##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933775.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 510127 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.14720451965883 31.0 16.0 33.0 16.0 34.0 2 28.22668864812096 31.0 25.0 33.0 16.0 34.0 3 29.044312494731702 31.0 28.0 34.0 16.0 34.0 4 32.58451522856073 35.0 32.0 37.0 27.0 37.0 5 33.847767320686806 35.0 33.0 37.0 28.0 37.0 6 33.0253191852225 35.0 33.0 37.0 27.0 37.0 7 33.69706563267579 35.0 32.0 36.0 30.0 37.0 8 33.57139692664768 35.0 35.0 37.0 28.0 37.0 9 34.84920813836555 37.0 33.0 39.0 29.0 39.0 10 34.05876967892309 35.0 32.0 39.0 27.0 39.0 11 34.6394172431571 37.0 33.0 39.0 27.0 39.0 12 34.559848821960024 37.0 33.0 39.0 27.0 39.0 13 34.99558737334036 37.0 34.0 39.0 30.0 39.0 14 34.60900912909923 37.0 33.0 39.0 27.0 40.0 15 35.068984782220895 37.0 33.0 39.0 27.0 40.0 16 34.38966375039941 36.0 32.0 39.0 27.0 40.0 17 34.40233902537995 36.0 32.0 38.0 27.0 40.0 18 34.43263148196429 37.0 32.0 39.0 27.0 40.0 19 34.11813724817546 36.0 32.0 39.0 26.0 40.0 20 35.247375653513735 37.0 33.0 39.0 29.0 40.0 21 34.54827131282994 37.0 32.0 39.0 26.0 40.0 22 35.604767048205645 37.0 34.0 39.0 30.0 40.0 23 36.39602295114746 38.0 35.0 39.0 31.0 40.0 24 36.53466881776499 38.0 35.0 40.0 31.0 40.0 25 34.46289061351389 37.0 32.0 39.0 25.0 40.0 26 34.994272014615966 37.0 33.0 39.0 27.0 40.0 27 35.891266292511474 37.0 34.0 39.0 30.0 40.0 28 35.94340624981622 38.0 34.0 40.0 30.0 40.0 29 36.60837987403137 38.0 35.0 40.0 31.0 41.0 30 34.5500473411523 37.0 33.0 39.0 25.0 40.0 31 35.2871481023353 37.0 34.0 39.0 27.0 40.0 32 35.58968452953872 37.0 34.0 39.0 30.0 40.0 33 36.29210569132785 38.0 35.0 40.0 30.0 40.0 34 36.60179131863242 38.0 35.0 40.0 31.0 41.0 35 36.84595600703354 39.0 35.0 40.0 31.0 41.0 36 36.58400947215105 38.0 35.0 40.0 31.0 41.0 37 36.941277368184785 39.0 35.0 40.0 31.0 41.0 38 36.45105826588281 38.0 35.0 40.0 30.0 41.0 39 36.37484979230662 38.0 35.0 40.0 31.0 41.0 40 36.052134076416266 38.0 35.0 40.0 30.0 41.0 41 35.453057767967586 37.0 34.0 40.0 30.0 41.0 42 36.42681920384532 38.0 35.0 40.0 31.0 41.0 43 36.300599654595814 38.0 35.0 40.0 31.0 41.0 44 36.87604263252092 39.0 35.0 40.0 32.0 41.0 45 37.162132174928985 39.0 36.0 40.0 33.0 41.0 46 36.89521824957315 39.0 35.0 40.0 32.0 41.0 47 36.72263965639929 39.0 35.0 40.0 31.0 41.0 48 36.823514536576184 39.0 35.0 40.0 32.0 41.0 49 37.033370121557965 39.0 35.0 40.0 32.0 41.0 50 36.689694919108376 39.0 35.0 40.0 31.0 41.0 51 35.98456658832016 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 13.0 11 15.0 12 15.0 13 23.0 14 17.0 15 27.0 16 52.0 17 100.0 18 181.0 19 275.0 20 465.0 21 704.0 22 1024.0 23 1357.0 24 1828.0 25 2812.0 26 3825.0 27 5484.0 28 7292.0 29 10439.0 30 15002.0 31 21543.0 32 30117.0 33 40582.0 34 52802.0 35 71446.0 36 90063.0 37 93854.0 38 53581.0 39 5181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.54631493726072 3.789056450648564 48.85763741186018 16.80699120023053 2 16.918924111054697 16.225371329100398 46.88322711795298 19.972477441891918 3 15.954262369958853 16.048160556096818 48.349920706020264 19.647656367924064 4 18.963709037161333 3.437379319267555 56.49083463529671 21.10807700827441 5 25.619306564835814 4.4798648179767 46.0881309948307 23.812697622356787 