##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933764.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 409648 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.79682312619615 31.0 16.0 33.0 16.0 34.0 2 27.952190661250636 31.0 25.0 33.0 16.0 34.0 3 28.815426903097293 31.0 28.0 34.0 16.0 34.0 4 32.43449986329727 35.0 30.0 35.0 26.0 37.0 5 33.79865884857243 35.0 33.0 37.0 28.0 37.0 6 33.035608620083586 35.0 33.0 37.0 28.0 37.0 7 33.63221595125571 35.0 32.0 35.0 30.0 37.0 8 33.50846092254814 35.0 33.0 37.0 28.0 37.0 9 34.725129867593644 37.0 33.0 39.0 28.0 39.0 10 34.05172001327969 35.0 32.0 39.0 27.0 39.0 11 34.55904825606374 37.0 33.0 39.0 27.0 39.0 12 34.50971077608093 37.0 33.0 39.0 27.0 39.0 13 34.93841542006796 37.0 34.0 39.0 30.0 39.0 14 34.62273219935164 37.0 33.0 39.0 27.0 40.0 15 35.05971956411358 37.0 33.0 39.0 27.0 40.0 16 34.32425155255243 36.0 32.0 39.0 27.0 40.0 17 34.448367867046834 36.0 32.0 38.0 27.0 40.0 18 34.36352917626841 37.0 32.0 39.0 27.0 40.0 19 33.95038179119634 36.0 32.0 39.0 25.0 40.0 20 35.14170946764051 37.0 33.0 39.0 27.0 40.0 21 34.5305603835488 37.0 32.0 39.0 27.0 40.0 22 35.51534732257939 37.0 34.0 39.0 29.0 40.0 23 36.28166376987072 38.0 34.0 39.0 31.0 40.0 24 36.39628656798031 38.0 35.0 40.0 31.0 40.0 25 34.304510213646836 37.0 32.0 39.0 25.0 40.0 26 34.99606491426786 37.0 33.0 39.0 27.0 40.0 27 35.829233878842324 37.0 34.0 39.0 30.0 40.0 28 35.92692994961528 38.0 34.0 40.0 30.0 40.0 29 36.322747822520796 38.0 35.0 40.0 30.0 40.0 30 34.57481301019412 37.0 33.0 39.0 25.0 40.0 31 35.14848357614342 37.0 33.0 39.0 27.0 40.0 32 35.6913496465258 37.0 34.0 40.0 30.0 40.0 33 36.35813918290825 38.0 35.0 40.0 31.0 40.0 34 36.47639436784752 38.0 35.0 40.0 31.0 41.0 35 36.70888421278757 38.0 35.0 40.0 31.0 41.0 36 36.57787417490138 38.0 35.0 40.0 31.0 41.0 37 36.80856979650822 39.0 35.0 40.0 31.0 41.0 38 36.28990987384291 38.0 35.0 40.0 30.0 41.0 39 36.2905348006093 38.0 35.0 40.0 31.0 41.0 40 35.8494976174667 38.0 34.0 40.0 30.0 41.0 41 35.22294262391126 37.0 33.0 40.0 29.0 40.0 42 36.21207231574425 38.0 35.0 40.0 31.0 41.0 43 36.23936648049057 38.0 35.0 40.0 31.0 41.0 44 36.645412646955435 38.0 35.0 40.0 31.0 41.0 45 36.977956684763505 39.0 35.0 40.0 32.0 41.0 46 36.794626118033044 39.0 35.0 40.0 32.0 41.0 47 36.63378070929188 39.0 35.0 40.0 31.0 41.0 48 36.69780885052533 39.0 35.0 40.0 31.0 41.0 49 36.891682615318516 39.0 35.0 40.0 32.0 41.0 50 36.70959701988048 39.0 35.0 40.0 31.0 41.0 51 35.97545209545756 38.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 15.0 11 12.0 12 9.0 13 10.0 14 14.0 15 30.0 16 39.0 17 71.0 18 142.0 19 253.0 20 420.0 21 591.0 22 812.0 23 1124.0 24 1657.0 25 2409.0 26 3506.0 27 4696.0 28 6259.0 29 8844.0 30 12387.0 31 17624.0 32 24434.0 33 33362.0 34 43506.0 35 58084.0 36 72855.0 37 73163.0 38 39820.0 39 3498.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.902638362691874 4.1298871226028195 45.05282584072179 17.914648673983518 2 17.870220286685154 17.030963168378705 43.58424793969456 21.514568605241575 3 17.926366050853414 16.85227317111276 46.386653907745185 18.834706870288638 4 18.717777213607782 3.7978947779557086 54.19213568722415 23.292192321212358 5 24.920419482091944 4.789233683552709 44.94175487247588 25.348591961879468 6 19.65834081943522 14.491465843846424 45.952378627504594 19.897814709213765 7 66.21318790766708 1.7356364488536498 24.843280084365112 7.207895559114166 8 62.56566613287505 10.73726711713471 14.689928914580323 12.007137835409914 9 57.68366988243565 4.7160000781158455 17.7213119556302 19.879018083818302 10 32.58797797133148 23.803606999179785 24.820333554661563 18.788081474827166 11 26.13487677225325 22.39605710268328 29.96475022458306 21.50431590048041 12 20.636253564035464 18.265681756044213 36.1810627660821 24.91700191383822 13 