##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933768.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 267049 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.34557328430363 30.0 16.0 33.0 16.0 34.0 2 27.416343068126075 31.0 25.0 33.0 16.0 34.0 3 28.228931769076087 31.0 25.0 34.0 16.0 34.0 4 32.08702148294882 35.0 28.0 35.0 19.0 37.0 5 33.72990350085565 35.0 33.0 37.0 28.0 37.0 6 32.57289860662276 35.0 32.0 37.0 25.0 37.0 7 33.576253796119815 35.0 32.0 35.0 30.0 37.0 8 33.20244973768859 35.0 33.0 37.0 28.0 37.0 9 34.748720272309576 37.0 32.0 39.0 29.0 39.0 10 34.03931862691866 35.0 32.0 39.0 27.0 39.0 11 34.46554003197915 37.0 32.0 39.0 27.0 39.0 12 34.40579444221847 37.0 33.0 39.0 27.0 39.0 13 34.806690906912216 37.0 34.0 39.0 29.0 39.0 14 34.37063610049092 37.0 32.0 39.0 25.0 40.0 15 35.075502997577225 37.0 33.0 39.0 27.0 40.0 16 34.458252979790224 36.0 32.0 39.0 27.0 40.0 17 34.42933693816491 36.0 32.0 38.0 27.0 40.0 18 34.36780141472164 36.0 32.0 39.0 27.0 40.0 19 34.00480810637748 36.0 32.0 39.0 27.0 40.0 20 34.958644293743845 37.0 33.0 39.0 27.0 40.0 21 34.3897674209602 37.0 32.0 39.0 26.0 40.0 22 35.56863347175987 37.0 34.0 39.0 30.0 40.0 23 36.277795460758135 38.0 34.0 39.0 31.0 40.0 24 36.423558972323434 38.0 35.0 40.0 31.0 40.0 25 34.28664027949927 37.0 32.0 39.0 25.0 40.0 26 35.02492800946643 37.0 33.0 39.0 27.0 40.0 27 35.69561016892031 37.0 34.0 39.0 30.0 40.0 28 35.90504738830702 38.0 34.0 40.0 30.0 40.0 29 36.42273889810484 38.0 35.0 40.0 30.0 41.0 30 33.998801718036766 37.0 32.0 39.0 24.0 40.0 31 34.75257724237874 37.0 33.0 39.0 26.0 40.0 32 35.352085197847586 37.0 34.0 39.0 30.0 40.0 33 36.00760160120427 38.0 35.0 39.0 30.0 40.0 34 36.35004437387895 38.0 35.0 40.0 31.0 40.0 35 36.50746866679898 38.0 35.0 40.0 31.0 41.0 36 36.49988953338151 38.0 35.0 40.0 31.0 41.0 37 36.68816584222371 38.0 35.0 40.0 31.0 41.0 38 36.04505914644878 38.0 35.0 40.0 30.0 41.0 39 36.23658205048512 38.0 35.0 40.0 31.0 41.0 40 35.813150395620276 38.0 34.0 40.0 30.0 41.0 41 35.3575898056162 37.0 34.0 39.0 29.0 40.0 42 36.22769229617037 38.0 35.0 40.0 31.0 41.0 43 36.35420465907006 38.0 35.0 40.0 31.0 40.0 44 36.82041872465353 39.0 35.0 40.0 32.0 41.0 45 37.0906987107235 39.0 35.0 40.0 33.0 41.0 46 36.89387715363098 39.0 35.0 40.0 32.0 41.0 47 36.63691307587746 38.0 35.0 40.0 31.0 41.0 48 36.7967489112485 38.0 35.0 40.0 32.0 41.0 49 36.96781115076259 39.0 35.0 40.0 33.0 41.0 50 36.7791940804871 39.0 35.0 40.0 32.0 41.0 51 36.08196623091642 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 3.0 11 10.0 12 5.0 13 8.0 14 9.0 15 11.0 16 24.0 17 51.0 18 86.0 19 152.0 20 286.0 21 450.0 22 571.0 23 756.0 24 1033.0 25 1576.0 26 2166.0 27 2961.0 28 4050.0 29 5685.0 30 8447.0 31 12241.0 32 17492.0 33 23630.0 34 29853.0 35 38705.0 36 45642.0 37 44417.0 38 24566.0 39 2158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.68240659953791 4.080150084815895 43.015326775236005 16.222116540410187 2 16.911877595497455 22.0079461072687 40.410186894539954 20.669989402693886 3 16.81339379664406 22.240487700759036 44.28737797183289 16.658740530764014 4 18.120270062797463 3.0657295103145863 57.023242925455634 21.79075750143232 5 28.655040835202527 3.3810274518908514 43.675505244355904 24.288426468550718 6 17.07739029166932 18.821265011290063 45.08386101427079 19.01748368276983 7 64.19833064343997 1.2072690779594755 28.66964489662946 5.9247553819710985 8 59.42280255683414 13.868615871993528 