##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933769.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 363482 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.086436192163575 31.0 16.0 33.0 16.0 34.0 2 28.38448671461035 31.0 26.0 33.0 16.0 34.0 3 29.301726082722116 31.0 28.0 34.0 16.0 34.0 4 32.66044260788705 35.0 32.0 37.0 28.0 37.0 5 33.82898740515349 35.0 33.0 37.0 28.0 37.0 6 33.01324412212984 35.0 33.0 37.0 26.0 37.0 7 33.48216417869386 35.0 32.0 35.0 29.0 37.0 8 33.6256238273147 35.0 35.0 37.0 28.0 37.0 9 34.73643811798108 37.0 33.0 39.0 28.0 39.0 10 33.445174726671475 35.0 31.0 38.0 27.0 39.0 11 33.93276695957434 35.0 32.0 39.0 27.0 39.0 12 34.140799269289815 37.0 32.0 39.0 26.0 39.0 13 34.49604106943397 37.0 33.0 39.0 27.0 39.0 14 34.246372585162405 37.0 32.0 39.0 25.0 40.0 15 34.79278203597427 37.0 32.0 39.0 27.0 40.0 16 34.385350581321774 36.0 32.0 39.0 27.0 40.0 17 34.37234305962881 36.0 32.0 38.0 27.0 40.0 18 34.297139885881556 36.0 32.0 39.0 27.0 40.0 19 34.11903753143209 36.0 32.0 39.0 25.0 40.0 20 35.08770448055199 37.0 33.0 39.0 27.0 40.0 21 34.40034444621742 37.0 32.0 39.0 25.0 40.0 22 35.3734545314486 37.0 34.0 39.0 28.0 40.0 23 36.165999966985986 38.0 34.0 39.0 30.0 40.0 24 36.2736779262797 38.0 35.0 40.0 31.0 40.0 25 34.198480254868194 37.0 32.0 39.0 24.0 40.0 26 34.778525484067984 37.0 33.0 39.0 27.0 40.0 27 35.51714802933846 37.0 34.0 39.0 30.0 40.0 28 35.631992780935505 38.0 34.0 40.0 29.0 40.0 29 36.20735552241927 38.0 35.0 40.0 30.0 41.0 30 34.0640581927028 37.0 32.0 39.0 24.0 40.0 31 34.55201908210035 37.0 32.0 39.0 25.0 40.0 32 35.197308257355246 37.0 34.0 39.0 29.0 40.0 33 36.06758243874525 38.0 35.0 40.0 30.0 40.0 34 36.29615496778383 38.0 35.0 40.0 30.0 41.0 35 36.51069654068152 38.0 35.0 40.0 31.0 41.0 36 36.43721559802136 38.0 35.0 40.0 31.0 41.0 37 36.713174242465925 38.0 35.0 40.0 31.0 41.0 38 36.158470020523716 38.0 35.0 40.0 30.0 41.0 39 36.12315602973462 38.0 35.0 40.0 30.0 41.0 40 35.61769496151116 38.0 34.0 40.0 29.0 41.0 41 35.145176377372195 37.0 33.0 39.0 28.0 41.0 42 36.06825097253784 38.0 35.0 40.0 31.0 41.0 43 36.220610649220596 38.0 35.0 40.0 31.0 41.0 44 36.66378252568215 38.0 35.0 40.0 32.0 41.0 45 36.90284525781194 39.0 35.0 40.0 33.0 41.0 46 36.68896946753897 39.0 35.0 40.0 32.0 41.0 47 36.57041889282 38.0 35.0 40.0 31.0 41.0 48 36.63651570091504 38.0 35.0 40.0 32.0 41.0 49 36.84855095988247 39.0 35.0 40.0 32.0 41.0 50 36.709019978981075 39.0 35.0 40.0 32.0 41.0 51 35.98760323757435 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 11.0 11 7.0 12 11.0 13 11.0 14 15.0 15 34.0 16 49.0 17 111.0 18 200.0 19 359.0 20 643.0 21 753.0 22 1035.0 23 1293.0 24 1754.0 25 2369.0 26 3363.0 27 4462.0 28 5957.0 29 8326.0 30 11642.0 31 16564.0 32 23461.0 33 30263.0 34 37468.0 35 48712.0 36 59705.0 37 63037.0 38 37980.0 39 3882.