##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933765.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 345332 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.663581712670705 31.0 25.0 33.0 16.0 34.0 2 28.887563272445067 31.0 28.0 33.0 16.0 34.0 3 29.659096174116502 31.0 30.0 34.0 16.0 34.0 4 32.97325472299121 35.0 32.0 37.0 28.0 37.0 5 33.98305109286136 35.0 33.0 37.0 28.0 37.0 6 33.54183510361044 35.0 33.0 37.0 28.0 37.0 7 33.81028112077653 35.0 33.0 36.0 30.0 37.0 8 33.97727983505728 35.0 35.0 37.0 29.0 37.0 9 35.04045671991012 37.0 34.0 39.0 30.0 39.0 10 33.85400426256472 35.0 32.0 39.0 27.0 39.0 11 34.32193946694775 37.0 32.0 39.0 27.0 39.0 12 34.33834686620412 37.0 32.0 39.0 27.0 39.0 13 34.82957559681697 37.0 34.0 39.0 28.0 39.0 14 34.40188282580242 37.0 32.0 39.0 25.0 40.0 15 34.89647933003602 37.0 32.0 39.0 27.0 40.0 16 34.47978177521921 36.0 32.0 39.0 27.0 40.0 17 34.42681245873536 36.0 32.0 38.0 27.0 40.0 18 34.396511183440865 37.0 32.0 39.0 27.0 40.0 19 33.983737388947446 36.0 32.0 39.0 25.0 40.0 20 35.294334148008296 37.0 34.0 39.0 29.0 40.0 21 34.409353897119296 37.0 32.0 39.0 25.0 40.0 22 35.402586496472956 37.0 34.0 39.0 28.0 40.0 23 36.34548202888814 38.0 34.0 39.0 31.0 40.0 24 36.435160946567365 38.0 35.0 40.0 31.0 40.0 25 34.3569405673381 37.0 32.0 39.0 25.0 40.0 26 34.91356723385032 37.0 33.0 39.0 27.0 40.0 27 35.662365491758656 37.0 34.0 39.0 30.0 40.0 28 35.96135602840165 38.0 34.0 40.0 30.0 40.0 29 36.31494330093938 38.0 35.0 40.0 30.0 41.0 30 34.34227641805567 37.0 33.0 39.0 24.0 40.0 31 35.06799833203989 37.0 33.0 39.0 27.0 40.0 32 35.48600187645512 37.0 34.0 39.0 30.0 40.0 33 36.3093313101595 38.0 35.0 40.0 31.0 40.0 34 36.54660153128005 38.0 35.0 40.0 31.0 41.0 35 36.77567963582871 39.0 35.0 40.0 31.0 41.0 36 36.56919138683933 38.0 35.0 40.0 31.0 41.0 37 36.78248178564396 39.0 35.0 40.0 31.0 41.0 38 36.21024405499635 38.0 35.0 40.0 30.0 41.0 39 36.082833331402824 38.0 35.0 40.0 30.0 41.0 40 35.76051741512516 38.0 34.0 40.0 30.0 41.0 41 35.24251155409866 37.0 33.0 40.0 29.0 41.0 42 36.244237429488145 38.0 35.0 40.0 31.0 41.0 43 36.2486187205356 38.0 35.0 40.0 31.0 41.0 44 36.60315290792629 38.0 35.0 40.0 31.0 41.0 45 36.894585500330116 39.0 35.0 40.0 32.0 41.0 46 36.65776701840548 39.0 35.0 40.0 32.0 41.0 47 36.62766844659632 39.0 35.0 40.0 31.0 41.0 48 36.63112019737528 38.0 35.0 40.0 32.0 41.0 49 36.80879269804131 39.0 35.0 40.0 32.0 41.0 50 36.65251410237105 39.0 35.0 40.0 32.0 41.0 51 35.85465580948189 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 9.0 11 7.0 12 5.0 13 12.0 14 9.0 15 31.0 16 22.0 17 66.0 18 116.0 19 243.0 20 334.0 21 480.0 22 770.0 23 989.0 24 1493.0 25 2242.0 26 3097.0 27 4020.0 28 5359.0 29 7428.0 30 10263.0 31 14752.0 32 20602.0 33 27422.0 34 34301.0 35 46006.0 36 59541.0 37 64675.0 38 37664.0 39 3370.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.144313298506944 3.6153614492720045 50.09121656840374 19.14910868381731 2 17.671979428492 11.50168533469241 49.92123521712439 20.905100019691194 3 18.16628635631798 11.478229645674308 50.955602145182034 19.399881852825686 4 18.515225927513235 3.614203143641481 54.323086189521966 23.54748473932332 5 22.639952277808025 4.7021417071108385 48.58310263746192 24.07480337761922 6 19.896794968320343 10.437492036648791 50.382530434480444 19.283182560550426 7 