##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933766.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 657633 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.746007271532907 31.0 25.0 33.0 16.0 34.0 2 28.677152758453424 31.0 28.0 34.0 16.0 34.0 3 29.466380184692678 31.0 30.0 34.0 16.0 34.0 4 32.834652458133945 35.0 32.0 37.0 28.0 37.0 5 33.89384656791858 35.0 33.0 37.0 28.0 37.0 6 33.22730763206834 35.0 33.0 37.0 28.0 37.0 7 33.60348857189344 35.0 32.0 36.0 29.0 37.0 8 33.70638334755099 35.0 35.0 37.0 28.0 37.0 9 34.77469196345074 37.0 33.0 39.0 28.0 39.0 10 33.6894118756206 35.0 32.0 39.0 27.0 39.0 11 34.23679164518812 37.0 32.0 39.0 27.0 39.0 12 34.43028254360715 37.0 33.0 39.0 27.0 39.0 13 34.824963163344904 37.0 34.0 39.0 30.0 39.0 14 34.641158518505 37.0 33.0 39.0 27.0 40.0 15 35.022707193829994 37.0 33.0 39.0 27.0 40.0 16 34.55926937973003 36.0 32.0 39.0 27.0 40.0 17 34.48329235302973 36.0 32.0 39.0 27.0 40.0 18 34.401578083824866 37.0 32.0 39.0 27.0 40.0 19 34.175724150095874 36.0 32.0 39.0 25.0 40.0 20 35.20072289559678 37.0 33.0 39.0 28.0 40.0 21 34.55955525346204 37.0 32.0 39.0 25.0 40.0 22 35.43762706555176 37.0 34.0 39.0 28.0 40.0 23 36.24429887186318 38.0 34.0 39.0 30.0 40.0 24 36.34694883012258 38.0 35.0 40.0 31.0 40.0 25 34.336303074815284 37.0 32.0 39.0 25.0 40.0 26 34.943590117892505 37.0 33.0 39.0 27.0 40.0 27 35.6097549849232 37.0 34.0 39.0 30.0 40.0 28 35.80570470155847 38.0 34.0 40.0 30.0 40.0 29 36.27970007587819 38.0 35.0 40.0 30.0 41.0 30 34.31191865371719 37.0 33.0 39.0 24.0 40.0 31 34.50257362389053 37.0 32.0 39.0 25.0 40.0 32 35.293590802164736 37.0 34.0 39.0 30.0 40.0 33 36.10256784559169 38.0 35.0 40.0 30.0 40.0 34 36.33719262871541 38.0 35.0 40.0 30.0 41.0 35 36.53369280434528 38.0 35.0 40.0 31.0 41.0 36 36.34419957635946 38.0 35.0 40.0 30.0 41.0 37 36.626399526787736 39.0 35.0 40.0 31.0 41.0 38 35.93477669155897 38.0 35.0 40.0 30.0 41.0 39 36.00373916759043 38.0 35.0 40.0 30.0 41.0 40 35.48427922564713 38.0 34.0 40.0 29.0 41.0 41 35.03461657185695 37.0 33.0 40.0 27.0 41.0 42 35.905736178081085 38.0 35.0 40.0 30.0 41.0 43 36.01428456297053 38.0 35.0 40.0 30.0 41.0 44 36.43734271242471 38.0 35.0 40.0 31.0 41.0 45 36.673451605986926 39.0 35.0 40.0 32.0 41.0 46 36.4730769289254 38.0 35.0 40.0 31.0 41.0 47 36.31666598239443 38.0 35.0 40.0 31.0 41.0 48 36.36726107114455 38.0 35.0 40.0 31.0 41.0 49 36.515915411787425 39.0 35.0 40.0 31.0 41.0 50 36.35212344879287 38.0 35.0 40.0 31.0 41.0 51 35.658767123912575 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 7.0 10 14.0 11 14.0 12 22.0 13 29.0 14 31.0 15 52.0 16 92.0 17 152.0 18 348.0 19 662.0 20 1016.0 21 1377.0 22 1785.0 23 2407.0 24 3395.0 25 4791.0 26 6464.0 27 8518.0 28 10928.0 29 14807.0 30 20382.0 31 28413.0 32 39676.0 33 52202.0 34 66026.0 35 87638.0 36 111680.0 37 117206.0 38 69971.0 39 7525.