14.546768570561957 12.161813000610374 9 55.50516946328202 3.762230901445053 17.00998693123734 23.72261270403559 10 34.75055139693464 22.72317065407472 24.296290193934446 18.229987755056186 11 29.002542604540736 22.772974248171685 27.86080457144569 20.363678575841888 12 22.552041011200192 16.25207358949107 34.50677591003898 26.689109489269757 13 19.941658646914988 23.86827885519137 39.849990076727494 16.340072421166152 14 18.076457878516678 29.203629296496146 26.917906451624983 25.80200637336219 15 11.457447884096176 25.447764267980784 43.107819164273224 19.986968683649817 16 12.219105856977558 26.217285966245896 28.532216933970922 33.03139124280563 17 13.802710364015592 26.777108320944848 32.938898853768414 26.481282461271157 18 12.798025830465571 23.908346408337046 35.56762991061566 27.72599785058173 19 15.147407404633606 26.418372658201307 30.021082273290666 28.413137663874423 20 18.486494987811223 25.541005583245024 38.88986665368528 17.082632775258475 21 20.937356065740744 30.846024512355406 28.630700732824316 19.58591868907953 22 14.530292193567472 24.4546880909496 31.586338087766663 29.428681627716262 23 16.587592539196926 29.874292732794355 28.212799898146034 25.325314829862684 24 22.50410973267078 21.414796535467275 26.67375650161581 29.407337230246135 25 13.993686551906205 32.20270437260578 23.882508453504787 29.921100621983232 26 14.508947796097345 23.48782433186419 33.365412340057446 28.63781553198102 27 18.382019779141658 31.46913113323772 24.942613527854437 25.20623555976618 28 11.361959790150872 24.134896592011206 34.1772483701493 30.325895247688628 29 17.219311811689987 21.470966002493924 30.135667986025037 31.17405419979105 30 16.465892027305852 33.97840845687495 27.219723721114853 22.335975794704343 31 22.556160105448814 23.672060183711604 21.945410767312364 31.826368943527218 32 18.388385652071342 31.647001112155447 25.63349797228224 24.33111526349097 33 16.456530449468076 31.873925758943116 21.29721511782482 30.37232867376399 34 23.870151170758923 21.98472939423102 30.38580934585039 23.75931008915967 35 13.749162138783518 27.004781893959535 29.24819040700396 29.99786556025299 36 18.3835176315957 29.40920954581369 28.50525558979813 23.702017232792482 37 15.615111833408852 27.19276237694206 32.45396912177166 24.73815666787743 38 16.141981434118833 29.31259806252785 22.996528726937754 31.548891776415566 39 23.119352628169363 24.428101209890322 27.449644072810607 25.00290208912971 40 21.072162786604707 26.198937273683853 32.06939550419586 20.65950443551558 41 21.66231665349805 28.23077412759456 24.889439765735876 25.217469453171514 42 18.139742144700037 20.40973753880374 36.28959479346487 25.160925523031352 43 22.156982426446085 26.14052102797614 25.421551850035012 26.280944695542765 44 18.471142000157275 21.810978509561917 30.39929001793678 29.318589472344026 45 17.59939187190366 17.89896236271246 27.98662417758539 36.51502158779849 46 25.51404423907223 23.33541784466521 28.680129863807764 22.470408052454793 47 12.748222236368607 21.493059326191073 42.12260671262577 23.636111724814548 48 18.84335833498721 23.51740691783156 27.701657748203512 29.937576998977715 49 17.334646450651377 17.41852618807784 41.10369258076233 24.143134780508447 50 22.8415009979442 18.179435234732203 30.695864803837498 28.2831989634861 51 17.619987343146764 17.024965455777778 27.03548786926744 38.31955933180802 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 67.0 1 124.0 2 181.0 3 