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.38642353679137 3.7121508080180035 47.782283579379445 17.11914207581118 2 18.569557777276454 14.393284949461046 46.77920777369994 20.257949499562564 3 18.30599589525754 14.403739387369937 47.28624801228121 20.004016705091313 4 17.917255875118986 3.93967239092995 54.86021316048662 23.282858573464434 5 24.731348457420175 4.6582774387727595 46.13130774013568 24.47906636367138 6 20.075822186518177 14.049388965615902 48.24145349700948 17.633335350856438 7 73.32550167546124 1.6889419558602625 19.879113683758757 5.106442684919749 8 71.99641247709653 9.75536615293192 10.360072850925217 7.888148519046336 9 67.1419767691385 4.250554360325958 12.391810323482318 16.215658547053224 10 39.09464567708992 22.559301423454254 20.39715859382308 17.94889430563274 11 29.96406974760786 23.447928645710103 26.086848867344187 20.50115273933785 12 25.263149206838303 18.680429842468126 32.14134400052823 23.915076950165346 13 23.590989374989682 22.06986865924585 35.653209787554815 18.68593217820965 14 20.47281571026901 26.20679978650937 29.45510369151705 23.86528081170457 15 15.855530672770591 23.587412856757695 39.362884544489134 21.19417192598258 16 17.239368111763444 23.514506908182522 30.211674855976362 29.034450124077672 17 17.551625665094832 24.762161537572698 32.04312730754205 25.64308548979042 18 17.42011984087245 23.143924595991 33.70950968686207 25.72644587627448 19 20.29509026581784 24.918152755844854 29.979476287684122 24.807280690653183 20 21.766689959887973 24.96162120820288 34.319718720596896 18.951970111312253 21 24.23338707281241 27.357063073274606 28.269900572793148 20.139649281119834 22 19.893419756686715 23.2924876610121 29.77203823022873 27.042054352072455 23 20.030703033437693 27.52323361266858 27.754331713812512 24.691731640081212 24 22.764538546613036 21.9345112000044 27.976350960982938 27.324599292399625 25 18.22291062556055 28.228357937944658 25.852724481542417 27.69600695495238 26 18.35606715050539 23.52386087894311 31.070039231653833 27.050032738897663 27 19.91515398286573 26.35371215080802 27.54414248848636 26.18699137783989 28 15.616729301588524 26.107757743161976 34.08889573624003 24.18661721900947 29 19.767966501780005 20.829642183106728 32.98402671934236 26.418364595770903 30 21.08357497757798 25.550921366119915 28.35216049212891 25.01334316417319 31 21.391155545529077 26.424142048299505 25.43344649803842 26.751255908133004 32 22.010168316450333 29.114233992329748 26.92567995113926 21.949917740080664 33 21.519635085093622 22.524911825069744 24.397081561122697 31.55837152871394 34 20.68465563631762 23.675725345409127 29.355511414595497 26.284107603677757 35 17.533192840360734 23.747255710048915 27.44565067871311 31.27390077087724 36 20.19577310568336 25.46150841032018 27.82118509307201 26.521533390924446 37 16.88941955860263 25.02407271886916 31.83211273185467 26.25439499067354 38 21.334756604178473 28.830313468067192 25.04690741219648 24.788022515557852 39 21.16886118157158 22.233563147556136 31.590009959227693 25.00756571164459 40 23.854276140221526 23.431421638485535 28.28640758001772 24.427894641275223 41 17.735403678861676 25.12449034615194 25.07854584271023 32.06156013227615 42 18.168162384932405 24.687329771488 29.61081979300213 27.53368805057747 43 21.105859437331148 21.63518413566559 27.11881193566669 30.140144491336574 44 20.434849593652505 20.518485096923644 30.11400839656434 28.93265691285951 45 19.326128941735767 21.03405395590428 