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.999759744416718 3.8592953820748046 50.81633677142114 19.324608102087335 2 18.236919376004547 13.969037441855866 47.422650627325574 20.37139255481401 3 17.35268759323209 13.605764917514785 48.867225336928044 20.17432215232508 4 18.181265234560918 3.4531417979328896 54.91360682934099 23.451986138165207 5 24.586357436442512 4.504488065531991 46.362636911468854 24.546517586556636 6 20.07320192265291 12.904309850630973 48.97093059502793 18.05155763168819 7 72.8126477837943 1.5376357330000168 20.391312479756944 5.2584040034487325 8 71.86135732239714 8.946175146320211 11.143753430864935 8.04871410041771 9 66.72338523158054 4.13011512500133 13.435000980790198 15.71149866262794 10 36.598832479513646 22.961591039379105 21.9619453403342 18.477631140773045 11 27.501357139924547 23.529536990996498 28.282339846084366 20.686766022994586 12 23.336572221892755 19.431810751589413 33.098703988394746 24.132913038123085 13 23.344631428167382 20.861787653600107 36.89443808324704 18.899142834985472 14 19.477733021305195 25.39440691084541 30.329682360830436 24.798177707018958 15 15.360999219929658 24.426237734420262 37.946240532333384 22.266522513316698 16 17.02149983349376 23.73542690223879 30.95647572430216 28.286597539965303 17 16.901524102348876 25.28598777737735 33.276918889410965 24.535569230862805 18 16.550264357171855 23.3242553217372 34.59132981465346 25.53415050643748 19 18.139600658726067 25.55711164129537 31.488687459418855 24.814600240559702 20 20.670495549949592 25.472413945163947 35.19531410376304 18.661776401123422 21 22.43242051417736 27.152074181192244 29.713381171565295 20.702124133065098 22 18.844401056516325 23.17858136681097 31.60775082758925 26.369266749083454 23 19.203415886976476 27.473530069202734 29.23210970252405 24.09094434129674 24 21.783274257830733 22.969346124662234 28.5110388316888 26.73634078581823 25 18.125763153613033 27.880291895327638 25.59421440225779 28.399730548801532 26 18.494966037288275 24.11405753665038 29.382345472322708 28.008630953738635 27 22.099255967994306 24.780386629016487 28.74627641861038 24.374080984378825 28 16.361253160957556 23.692393781942208 33.91648533452549 26.02986772257475 29 21.105540628283556 20.33155270492813 28.256793682798765 30.306112983989554 30 24.375297468344804 23.62366243786428 29.031389848137184 22.96965024565373 31 20.928542211233317 23.54748012949472 26.885664192642402 28.638313466629562 32 21.242243013960675 28.195817424003966 24.675616947446372 25.886322614588984 33 22.318679263358135 21.706939888965426 27.154203028132713 28.82017781954373 34 20.12292570476238 22.882063400103096 27.756666712284815 29.23834418284971 35 20.73344859518911 23.454114985105676 26.348890642653274 29.46354577705194 36 20.64875089905768 22.304537637253606 30.245136725194747 26.80157473849396 37 20.46475769920305 22.669939008535156 31.92160369081235 24.94369960144944 38 21.221866907530494 24.28527765486221 29.174934956122943 25.31792048148435 39 21.418937310019416 21.089422215734306 28.97695219065953 28.514688283586743 40 23.634762854053857 22.557718362673405 28.714343714503375 25.09317506876936 41 18.62345715619502 24.662539744812076 28.341947560417434 28.37205553857547 42 19.360342318588028 24.128047102259163 31.27671512834666 25.23489545080615 43 22.26059215398254 20.215834667664183 31.097891985347452 26.425681193005822 44 21.594111001120687 19.9936742833769 30.26003865377802 28.152176061724397 45 20.940859111388875 18.810947747451845 28.6294939578762 31.618699183283077 46 24.16332513727261 21.413463132172502 28.69320730559446 