##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933774.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 440932 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.898825669264195 31.0 16.0 33.0 16.0 34.0 2 28.11425571289904 31.0 25.0 33.0 16.0 34.0 3 29.011162718968006 31.0 28.0 34.0 16.0 34.0 4 32.50683552112344 35.0 32.0 37.0 26.0 37.0 5 33.78685602315096 35.0 33.0 37.0 28.0 37.0 6 32.935502526466664 35.0 33.0 37.0 26.0 37.0 7 33.56571081255159 35.0 32.0 35.0 29.0 37.0 8 33.42252093293297 35.0 33.0 37.0 28.0 37.0 9 34.71401259151071 37.0 32.0 39.0 28.0 39.0 10 33.59344978364011 35.0 31.0 39.0 27.0 39.0 11 34.23903459036767 37.0 32.0 39.0 27.0 39.0 12 34.334913319967704 37.0 32.0 39.0 27.0 39.0 13 34.67518120707955 37.0 34.0 39.0 27.0 39.0 14 34.458970997795575 37.0 32.0 39.0 25.0 40.0 15 34.84610325401649 37.0 32.0 39.0 27.0 40.0 16 34.29965845073617 36.0 32.0 39.0 27.0 40.0 17 34.32246015258588 36.0 32.0 38.0 27.0 40.0 18 34.263249208494734 36.0 32.0 39.0 27.0 40.0 19 33.91154418368365 36.0 32.0 39.0 25.0 40.0 20 34.97826422214763 37.0 33.0 39.0 27.0 40.0 21 34.461395407908704 37.0 32.0 39.0 25.0 40.0 22 35.37140420745149 37.0 34.0 39.0 28.0 40.0 23 36.19193208930175 38.0 34.0 39.0 30.0 40.0 24 36.33974853265356 38.0 35.0 40.0 31.0 40.0 25 34.36385429045748 37.0 32.0 39.0 25.0 40.0 26 35.06445438298876 37.0 33.0 39.0 27.0 40.0 27 35.428426605462974 37.0 34.0 39.0 30.0 40.0 28 35.48305180844212 38.0 34.0 39.0 29.0 40.0 29 36.03357660591656 38.0 34.0 40.0 30.0 41.0 30 33.89163862001397 37.0 32.0 39.0 24.0 40.0 31 34.67789817931109 37.0 33.0 39.0 26.0 40.0 32 35.09322752714704 37.0 33.0 39.0 29.0 40.0 33 35.784565420518355 38.0 34.0 39.0 30.0 40.0 34 36.13303411863961 38.0 35.0 40.0 30.0 41.0 35 36.419026062975696 38.0 35.0 40.0 31.0 41.0 36 36.27186051363929 38.0 35.0 40.0 30.0 41.0 37 36.52547331561329 38.0 35.0 40.0 31.0 41.0 38 35.73365734398955 38.0 34.0 40.0 30.0 41.0 39 35.74863244219063 38.0 34.0 40.0 30.0 41.0 40 35.287738245353026 37.0 34.0 40.0 28.0 41.0 41 34.89493618063556 37.0 33.0 39.0 27.0 40.0 42 35.88639518111636 38.0 34.0 40.0 30.0 41.0 43 35.93623733364782 38.0 34.0 40.0 30.0 41.0 44 36.374073553291666 38.0 35.0 40.0 31.0 41.0 45 36.5630777534858 38.0 35.0 40.0 31.0 41.0 46 36.30709043571344 38.0 35.0 40.0 31.0 41.0 47 36.030186060435625 38.0 35.0 40.0 30.0 41.0 48 36.15882040768191 38.0 35.0 40.0 31.0 41.0 49 36.33052488819138 38.0 35.0 40.0 31.0 41.0 50 36.08263859279889 38.0 35.0 40.0 31.0 41.0 51 35.33093084647973 37.0 34.0 40.0 29.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 10.0 11 8.0 12 19.0 13 18.0 14 23.0 15 34.0 16 40.0 17 109.0 18 189.0 19 354.0 20 629.0 21 853.0 22 1129.0 23 1532.0 24 2242.0 25 3113.0 26 4437.0 27 5919.0 28 8113.0 29 11066.0 30 15456.0 31 21567.0 32 29042.0 33 37844.0 34 46571.0 35 60336.0 36 73619.0 37 73252.0 38 39707.0 39 3697.