72.51311781126569 1.4351406762188272 19.602585338167327 6.449156174348164 8 71.52450395561372 7.084197236282766 11.78199529727914 9.609303510824367 9 67.21415912802752 3.5927744894767932 14.77042382403021 14.422642558465476 10 36.259889034320594 22.683678315360293 23.460611817034042 17.59582083328507 11 26.74238124471523 25.19720153359665 28.02578388333546 20.03463333835266 12 22.138695516198904 20.26484658241924 34.39298993432407 23.20346796705779 13 21.27257248097483 23.261672824991603 36.11452167768988 19.35123301634369 14 18.55721450661972 26.263132290086062 31.03332445299017 24.146328750304054 15 15.022065722261477 25.430600118147172 37.983447812539815 21.563886347051533 16 16.64224572295646 26.279927721728658 29.972895648245746 27.104930907069143 17 16.730566527283887 26.17191572168232 31.74394495731644 25.353572793717348 18 17.313194259437296 23.5136042996305 34.705732454565464 24.467468986366743 19 18.50422202402326 24.335422144487044 31.451472785609212 25.708883045880487 20 20.023919011270312 26.163518005861025 35.22407422422481 18.588488758643855 21 21.854621060312972 27.86564812991556 30.14084996467168 20.138880845099788 22 18.493797273348545 25.165348128757252 30.83901868346982 25.50183591442438 23 19.056154656967788 26.153382831593948 29.470191004598473 25.32027150683979 24 21.82508426673462 23.149606755238437 28.304645963884028 26.720663014142907 25 16.971204522025182 27.11680353978201 27.361495604230136 28.550496333962677 26 17.825165348128756 23.970266294464455 32.82551283981792 25.37905551758887 27 22.95095733960363 24.82683330823671 28.77810339036058 23.44410596179908 28 18.66551608307368 22.96717361843096 34.166251607149064 24.2010586913463 29 21.362051590932786 19.640230271159346 34.90467144660791 24.093046691299964 30 27.552616033266535 22.85713458353121 29.504940173514182 20.085309209688067 31 27.88041652670474 22.681651280506873 26.702419700462166 22.735512492326226 32 23.16958752736497 24.184842412518968 29.095189556716434 23.550380503399627 33 24.90530851470469 20.345348823740633 29.180325020559927 25.56901764099475 34 23.819107409681116 20.393128930999733 32.13313564917239 23.65462801014676 35 20.414268008756792 19.819478067482883 30.40581237765397 29.360441546106358 36 26.41139541079309 20.705871451241126 32.394623145263104 20.488109992702675 37 24.46660025714385 21.062050432627153 34.27918640612512 20.192162904103878 38 25.201255603303487 23.15337124853764 28.121054521446027 23.524318626712844 39 25.513129394321986 20.207510453708316 34.45901335526392 19.820346796705778 40 27.04527816709717 19.60924559554284 28.990362897154043 24.355113340205946 41 23.670844288974088 21.296028169992933 27.764585963652372 27.268541577380606 42 21.587342036069636 18.00557145008282 32.51392862520704 27.893157888640495 43 25.484461329966525 17.97169101039 32.180336603616226 24.363511056027242 44 23.075475194884923 18.36551492476805 32.099834362294835 26.45917551805219 45 23.635226390835488 17.28568450071236 29.529264591755183 29.549824516696976 46 27.025297394970636 19.035015579210732 32.17193888779493 21.7677481380237 47 20.444094378742776 18.588199182236227 37.86472148541114 23.10298495360986 48 21.97595357511033 19.607508137097053 31.85572145066197 26.560816837130645 49 23.067077479063624 16.153730323283103 37.576013807003115 23.203178390650155 50 25.542376611492706 