28.26192218596794 31.37789491639201 46 23.832817030829588 22.91942929773689 29.176410386208946 24.07134328522458 47 16.398336093671766 21.417566757088384 36.86097248281895 25.32312466642089 48 18.809459615606823 23.123841070534443 29.012165664324506 29.054533649534225 49 18.86008110442883 20.41916793678917 35.30793821977429 25.412812739007705 50 21.76531437595259 18.822114987812327 29.884285879355787 29.528284756879298 51 18.775345134009385 19.81803775702786 27.396129657039413 34.010487451923346 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 52.0 1 193.5 2 335.0 3 835.5 4 1336.0 5 972.5 6 609.0 7 636.5 8 664.0 9 680.5 10 697.0 11 705.0 12 713.0 13 673.5 14 634.0 15 643.0 16 652.0 17 697.5 18 743.0 19 755.0 20 767.0 21 876.0 22 985.0 23 1018.0 24 1051.0 25 1272.5 26 1892.5 27 2291.0 28 2556.0 29 2821.0 30 3344.5 31 3868.0 32 4768.0 33 5668.0 34 6433.5 35 7199.0 36 7782.0 37 8365.0 38 9592.0 39 10819.0 40 11920.0 41 13021.0 42 15684.5 43 18348.0 44 21108.0 45 23868.0 46 43582.5 47 63297.0 48 55597.0 49 47897.0 50 45076.0 51 42255.0 52 33882.5 53 25510.0 54 22100.0 55 18690.0 56 16545.0 57 14400.0 58 13153.5 59 11907.0 60 10897.5 61 9888.0 62 8397.5 63 6907.0 64 6275.5 65 5644.0 66 4705.0 67 3766.0 68 3080.5 69 2395.0 70 1993.0 71 1591.0 72 1342.0 73 1093.0 74 892.0 75 472.5 76 254.0 77 193.0 78 132.0 79 109.0 80 86.0 81 69.5 82 53.0 83 28.5 84 4.0 85 8.5 86 13.0 87 11.0 88 9.0 89 4.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 363482.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.2606464521493 #Duplication Level Percentage of deduplicated Percentage of total 1 71.56541232997692 23.08746465379672 2 11.881152621375492 7.665873283244433 3 4.550678124633676 4.404234542890105 4 2.3135767793722892 2.985499300769266 5 1.387786235873568 2.2385440553338127 6 0.8767123032886107 1.696998339398602 7 0.7027115872820635 1.5868951052594713 8 0.5450255498179598 1.4066301256052391 9 0.4670416039201142 1.3560357656260396 >10 5.536797600845622 35.20273070430965 >50 0.11226133432373282 2.4903497662225362 >100 0.04541870777983084 2.6559491789631333 >500 0.005141740503377077 1.0638172624804971 >1k 0.007712610755065614 5.679866335151199 >5k 0.0025708702516885383 6.479111580949307 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGC 9392 2.5838968642188607 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCG 7472 2.0556726330327226 No Hit GAATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 6572 1.8080675246642202 No Hit GCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 4062 1.1175243891031743 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCATGCACT 3083 0.8481850545556588 No Hit CCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 2693 0.7408895075959745 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCT 2340 0.6437732817581063 TruSeq Adapter, Index 16 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCT 1943 0.5345519172888892 No Hit TCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 1856 0.5106167568132672 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCATGCACTCGTA 1839 0.5059397714329733 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTC 1395 