20.57839901574034 22.2095555208374 39.4773073467953 17.734738116626957 14 18.3733351560364 26.464183884701008 29.765310705776667 25.397170253485918 15 12.450933484357302 24.85572979728938 41.01545717298754 21.677879545365776 16 14.359889466078194 25.087147990469866 29.029312971136196 31.523649572315744 17 14.400167949068468 25.997685818068195 32.80597000351521 26.796176229348124 18 14.683337890091005 22.920897941647464 36.00359332890677 26.392170839354762 19 16.206840995195876 25.019773073467956 31.179207514744366 27.59417841659181 20 17.796986681248292 25.755770808108423 37.8500566339882 18.59718587665508 21 20.685320079678164 27.855378275983284 30.35703823770652 21.102263406632034 22 16.119693004726006 23.967406163340232 31.592489161426396 28.32041167050736 23 17.070753427332736 28.14391868140452 28.927518259578953 25.857809631683786 24 21.847293285943053 22.406065695426317 27.20921376401203 28.537427254618596 25 14.955522790298012 30.23766746084443 24.387034722493457 30.4197750263641 26 15.614381127211654 26.42683474592821 29.395236886302385 28.563547240557746 27 18.302054446744524 26.19492832871148 27.22019880482756 28.28281841971644 28 12.572745381400619 24.319659805491543 37.14774635784869 25.95984845525915 29 17.153263289458266 22.871831426004764 32.61312150919814 27.36178377533883 30 17.174989259071204 22.95214427996719 34.425165019724254 25.447701441237353 31 22.05234738116627 23.069562160684296 30.07704175291958 24.801048705229856 32 18.94504550248018 26.742715697379214 28.888704448697418 25.423534351443188 33 21.53800335898137 18.868638440807718 29.20751474436589 30.38584345584502 34 24.034781080342146 22.208334960746786 29.5863765964926 24.170507362418466 35 17.538472054056164 20.146808967699098 27.46479904698668 34.84991993125806 36 23.184294809202047 23.767478420497596 29.709897277662773 23.338329492637584 37 17.76207866265672 19.382494238956372 37.05229855876265 25.803128539624264 38 18.698492364176072 21.86145178299418 34.60946959340702 24.830586259422724 39 24.69290708120142 19.39445572784439 36.275045893059406 19.637591297894776 40 21.775280240596807 18.99167089794165 33.5229270007421 25.710121860719447 41 25.68424598679842 21.778453696832404 24.48223840956138 28.055061906807794 42 21.170126547670197 17.992520407764715 30.55769831660352 30.27965472796157 43 27.559514510018357 18.23223840956138 27.450640549935557 26.757606530484708 44 19.676649220794438 17.68152169667617 33.02493848377143 29.616890598757955 45 19.203804241690428 15.678826699996092 31.68696051243995 33.43040854587353 46 26.026735148224816 18.809319220403857 32.42320235909854 22.74074327227278 47 15.161797445611844 17.66882787173378 42.73278522048197 24.4365894621724 48 20.116783189469984 19.180613599968755 31.34666835917666 29.355934851384603 49 19.58437487794399 14.483898371284615 40.80063859703941 25.131088153731984 50 24.163428113892905 14.212934031168222 32.84356325430613 28.780074600632737 51 19.568507596766004 14.561525993047688 29.096687888138106 36.773278522048194 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 83.0 1 218.5 2 354.0 3 1076.5 4 1799.0 5 1282.5 6 766.0 7 754.5 8 743.0 9 882.0 10 1021.0 11 1035.5 12 1050.0 13 1040.0 14 1030.0 15 999.5 16 969.0 17 903.0 18 837.0 19 935.0 20 1033.0 21 977.5 22 922.0 23 1290.0 24 1658.0 25 1753.5 26 2053.0 27 2257.0 28 2675.0 29 3093.0 30 3422.0 31 3751.0 32 4690.0 33 5629.0 34 6037.5 35 6446.0 36 7133.5 37 7821.0 38 8961.5 39 10102.0 40 11575.5 41 13049.0 42 15540.0 43 18031.0 44 22082.0 45 26133.0 46 55473.5 47 84814.0 48 75774.0 49 66734.0 50 63147.5 51 59561.0 52 44428.0 53 29295.0 54 23672.5 55 18050.0 56 14634.5 57 11219.0 58 9789.5 59 8360.0 60 7487.0 61 6614.0 62 5693.5 63 4773.0 64 4068.0 65 3363.0 66 2882.0 67 2401.0 68 1944.5 69 1488.0 70 1197.5 71 907.0 72 854.5 73 802.0 74 575.0 75 313.0 76 278.0 77 189.0 78 100.0 79 73.5 80 47.0 81 47.5 82 48.0 83 28.0 84 8.0 85 7.0 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 2.