535.5 4 890.0 5 624.0 6 358.0 7 402.5 8 447.0 9 493.0 10 539.0 11 640.0 12 741.0 13 841.0 14 941.0 15 884.5 16 828.0 17 741.5 18 655.0 19 581.0 20 507.0 21 626.5 22 746.0 23 725.5 24 705.0 25 882.0 26 1321.5 27 1584.0 28 1704.0 29 1824.0 30 2309.0 31 2794.0 32 3116.5 33 3439.0 34 3691.5 35 3944.0 36 4318.0 37 4692.0 38 5567.0 39 6442.0 40 8226.5 41 10011.0 42 12795.0 43 15579.0 44 39648.5 45 63718.0 46 53238.0 47 42758.0 48 41155.0 49 39552.0 50 29734.0 51 19916.0 52 16048.0 53 12180.0 54 10165.0 55 8150.0 56 6923.0 57 5696.0 58 5124.0 59 4552.0 60 4095.5 61 3639.0 62 3494.5 63 3350.0 64 2600.5 65 1851.0 66 1456.5 67 1062.0 68 830.5 69 599.0 70 504.5 71 410.0 72 304.0 73 198.0 74 217.5 75 177.5 76 118.0 77 89.5 78 61.0 79 36.0 80 11.0 81 12.0 82 13.0 83 8.5 84 4.0 85 2.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 267049.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.59269647143408 #Duplication Level Percentage of deduplicated Percentage of total 1 69.02451061029775 20.426213915798225 2 12.903184987409366 7.636800736943407 3 5.43105520897921 4.821587049567682 4 2.8015741455451932 3.3162453332534483 5 1.750034798233515 2.58941242992859 6 1.1869361104432663 2.107478402839928 7 0.8554038493173219 1.7719594531340692 8 0.7022916218507599 1.662616223988856 9 0.6390221063687095 1.7019348509075112 >10 4.446581548078505 22.92463180914364 >50 0.145519885608716 2.9679946376882147 >100 0.0873119313652296 4.567701058607222 >500 0.011388512786769079 2.3508794266220807 >1k 0.01012312247712807 8.366629345176353 >5k 0.003796170928923027 8.589809360828912 >10k+ 0.0012653903096410087 4.1981059655718616 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGC 11211 4.1981059655718616 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCG 9069 3.396005976431292 No Hit GAATCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC 8647 3.237982542529648 No Hit GCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 5223 1.9558208418679717 TruSeq Adapter, Index 21 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 4366 1.6349059535890418 TruSeq Adapter, Index 21 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACCAGTAT 3514 1.3158633808776667 No Hit CTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGCT 3011 1.1275084347816318 TruSeq Adapter, Index 15 (95% over 24bp) GAACTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT 2710 1.0147950376148196 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTC 2416 0.9047028822425847 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACCAGTATCGTA 2283 0.8548992881456212 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCT 2023 0.7575388786327603 No Hit TCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 2020 0.7564154892922272 TruSeq Adapter, Index 21 (95% over 21bp) TGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGCTT 930 0.34825069556523336 TruSeq Adapter, Index 21 (95% over 23bp) AGGCCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC 806 0.30181726948986887 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACCAGTATCGT 802 0.3003194170358249 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATG 755 0.28271965070080773 No Hit CGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG 706 0.26437095813876854 TruSeq Adapter, Index 15 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG 589 0.22055877385798112 TruSeq Adapter, Index 15 (95% over 22bp) GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTAT 579 