15.457299062930746 31.927825976162072 27.072498349414474 51 21.358866250448845 15.913092328541808 29.158027637172346 33.570013783837005 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 52.0 1 187.0 2 322.0 3 946.0 4 1570.0 5 1145.0 6 720.0 7 729.5 8 739.0 9 830.5 10 922.0 11 947.0 12 972.0 13 935.5 14 899.0 15 910.0 16 921.0 17 959.0 18 997.0 19 1020.0 20 1043.0 21 1008.5 22 974.0 23 1140.0 24 1306.0 25 1650.5 26 2274.0 27 2553.0 28 3023.0 29 3493.0 30 3492.0 31 3491.0 32 4522.5 33 5554.0 34 5868.5 35 6183.0 36 6936.0 37 7689.0 38 8546.0 39 9403.0 40 10514.0 41 11625.0 42 13570.0 43 15515.0 44 17097.0 45 18679.0 46 21101.5 47 23524.0 48 39807.5 49 56091.0 50 54180.5 51 52270.0 52 49759.0 53 47248.0 54 36035.0 55 24822.0 56 19960.5 57 15099.0 58 12160.0 59 9221.0 60 7680.5 61 6140.0 62 5139.0 63 4138.0 64 3789.0 65 3440.0 66 2762.0 67 2084.0 68 1673.0 69 1262.0 70 1096.5 71 931.0 72 757.5 73 584.0 74 497.5 75 320.0 76 229.0 77 172.0 78 115.0 79 88.5 80 62.0 81 41.0 82 20.0 83 18.5 84 17.0 85 11.5 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 345332.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.521460570575485 #Duplication Level Percentage of deduplicated Percentage of total 1 69.99270225715132 24.8624301345543 2 12.883658114737633 9.152927074548554 3 5.220126800346189 5.562795849357046 4 2.630251596364068 3.7372151348375784 5 1.5341595018419296 2.7247793126825917 6 1.0981581966764524 2.3404909850098132 7 0.8074848469506963 2.0078128806607443 8 0.6531837664114116 1.856163312313836 9 0.5538879864174798 1.7707419243039566 >10 4.450784467949609 26.731855686657944 >50 0.10175096111682315 2.546362765571417 >100 0.05826063096205196 3.743468062984628 >500 0.004102861335355772 0.909706752672664 >1k 0.009026294937782698 7.196914267940002 >5k 0.002461716801213463 4.856335855904921 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC 5905 1.7099486870605678 No Hit CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 5509 1.5952764296387245 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG 5247 1.5194074108394242 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 4643 1.34450326063035 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 4145 1.200294209630153 No Hit CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT 3743 1.083884493762524 No Hit TCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 2533 0.733497040529114 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGGTGGCTT 2242 0.649230305908517 No Hit GAACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT 1574 0.45579326561106415 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTA 1403 0.40627569990617723 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTC 1178 0.3411210081892208 No Hit CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 1116 0.3231672709161039 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCT 1076 0.3115842146108672 No Hit TGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCTT 1038 0.30058031112089234 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 859 0.24874613415495814 No Hit TCCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 716 0.20733670786373692 No Hit TTCCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT 525 0.1520276140062317 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGT 511 0.14797354429939882 No Hit CGTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 510 0.1476839678917679 No Hit TGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 490 0.14189243973914958 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCC 470 0.13610091158653123 No Hit TTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 467 0.13523218236363846 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATG 417 0.12075336198209259 No Hit TGCCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT 365 0.10569538878528488 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.2223020166101028 0.0 2 0.0 0.0 0.0 5.055424924420557 0.0 3 2.895764076309175E-4 0.0 0.0 6.326086201105023 0.0 4 2.895764076309175E-4 0.0 0.0 8.23120938690883 0.0 5 2.895764076309175E-4 0.0 0.0 11.837014814729015 0.0 6 2.895764076309175E-4 0.0 0.0 13.011826300487646 0.0 7 2.895764076309175E-4 0.0 0.0 14.520808960652358 0.0 8 2.895764076309175E-4 0.0 0.0 16.49427217865706 0.0 9 2.895764076309175E-4 0.0 0.0 17.196784543569667 0.0 10 2.895764076309175E-4 0.0 0.0 20.17044467353156 0.0 11 2.895764076309175E-4 0.0 0.0 23.06562959702547 0.0 12 2.895764076309175E-4 0.0 0.0 27.245954617585397 0.0 13 2.895764076309175E-4 0.0 0.0 28.249047293618894 0.0 14 2.895764076309175E-4 0.0 0.0 28.62115297742462 0.0 15 2.895764076309175E-4 0.0 0.0 29.51275873652022 0.0 16 2.895764076309175E-4 0.0 0.0 30.604461793288777 0.0 17 2.895764076309175E-4 0.0 0.0 32.197421611666456 0.0 18 2.895764076309175E-4 0.0 0.0 33.82628890459036 0.0 19 2.895764076309175E-4 0.0 0.0 35.6202147498639 0.0 20 2.895764076309175E-4 0.0 0.0 36.93662909895405 0.0 21 2.895764076309175E-4 0.0 0.0 38.49686678326943 0.0 22 2.895764076309175E-4 0.0 0.0 40.02930513245225 0.0 23 2.895764076309175E-4 0.0 0.0 41.33616346009058 0.0 24 2.895764076309175E-4 0.0 0.0 42.454507546361185 0.0 25 2.895764076309175E-4 0.0 0.0 43.45412530550311 0.0 26 2.895764076309175E-4 0.0 0.0 44.32198579917297 0.0 27 2.895764076309175E-4 0.0 0.0 45.17420916683076 0.0 28 2.895764076309175E-4 0.0 0.0 46.09593087231997 0.0 29 2.895764076309175E-4 0.0 0.0 47.01417766091761 0.0 30 2.895764076309175E-4 0.0 0.0 47.972675570175944 0.0 31 2.895764076309175E-4 0.0 0.0 48.82721554909478 0.0 32 2.895764076309175E-4 0.0 0.0 49.61486337785088 0.0 33 2.895764076309175E-4 0.0 0.0 50.40917146398249 0.0 34 2.895764076309175E-4 0.0 0.0 51.17104699245943 0.0 35 2.895764076309175E-4 0.0 0.0 51.930026756860066 0.0 36 2.895764076309175E-4 0.0 0.0 52.68234626388519 0.0 37 2.895764076309175E-4 0.0 0.0 53.41178923470747 0.0 38 2.895764076309175E-4 0.0 0.0 54.1866957015278 0.0 39 2.895764076309175E-4 0.0 0.0 55.01546338016749 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGTT 30 2.1610758E-6 45.000004 33 CCTCGAT 25 3.8851183E-5 45.000004 15 ATCCGGC 50 2.1827873E-11 45.000004 6 TCTCGGA 25 3.8851183E-5 45.000004 21 TAGGGTA 30 2.1610758E-6 45.000004 5 CGGGATA 30 2.1610758E-6 45.000004 6 TAGGGCA 25 3.8851183E-5 45.000004 5 CTCGATC 25 3.8851183E-5 45.000004 16 CCAAACG 25 3.8851183E-5 45.000004 2 GTACGGT 30 2.1610758E-6 45.000004 32 CCTTCCG 20 7.026425E-4 45.0 1 CGGGTTG 20 7.026425E-4 45.0 6 ATGGGCG 40 6.7921064E-9 45.0 5 CGGGTAC 20 7.026425E-4 45.0 6 AGCCGGG 20 7.026425E-4 45.0 11 TCCGCGG 70 0.0 45.0 2 AGTTTCG 20 7.026425E-4 45.0 12 CTCGTAC 35 1.2086275E-7 45.0 29 TTAATAG 40 6.7921064E-9 45.0 22 GTACAGC 20 7.026425E-4 45.0 11 >>END_MODULE