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.42926346919707 4.111971914036632 46.86074043163118 16.598024185135124 2 17.555314651692324 16.10044179147805 45.6823274337086 20.661916123121024 3 17.95129407709125 16.070505202616275 46.87797664946069 19.100224070831786 4 18.870483430551648 3.8035343318244084 54.55467056144712 22.771311676176826 5 26.21265864124173 4.596627144321573 44.890368582910746 24.30034563152595 6 19.555623089274537 14.894813712772038 46.441854979906196 19.10770821804723 7 69.00587845744923 1.676448976259378 23.211515607848828 6.106156958442572 8 66.62546605825843 11.15478123610897 12.445683234603068 9.774069471029547 9 62.01681891992416 4.328331806264911 15.03746609454519 18.617383179265737 10 38.34627561619479 20.228969546324606 23.07158473415402 18.35317010332659 11 27.607885116072318 22.711892083133 28.737991345604314 20.94223145519037 12 23.607948617927484 17.491586004191124 34.606923516551305 24.29354186133009 13 22.577177433255013 21.591764716554934 37.82624078089138 18.004817069298667 14 18.605136392913195 25.304808904774433 30.940825342683226 25.14922935962915 15 14.455063365779758 23.51382979688478 40.26040296462946 21.770703872705997 16 16.43428011575481 23.644008599965527 29.16345377518529 30.75825750909437 17 16.7059773389094 25.2043398982156 32.79349196701532 25.29619079585968 18 16.83298104923208 22.604619306378307 34.47561075177125 26.08678889261836 19 18.039516297297542 24.63690546388105 30.205337784510988 27.118240454310417 20 19.344025836183356 25.395299048379343 37.08848529932053 18.17218981611677 21 22.738653579236708 27.170856277158386 29.475293242495443 20.615196901109467 22 17.308337793582684 23.54784864786407 31.794471709923528 27.34934184862972 23 18.226393185343774 27.237306432737928 29.986483176544226 24.549817205374072 24 23.59728937795397 21.689739007375287 27.00733900011793 27.705632614552812 25 18.54617038454909 28.25787196211661 24.52963268712636 28.66632496620794 26 21.420990084638902 22.909655003492603 28.91783767111482 26.751517240753675 27 25.207514990973667 25.06009997006341 26.073861729246232 23.658523309716692 28 18.254061850806927 26.064563243311895 31.358803625048758 24.32257128083242 29 28.140847114747853 20.126459408707014 27.202833997078912 24.52985947946622 30 24.229359629149165 24.495160251467347 31.581740495133037 19.69373962425045 31 23.856513022416152 25.758620376838152 27.212132483013253 23.17273411773244 32 27.025482387306887 29.043027042718606 24.285377337095063 19.646113232879447 33 20.273194052597677 21.642792993023868 27.945805702466593 30.138207251911858 34 24.78817595456896 22.962951203360156 30.497219525913295 21.751653316157594 35 23.79913456043109 23.021010042364807 26.118766612538895 27.06108878466521 36 25.646358168606497 24.977093973673945 25.73730189689113 23.63924596082843 37 25.51118993404879 23.58663013798046 30.967813631126795 19.934366296843958 38 20.879636769388476 29.150753404153022 26.719766313173004 23.249843513285494 39 25.147641813250114 20.74242740377201 33.2427675922818 20.86716319069607 40 22.285522484192573 22.77788865403282 33.566627053604634 21.36996180816997 41 19.302522837988626 24.408525577640088 28.335434942349387 27.953516642021896 42 20.973302005751453 23.66419311821324 29.40362686309907 25.95887801293624 43 26.015576097901715 19.721181497373745 25.47512995201074 28.788112452713797 44 23.58776409967977 18.928769061896165 30.746237515081692 26.737229323342376 45 21.212567924305787 19.44449484274219 28.483757132619086 30.859180100332935 46 26.931136773924326 21.44298894160551 29.620893924686797 22.004980359783367 47 17.193354077272684 20.354839294947976 39.939038219045116 22.512768408734228 48 20.703419121315758 22.446318253154683 29.493436629684393 27.356825995845163 49 20.64014405849428 18.90110039643301 