0.3837879179711788 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCT 1334 0.3670057939595358 No Hit TGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCTT 802 0.22064366323504328 TruSeq Adapter, Index 13 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 706 0.19423245167573636 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCATGCACTCGT 644 0.1771752108770173 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATG 584 0.16066820365245046 No Hit CGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 582 0.16011797007829823 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTT 530 0.14581189715034032 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTAT 464 0.1276541892033168 No Hit TGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 459 0.12627860526793622 No Hit TCCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTG 452 0.12435278775840344 No Hit TTCCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCT 378 0.10399414551477103 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7208059821394182 0.0 2 0.0 0.0 0.0 3.294798642023539 0.0 3 0.0 0.0 0.0 4.130603441160773 0.0 4 0.0 0.0 0.0 5.751041317039083 0.0 5 0.0 0.0 0.0 9.188625571555125 0.0 6 0.0 0.0 0.0 10.182347406474047 0.0 7 0.0 0.0 0.0 11.420648065103636 0.0 8 0.0 0.0 0.0 13.050990145316687 0.0 9 0.0 0.0 0.0 13.61360397488734 0.0 10 0.0 0.0 0.0 16.89052002575093 0.0 11 0.0 0.0 0.0 19.018273256997595 0.0 12 0.0 0.0 0.0 23.597041944305357 0.0 13 0.0 0.0 0.0 24.46145888929851 0.0 14 0.0 0.0 0.0 24.807280690653183 0.0 15 0.0 0.0 0.0 25.66812111741434 0.0 16 0.0 0.0 0.0 26.602142609537747 0.0 17 0.0 0.0 0.0 27.74250169196824 0.0 18 0.0 0.0 0.0 28.93678366466565 0.0 19 0.0 0.0 0.0 30.660940569271656 0.0 20 0.0 0.0 0.0 31.609543251110097 0.0 21 0.0 0.0 0.0 32.74082347956708 0.0 22 0.0 0.0 0.0 33.96041619667549 0.0 23 0.0 0.0 0.0 35.06005799461872 0.0 24 0.0 0.0 0.0 35.91154445061929 0.0 25 0.0 0.0 0.0 36.679945636922874 0.0 26 0.0 0.0 0.0 37.349579896666135 0.0 27 0.0 0.0 0.0 37.99417852878547 0.0 28 0.0 0.0 0.0 38.631624124440826 0.0 29 0.0 0.0 0.0 39.331796347549535 0.0 30 0.0 0.0 0.0 40.10239846814973 0.0 31 0.0 0.0 0.0 40.78798950154341 0.0 32 0.0 0.0 0.0 41.473305418150005 0.0 33 0.0 0.0 0.0 42.126157553881626 0.0 34 0.0 0.0 0.0 42.784512025354765 0.0 35 0.0 0.0 0.0 43.46762700766475 0.0 36 0.0 0.0 0.0 44.123230311267136 0.0 37 0.0 0.0 0.0 44.7455444836333 0.0 38 0.0 0.0 0.0 45.38354031286281 0.0 39 0.0 0.0 0.0 46.029514528917524 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGG 35 1.208864E-7 45.000004 2 CTACCTT 35 1.208864E-7 45.000004 17 CGGGTCA 25 3.885525E-5 45.0 6 ACCGGTG 20 7.026914E-4 45.0 17 GTTAGGT 20 7.026914E-4 45.0 39 AGGGTGT 20 7.026914E-4 45.0 6 TCGGCGT 25 3.885525E-5 45.0 4 AACGGAA 40 6.7921064E-9 45.0 13 AGACGGT 25 3.885525E-5 45.0 34 CGTACCA 20 7.026914E-4 45.0 21 CGTACAT 20 7.026914E-4 45.0 35 TCGTACC 20 7.026914E-4 45.0 20 TCGTACA 20 7.026914E-4 45.0 34 TGCTACG 50 2.1827873E-11 45.0 4 GCGGATG 20 7.026914E-4 45.0 24 CCAACGG 20 7.026914E-4 45.0 2 CGGTAGT 20 7.026914E-4 45.0 12 CGGTAGG 20 7.026914E-4 45.0 31 TAAGCGT 20 7.026914E-4 45.0 21 GCCAACG 20 7.026914E-4 45.0 1 >>END_MODULE