 45.0 15 GGTCGAC 25 3.8901766E-5 45.0 8 CTCGTAA 80 0.0 42.187504 33 TACGGCT 1400 0.0 41.946426 7 CGGTAGT 65 0.0 41.53846 12 CTTTGCG 285 0.0 41.05263 1 ACGGCTG 1435 0.0 40.923347 8 GTACACG 55 6.002665E-11 40.909092 13 CACGATC 50 1.0804797E-9 40.5 16 TACACGA 50 1.0804797E-9 40.5 14 TGGGACG 195 0.0 40.384617 6 AGCGGGA 190 0.0 40.263157 4 >>END_MODULE