25.730004424960427 47 17.727516715249994 20.976289206898073 36.481289716300736 24.8149043615512 48 19.444583833232212 21.32709277058785 30.21715759397719 29.011165802202747 49 19.659749434715106 19.359429955613543 35.50703812004568 25.473782489625673 50 21.839080459770116 17.808260838491986 31.122221664667073 29.23043703707083 51 19.246296946777306 18.29014054951622 28.215129106963914 34.24843339674256 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 144.0 1 488.0 2 832.0 3 2230.5 4 3629.0 5 2625.5 6 1622.0 7 1607.5 8 1593.0 9 1649.5 10 1706.0 11 1689.5 12 1673.0 13 1690.5 14 1708.0 15 1591.0 16 1474.0 17 1528.5 18 1583.0 19 1549.0 20 1515.0 21 1716.5 22 1918.0 23 2084.5 24 2251.0 25 2866.0 26 4198.0 27 4915.0 28 6119.5 29 7324.0 30 8113.0 31 8902.0 32 10416.0 33 11930.0 34 12931.5 35 13933.0 36 15400.0 37 16867.0 38 18771.0 39 20675.0 40 21408.0 41 22141.0 42 24703.0 43 27265.0 44 29789.5 45 32314.0 46 36303.5 47 40293.0 48 73875.0 49 107457.0 50 97021.0 51 86585.0 52 82577.5 53 78570.0 54 62212.0 55 45854.0 56 38618.5 57 31383.0 58 27543.0 59 23703.0 60 20658.0 61 17613.0 62 14556.5 63 11500.0 64 10006.5 65 8513.0 66 6885.5 67 5258.0 68 4377.0 69 3496.0 70 2959.5 71 2423.0 72 1998.0 73 1573.0 74 1212.0 75 685.0 76 519.0 77 419.0 78 319.0 79 261.0 80 203.0 81 132.0 82 61.0 83 52.5 84 44.0 85 23.5 86 3.0 87 5.0 88 7.0 89 6.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 657633.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.118393552844985 #Duplication Level Percentage of deduplicated Percentage of total 1 71.64219338558597 25.87600935689622 2 11.82271784125354 8.540351517092743 3 4.524919975335607 4.902985213929031 4 2.3160398256772035 3.3460655163148694 5 1.5429234758172923 2.786395866074623 6 1.1235121632126877 2.434767268339443 7 0.9198311804084336 2.325597720331883 8 0.7977759595549502 2.3051508859363383 9 0.6838263511559646 2.2228838345571393 >10 4.473472150149511 25.838244738987537 >50 0.08596967621560403 2.1889323349335226 >100 0.05490142685788894 3.65677747842244 >500 0.004681517018889755 1.1833146844716442 >1k 0.004681517018889755 3.9984907212881797 >5k 0.001276777368788115 2.6942006332468833 >10k+ 0.001276777368788115 5.699832229177522 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGC 13636 2.0734969200146587 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCG 12669 1.9264544206267022 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC 10775 1.6384518416806944 No Hit CCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 7010 1.065944075190874 No Hit GCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 5343 0.8124592287795777 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGTCGCATT 5174 0.7867610049982284 No Hit CTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGCT 3869 0.5883220580475736 No Hit GAACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT 3411 0.5186783509951599 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTA 3257 0.4952610346500252 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTC 2925 0.44477695006181256 No Hit TCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGC 2743 0.41710193983574423 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCT 2477 0.3766538479668752 