36.96397630473633 23.494779240336378 50 23.53129280705415 17.328749104170257 30.54688704834306 28.593071040432537 51 19.995146643926955 17.850598278192557 28.497818257690525 33.65643682018996 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 122.0 1 248.0 2 374.0 3 1007.0 4 1640.0 5 1142.0 6 644.0 7 671.5 8 699.0 9 895.0 10 1091.0 11 1093.5 12 1096.0 13 1053.0 14 1010.0 15 948.0 16 886.0 17 893.0 18 900.0 19 911.5 20 923.0 21 1193.0 22 1463.0 23 1639.0 24 1815.0 25 2008.0 26 2345.0 27 2489.0 28 2891.5 29 3294.0 30 4107.0 31 4920.0 32 5473.5 33 6027.0 34 7071.5 35 8116.0 36 8765.5 37 9415.0 38 10118.0 39 10821.0 40 12159.5 41 13498.0 42 15763.0 43 18028.0 44 21644.0 45 25260.0 46 53312.5 47 81365.0 48 73037.0 49 64709.0 50 62054.5 51 59400.0 52 45956.0 53 32512.0 54 27612.5 55 22713.0 56 19348.0 57 15983.0 58 14636.0 59 13289.0 60 12218.0 61 11147.0 62 9693.0 63 8239.0 64 6911.0 65 5583.0 66 4296.0 67 3009.0 68 2786.5 69 2564.0 70 2059.0 71 1554.0 72 1257.0 73 960.0 74 748.5 75 411.0 76 285.0 77 250.0 78 215.0 79 157.5 80 100.0 81 62.5 82 25.0 83 14.0 84 3.0 85 3.5 86 4.0 87 3.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 440932.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.10599810010073 #Duplication Level Percentage of deduplicated Percentage of total 1 70.32032382949868 22.57704183268352 2 12.431288948175169 7.982378787038301 3 5.0064142017372415 4.822077745478795 4 2.4970521323754276 3.206814040715918 5 1.527817399281271 2.452605125931266 6 0.9921289850203879 1.9111974784871661 7 0.7829638893174476 1.7596486000011413 8 0.6257862262752161 1.607319311348903 9 0.5615619094666567 1.6226555038582877 >10 5.051850219007189 28.625122509115364 >50 0.11528275822787995 2.5783215782572566 >100 0.07116219643696292 4.057457944906568 >500 0.006404597679326663 1.4686265932687323 >1k 0.006404597679326663 5.15527231650835 >5k 0.0021348658931088877 4.793599028215817 >10k+ 0.0014232439287392587 5.379861604184636 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGC 12195 2.765732584616222 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCG 11352 2.574546642112616 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 8800 1.9957725907849735 No Hit GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 7046 1.5979788266671506 No Hit CCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 5135 1.1645786651910046 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAGTTACT 4233 0.9600119746355447 No Hit CTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 3808 0.863625230194225 TruSeq Adapter, Index 27 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 3337 0.7568060381192565 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAGTTACTCGTA 2547 0.5776400896283327 No Hit GAACTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCT 2267 0.5141382344669926 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCT 2154 0.48851070006259467 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTC 2018 0.4576669418413724 No Hit TGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCTT 1104 0.2503787432075694 Illumina Single End Adapter 1 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 1096 0.248564404488674 TruSeq Adapter, Index 27 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 900 0.20411310587573595 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGAGTTACTCGT 862 0.19549499696098266 No Hit TGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 752 0.17054783957617048 TruSeq Adapter, Index 27 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 742 0.16827991617755117 TruSeq Adapter, Index 27 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATG 735 0.16669236979851768 No Hit TTCCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCT 675 0.15308482940680196 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTAT 659 0.1494561519690111 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGAGTTAC 574 0.13017880308074714 No Hit TTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTG 529 0.11997314778696036 TruSeq Adapter, Index 27 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCC 479 0.10863353079386391 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 468 0.1061388150553827 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.971805176308365 0.0 2 0.0 0.0 0.0 4.8959930329393195 0.0 3 0.0 0.0 0.0 6.104115827383814 0.0 4 0.0 0.0 0.0 8.1343608538278 0.0 5 0.0 0.0 0.0 12.308927453666325 0.0 6 0.0 0.0 0.0 13.488020828608493 0.0 7 0.0 0.0 0.0 15.098019649288325 0.0 8 0.0 0.0 0.0 17.065443197590557 0.0 9 0.0 0.0 0.0 17.743098709098003 0.0 10 0.0 0.0 0.0 21.782270282038954 0.0 11 0.0 0.0 0.0 24.29104714559161 0.0 12 0.0 0.0 0.0 29.30247747952065 0.0 13 0.0 0.0 0.0 30.279045294966117 0.0 14 0.0 0.0 0.0 30.69180735351483 0.0 15 0.0 0.0 0.0 31.761813612983406 0.0 16 0.0 0.0 0.0 32.85971533025501 0.0 17 0.0 0.0 0.0 34.25720972848421 0.0 18 0.0 0.0 0.0 35.56874982990575 0.0 19 0.0 0.0 0.0 37.568831475148095 0.0 20 0.0 0.0 0.0 38.66446526902107 0.0 21 0.0 0.0 0.0 39.91726615441837 0.0 22 0.0 0.0 0.0 41.26985566935491 0.0 23 0.0 0.0 0.0 42.44350602814039 0.0 24 0.0 0.0 0.0 43.37222065987499 0.0 25 0.0 0.0 0.0 44.228815327533496 0.0 26 0.0 0.0 0.0 44.986755327352064 0.0 27 2.2679233986192882E-4 0.0 0.0 45.753313436085385 0.0 28 2.2679233986192882E-4 0.0 0.0 46.50785155080602 0.0 29 2.2679233986192882E-4 0.0 0.0 47.32362359728938 0.0 30 2.2679233986192882E-4 0.0 0.0 48.15844620032114 0.0 31 2.2679233986192882E-4 0.0 0.0 48.91230393802219 0.0 32 2.2679233986192882E-4 0.0 0.0 49.631689240064226 0.0 33 2.2679233986192882E-4 0.0 0.0 50.29936588861774 0.0 34 2.2679233986192882E-4 0.0 0.0 50.98722705541898 0.0 35 2.2679233986192882E-4 0.0 0.0 51.66851124436421 0.0 36 2.2679233986192882E-4 0.0 0.0 52.335734308238 0.0 37 4.5358467972385764E-4 0.0 0.0 53.029265283535786 0.0 38 4.5358467972385764E-4 0.0 0.0 53.7350430451861 0.0 39 4.5358467972385764E-4 0.0 0.0 54.51452831729156 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTAGC 20 7.02855E-4 45.000004 43 TATGCGA 20 7.02855E-4 45.000004 31 ACGGGTT 40 6.7993824E-9 45.000004 20 ACGGGTA 20 7.02855E-4 45.000004 5 ACGGGAA 20 7.02855E-4 45.000004 5 CCGTAGG 20 7.02855E-4 45.000004 2 TCGCTAG 20 7.02855E-4 45.000004 1 TCCGTTC 20 7.02855E-4 45.000004 16 CTCGATC 20 7.02855E-4 45.000004 16 TTCGGAC 20 7.02855E-4 45.000004 13 ATACGGG 20 7.02855E-4 45.000004 25 ATACGAG 20 7.02855E-4 45.000004 18 TATACGA 20 7.02855E-4 45.000004 17 TACAAGT 20 7.02855E-4 45.000004 32 CGGACGA 20 7.02855E-4 45.000004 10 CGCGACC 25 3.8868806E-5 45.0 10 CCCGGTC 25 3.8868806E-5 45.0 38 AAGTGAT 25 3.8868806E-5 45.0 12 GCATCAC 35 1.2096461E-7 45.0 39 TACGGGA 30 2.1624473E-6 44.999996 4 >>END_MODULE