0.21681414272287108 No Hit TGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG 559 0.20932488045265102 TruSeq Adapter, Index 15 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 552 0.206703638658074 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTT 447 0.1673850117394186 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTACCAGTA 430 0.16101913880973157 No Hit TTCCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT 395 0.14791292983684642 No Hit ACTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTGC 375 0.14042366756662636 TruSeq Adapter, Index 15 (95% over 23bp) TTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCTG 343 0.12844084793427424 TruSeq Adapter, Index 15 (95% over 22bp) TGCCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT 341 0.12769192170725224 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCC 316 0.11833034386947713 No Hit CGTTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTC 280 0.10484967178308101 No Hit CGTCTGTCTCTTATACACATCTGACGCTACCAGTATCGTATGCCGTCTTCT 276 0.103351819329037 TruSeq Adapter, Index 15 (95% over 21bp) GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCTACCAGTATCG 274 0.10260289310201498 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.2772936801860333 0.0 2 0.0 0.0 0.0 6.277874098011975 0.0 3 0.0 0.0 0.0 7.63043486401372 0.0 4 0.0 0.0 0.0 10.39509603106546 0.0 5 0.0 0.0 0.0 16.468138805986918 0.0 6 0.0 0.0 0.0 17.960748776441775 0.0 7 0.0 0.0 0.0 19.922561028125923 0.0 8 0.0 0.0 0.0 22.64116323221581 0.0 9 0.0 0.0 0.0 23.33953693891383 0.0 10 0.0 0.0 0.0 28.348355545237016 0.0 11 0.0 0.0 0.0 31.179671146493714 0.0 12 0.0 0.0 0.0 38.10761320956079 0.0 13 0.0 0.0 0.0 39.27556366060161 0.0 14 0.0 0.0 0.0 39.77322513845774 0.0 15 0.0 0.0 0.0 41.17633842478347 0.0 16 0.0 0.0 0.0 42.43902804354257 0.0 17 0.0 0.0 0.0 43.86011555931683 0.0 18 0.0 0.0 0.0 45.4178821115226 0.0 19 0.0 0.0 0.0 47.9020704065546 0.0 20 0.0 0.0 0.0 49.1340540500058 0.0 21 0.0 0.0 0.0 50.56937116409348 0.0 22 0.0 0.0 0.0 51.854154106549736 0.0 23 0.0 0.0 0.0 53.096622717179244 0.0 24 0.0 0.0 0.0 54.010687177259605 0.0 25 0.0 0.0 0.0 54.81728072376231 0.0 26 0.0 0.0 0.0 55.62200195469745 0.0 27 0.0 0.0 0.0 56.29715894835779 0.0 28 0.0 0.0 0.0 56.982426446082926 0.0 29 0.0 0.0 0.0 57.72274002149418 0.0 30 0.0 0.0 0.0 58.51173380166187 0.0 31 0.0 0.0 0.0 59.26178341802441 0.0 32 0.0 0.0 0.0 59.95042108377114 0.0 33 0.0 0.0 0.0 60.62932270856659 0.0 34 0.0 0.0 0.0 61.20974053450865 0.0 35 0.0 0.0 0.0 61.872540245423124 0.0 36 0.0 0.0 0.0 62.50575737037023 0.0 37 0.0 0.0 0.0 63.16968047062524 0.0 38 0.0 0.0 0.0 63.752345075248364 0.0 39 0.0 0.0 0.0 64.48704170395695 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATCA 25 3.882736E-5 45.000004 32 GTTTGCG 25 3.882736E-5 45.000004 1 AAGTACG 25 3.882736E-5 45.000004 15 CAACGGA 25 3.882736E-5 45.000004 37 GGCACGT 50 2.1827873E-11 45.000004 11 ATAATCC 35 1.2072451E-7 45.000004 18 GATCCGG 50 2.1827873E-11 45.000004 5 CCATGGG 25 3.882736E-5 45.000004 3 ATACTCG 25 3.882736E-5 45.000004 10 ATCCGGC 50 2.1827873E-11 45.000004 6 GACCAAG 25 3.882736E-5 45.000004 42 TCTCGCG 25 3.882736E-5 45.000004 1 GCGATTT 25 3.882736E-5 45.000004 9 CTCGCGG 25 3.882736E-5 45.000004 2 GCGATCC 25 3.882736E-5 45.000004 9 ACTCGAC 25 3.882736E-5 45.000004 11 TCGTAGG 25 3.882736E-5 45.000004 2 CTCGACA 25 3.882736E-5 45.000004 12 CCGAAGG 25 3.882736E-5 45.000004 15 AACTCGA 25 3.882736E-5 45.000004 10 >>END_MODULE