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1973 0.3000153581100705 No Hit CGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 1837 0.27933513068839305 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGTCGCATTCGT 1201 0.1826246553929015 No Hit TGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTGCTT 1193 0.1814081714269205 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCC 1126 0.1712201182118294 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATG 940 0.14293686600277053 No Hit TCCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 828 0.12590609047903617 No Hit CGTTCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTC 826 0.12560196948754093 No Hit TGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCTG 781 0.11875924717889765 No Hit TTCCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTATGCCGTCTTCT 768 0.11678246073417847 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGTCGCATTCGTAT 711 0.10811501247656367 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6454968044486818 0.0 2 0.0 0.0 0.0 3.138072450743804 0.0 3 0.0 0.0 0.0 4.095901513458114 0.0 4 0.0 0.0 0.0 5.772672600067211 0.0 5 0.0 0.0 0.0 9.177155039360859 0.0 6 0.0 0.0 0.0 10.24264293306449 0.0 7 0.0 0.0 0.0 11.623504294948702 0.0 8 0.0 0.0 0.0 13.480771190010234 0.0 9 0.0 0.0 0.0 14.094335290351914 0.0 10 0.0 0.0 0.0 17.352535532736344 0.0 11 0.0 0.0 0.0 19.901069441466593 0.0 12 0.0 0.0 0.0 24.17625027941116 0.0 13 0.0 0.0 0.0 25.017296881391292 0.0 14 0.0 0.0 0.0 25.35912887583196 0.0 15 0.0 0.0 0.0 26.29141177526067 0.0 16 0.0 0.0 0.0 27.290753353314084 0.0 17 0.0 0.0 0.0 28.56502030767921 0.0 18 0.0 0.0 0.0 29.785914028036913 0.0 19 0.0 0.0 0.0 31.589959749586775 0.0 20 0.0 0.0 0.0 32.60891713159163 0.0 21 0.0 0.0 0.0 33.84471278053261 0.0 22 0.0 0.0 0.0 35.2363704376149 0.0 23 0.0 0.0 0.0 36.4482925887235 0.0 24 0.0 0.0 0.0 37.43820641604056 0.0 25 0.0 0.0 0.0 38.294459067595454 0.0 26 0.0 0.0 0.0 39.06297281310397 0.0 27 0.0 0.0 0.0 39.84228285381056 0.0 28 0.0 0.0 0.0 40.60395387701043 0.0 29 0.0 0.0 0.0 41.406833294557906 0.0 30 0.0 0.0 0.0 42.24833607802528 0.0 31 0.0 0.0 0.0 43.0258213927829 0.0 32 0.0 0.0 0.0 43.782930601110344 0.0 33 0.0 0.0 0.0 44.51935958201611 0.0 34 0.0 0.0 0.0 45.276164669352056 0.0 35 0.0015206049574762823 0.0 0.0 46.023389945455904 0.0 36 0.0015206049574762823 0.0 0.0 46.75829832140419 0.0 37 0.0015206049574762823 0.0 0.0 47.501722085114345 0.0 38 0.0015206049574762823 0.0 0.0 48.21275696323025 0.0 39 0.0015206049574762823 0.0 0.0 48.94386382678485 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 100 0.0 45.000004 6 AGACGAA 25 3.8889782E-5 45.000004 11 TATCCGT 25 3.8889782E-5 45.000004 40 ACCGACG 20 7.031082E-4 45.0 17 ACGGGCT 40 6.8066583E-9 45.0 5 ATTCCGA 20 7.031082E-4 45.0 12 TACGCGG 20 7.031082E-4 45.0 2 CGAGGTA 55 1.8189894E-12 45.0 39 GAAACGC 20 7.031082E-4 45.0 21 GACGAAT 20 7.031082E-4 45.0 20 GCTAACC 40 6.8066583E-9 45.0 27 CTCGAAC 30 2.1640808E-6 44.999996 13 TTTGTCG 145 0.0 43.448273 1 TACGGCT 1745 0.0 42.421207 7 TCGTTCA 70 0.0 41.785713 16 ACGGCTG 1775 0.0 41.704224 8 CCGATGA 175 0.0 41.142857 18 TTGGGAC 905 0.0 41.022102 5 AATGATC 450 0.0 41.0 2 TCTTGCG 220 0.0 40.909092 1 >>END_MODULE