6 18.115488888061208 14.603226255422669 47.896504203855116 19.384780652661004 7 68.39767352051548 1.251649099145899 23.74389122708659 6.606786153252034 8 66.10040244880196 10.63695903177052 12.428081634573351 10.834556884854164 9 61.79206354496037 3.6042005226149567 15.985823138159713 18.617912794264956 10 32.64540006704213 23.064060518263098 24.895761251609894 19.394778163084876 11 25.18627714275073 24.70443634624319 29.021204523579424 21.08808198742666 12 19.542584493665302 19.447902189062724 35.15065856149547 25.858854755776502 13 20.516459626720405 23.806816733872154 37.779611743742244 17.897111895665198 14 17.362147073179816 26.85292093929551 29.58400555155873 26.200926435965943 15 12.009362374467534 26.33579481188018 39.946915179945385 21.7079276337069 16 13.79264379262419 26.218569101419842 28.343726170149786 31.64506093580618 17 14.830228550929474 27.027387297672934 32.948265824000686 25.194118327396904 18 14.816898537030976 23.08052700602007 35.80265306482504 26.29992139212392 19 15.0291986113262 25.806514848263273 32.274119974045675 26.890166566364847 20 17.007921556788798 26.168777578916625 38.16853450219259 18.654766362101988 21 20.278087613476643 28.936911788633026 29.856486718013358 20.928513879876974 22 15.740394058734394 24.091451736528356 32.11690422188984 28.05124998284741 23 16.243013994554296 27.693495933365615 29.89039984160807 26.173090230472017 24 21.189625328594644 22.434609420791293 28.249827984011826 28.125937266602236 25 15.009791679326911 28.98121448188392 26.78274233671223 29.226251502076934 26 15.399498556241879 22.825492475403184 35.37707276815381 26.397936200201126 27 17.47133556937782 26.01313006369002 32.46681708672546 24.048717280206695 28 13.082232463680613 27.114032388013182 35.434509445687056 24.36922570261915 29 20.529397581386597 19.938760347913362 33.13370984088276 26.39813222981728 30 18.351900605143427 25.148835486065234 32.62285666118437 23.876407247606966 31 24.782456133472643 26.304430073295475 25.317616985574183 23.5954968076577 32 26.009993589831552 26.714131971058187 26.320112442587828 20.955761996522433 33 18.680054182585906 21.44113132612075 29.308191881629476 30.570622609663868 34 25.15314813762063 21.537773926884874 31.093825655179984 22.21525228031451 35 20.860099543839084 19.174636904143476 32.046137530458104 27.919126021559336 36 19.62197648820784 23.284985895669116 35.46665830273638 21.626379313386668 37 21.698714241747645 22.30072119295783 37.17701670368359 18.82354786161093 38 21.317632667943474 27.446302587394904 26.04684715766858 25.18921758699304 39 27.2502729712405 20.129301134815446 31.06422518314067 21.556200710803388 40 25.738296541841542 18.870594969487993 29.352298545264215 26.03880994340625 41 24.38863263461844 21.44211147420152 29.24683461177315 24.92242127940689 42 24.09929292117453 18.404240512656653 33.66769451528737 23.828772050881447 43 22.548502627777005 18.838054053206356 33.741009591729124 24.87243372728752 44 20.290437479294372 19.041924854006943 33.42814632434668 27.239491342352 45 21.160220886171484 18.005124214166276 29.15685701795827 31.677797881703967 46 26.930352637676503 19.842901865613857 31.43197674304634 21.794768753663305 47 16.600768044036094 18.7110268619383 40.92921958649513 23.75898550753048 48 21.491510937472434 20.6807324450578 30.653739166913336 27.17401745055643 49 21.683227902071444 15.894277307415605 38.988918445798795 23.43357634471416 50 24.795786147371146 14.663799406814382 32.675588627929905 27.864825817884565 51 20.591538969707543 15.228364701339078 29.041787633275636 35.13830869567774 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 102.0 1 228.5 2 355.0 3 1126.5 4 1898.0 5 1297.0 6 696.0 7 732.5 8 769.0 9 925.0 10 1081.0 11 1068.5 12 1056.0 13 1090.5 14 1125.0 15 1087.5 16 1050.0 17 1052.0 18 1054.0 19 1108.0 20 1162.0 21 1681.0 22 2200.0 23 2170.5 24 2141.0 25 2309.0 26 2820.0 27 3163.0 28 3983.0 29 4803.0 30 5491.0 31 6179.0 32 7081.0 33 7983.0 34 9119.5 35 10256.0 36 11410.5 37 12565.0 38 14149.0 39 15733.0 40 18175.0 41 20617.0 42 23173.0 43 25729.0 44 30650.0 45 35571.0 46 69956.0 47 104341.0 48 93041.0 49 81741.0 50 75976.0 51 70211.0 52 51921.5 53 33632.0 54 26658.5 55 19685.0 56 16241.5 57 12798.0 58 10998.0 59 9198.0 60 7705.0 61 6212.0 62 5525.5 63 4839.0 64 3919.5 65 3000.0 66 2454.5 67 1909.0 68 1552.0 69 1195.0 70 966.5 71 738.0 72 564.5 73 391.0 74 306.5 75 173.5 76 125.0 77 90.0 78 55.0 79 40.0 80 25.0 81 22.5 82 20.0 83 19.0 84 18.0 85 12.0 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 510127.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.958906965104806 #Duplication Level Percentage of deduplicated Percentage of total 1 67.47837279622979 20.89056665555137 2 13.573857977847267 8.404636125874383 3 5.751865169003707 5.342143759290377 4 2.997393608999259 3.7118411951523123 5 1.8623423151317713 2.88280412356712 6 1.225282533848652 2.2760044782832973 7 0.9173596674712743 1.9880316819147863 8 0.729319688319832 1.806315230281033 9 0.6315894337152911 1.759798666668143 >10 4.6048636602360205 24.559040359695178 >50 0.12411267119169202 2.676008606563863 >100 0.08700682104159851 5.016897195193741 >500 0.005118048296564619 1.1689588332425371 >1k 0.00703731640777635 4.835076759931687 >5k 0.0031987801853528867 7.180322701040613 >10k+ 0.0012795120741411548 5.501553627749568 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGC 15104 2.9608313223961877 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCG 12673 2.4842833255248205 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTC 9961 1.9526510065140639 No Hit CCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 7861 1.5409888125898061 No Hit GCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 7786 1.5262865913782253 No Hit CTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCT 5634 1.104430857413938 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTAGCGGTT 5011 0.9823044065497416 No Hit TCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC 4787 0.938393772531154 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTA 3310 0.6488580294710925 No Hit GAACTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCT 3170 0.6214138832094752 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCT 2721 0.5333965855561458 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTC 2660 0.5214387789707269 No Hit TGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGCTT 1623 0.31815606701860516 Illumina Single End Adapter 1 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTG 1541 0.30208163849394365 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1204 0.23601965784990794 No Hit TTCCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCT 1155 0.22641420665834194 No Hit TCCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTG 1129 0.22131743663832731 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGT 1112 0.21798493316370235 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATG 972 0.19054078690208517 No Hit TTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTG 834 0.16348869987277678 No Hit TGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTG 817 0.16015619639815185 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTAT 804 0.1576078113881445 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTTAGCGGT 653 0.12800733934882882 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCC 650 0.1274192505003656 No Hit CGTTCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTC 630 0.12349865817727743 No Hit TGCCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCT 542 0.10624805195568947 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.2461602698935754 0.0 2 0.0 0.0 0.0 5.605466873935314 0.0 3 0.0 0.0 0.0 6.99394464515699 0.0 4 0.0 0.0 0.0 9.33904694321218 0.0 5 0.0 0.0 0.0 13.720308864263213 0.0 6 0.0 0.0 0.0 15.068992623405544 0.0 7 0.0 0.0 0.0 16.852666100794508 0.0 8 0.0 0.0 0.0 19.203453257718177 0.0 9 0.0 0.0 0.0 19.942876969852605 0.0 10 0.0 0.0 0.0 24.095372328851443 0.0 11 0.0 0.0 0.0 27.012293017229045 0.0 12 0.0 0.0 0.0 32.50857139496635 0.0 13 0.0 0.0 0.0 33.59026281690638 0.0 14 0.0 0.0 0.0 34.01760738012299 0.0 15 0.0 0.0 0.0 35.18633595163557 0.0 16 0.0 0.0 0.0 36.4283795995899 0.0 17 0.0 0.0 0.0 38.12540798663862 0.0 18 0.0 0.0 0.0 39.87379613311979 0.0 19 0.0 0.0 0.0 42.1418587920263 0.0 20 0.0 0.0 0.0 43.46878326377549 0.0 21 0.0 0.0 0.0 45.05779933232313 0.0 22 0.0 0.0 0.0 46.70993693727248 0.0 23 0.0 0.0 0.0 48.18898039115749 0.0 24 0.0 0.0 0.0 49.318307009823044 0.0 25 0.0 0.0 0.0 50.32374291107901 0.0 26 0.0 0.0 0.0 51.171767030562975 0.0 27 0.0 0.0 0.0 52.03390528241007 0.0 28 0.0 0.0 0.0 52.863698647591676 0.0 29 0.0 0.0 0.0 53.78307754735585 0.0 30 0.0 0.0 0.0 54.73107677107858 0.0 31 0.0 0.0 0.0 55.60105620757184 0.0 32 0.0 0.0 0.0 56.38674290911871 0.0 33 0.0 0.0 0.0 57.18595565418023 0.0 34 0.0 0.0 0.0 57.96536940801016 0.0 35 0.0 0.0 0.0 58.7653662715363 0.0 36 0.0 0.0 0.0 59.50361380597381 0.0 37 0.0 0.0 0.0 60.179327892858055 0.0 38 0.0 0.0 0.0 60.931493530042516 0.0 39 0.0 0.0 0.0 61.677582249126196 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGAT 20 7.029592E-4 45.000004 22 TCGTTGA 20 7.029592E-4 45.000004 24 ACCGGCG 30 2.1631186E-6 45.000004 20 CTCCGAC 20 7.029592E-4 45.000004 20 ACGTTGA 40 6.8030204E-9 45.000004 28 ACTTGCG 20 7.029592E-4 45.000004 1 ACAGGCG 20 7.029592E-4 45.000004 33 CTACGTA 80 0.0 45.000004 14 CCTCACG 40 6.8030204E-9 45.000004 24 GTCCGCG 40 6.8030204E-9 45.000004 1 TCTCCCG 20 7.029592E-4 45.000004 1 TTCGATA 20 7.029592E-4 45.000004 23 CGTCATA 20 7.029592E-4 45.000004 38 CGATAAG 20 7.029592E-4 45.000004 25 TACGTAT 80 0.0 45.000004 15 GTACGGC 20 7.029592E-4 45.000004 9 TTTAGCG 35 1.2101555E-7 45.0 1 TACTTGG 35 1.2101555E-7 45.0 2 TTCGTAC 55 1.8189894E-12 45.0 33 CGTTCAT 25 3.887745E-5 45.0 17 >>END_MODULE