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 409648.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.70223723085452 #Duplication Level Percentage of deduplicated Percentage of total 1 69.46489472915952 22.7165746664931 2 12.857598460142578 8.409444701253047 3 5.406361052295243 5.30400305063434 4 2.8361634223306744 3.709955562501198 5 1.716881453805263 2.807293229979705 6 1.2195960050148362 2.393011072907857 7 0.9194793504799397 2.1048322293786907 8 0.7014104516714095 1.83501527894074 9 0.614233441866265 1.8078126957931397 >10 4.064404430639393 21.98928493778378 >50 0.10361831682300607 2.362163658431806 >100 0.07733830893311323 5.017265076168098 >500 0.006757716314543875 1.6812613897383137 >1k 0.007508573682826527 6.916572342069347 >5k 0.0030034294731306112 8.078747040131482 >10k+ 7.508573682826528E-4 2.866763067795357 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGC 11675 2.85000781158458 No Hit GAATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 9986 2.4377026129750416 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCG 9658 2.3576338710307385 No Hit GCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 6875 1.6782701245947742 No Hit CCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 6382 1.5579228996601961 No Hit CTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCT 4583 1.1187653790571417 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACTTTGCGT 3970 0.9691247119478186 No Hit TCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGC 3783 0.9234757645588407 No Hit GAACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 3472 0.8475569269226263 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTA 2926 0.7142717650275359 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTC 2367 0.577813146896848 No Hit GAATGACTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCT 2309 0.5636546498457212 No Hit TGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTGCTT 2219 0.5416845682146623 Illumina Single End Adapter 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 1486 0.36275045893059404 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1053 0.2570499550833887 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCACTTTGCGTCGT 996 0.24313557005038472 No Hit TCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 936 0.22848884896301214 No Hit TGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 844 0.20603054329570752 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATG 786 0.1918720462445807 No Hit TTCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 781 0.19065148615396635 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTAT 678 0.16550794828731008 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCC 630 0.15379057141741204 No Hit TTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCTG 627 0.1530582353630434 No Hit CGTTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 569 0.13889973831191657 No Hit CGTCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 499 0.12181189704331523 No Hit TGCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 489 0.11937077686208647 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCACTTTGCG 478 0.11668554466273484 No Hit TTTCCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTC 421 0.10277115962973091 No Hit GTTCAGGGGAAATGTAATACTGGAATAATTTGTAAATGATTTTAATTTTAT 414 0.10106237550287075 No Hit TTGCTGTCTCTTATACACATCTGACGCACTTTGCGTCGTATGCCGTCTTCT 411 0.10033003944850212 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.2652325899308674 0.0 2 0.0 0.0 0.0 5.7283326172714135 0.0 3 0.0 0.0 0.0 7.253544506503144 0.0 4 0.0 0.0 0.0 10.03788618521267 0.0 5 0.0 0.0 0.0 15.20476116080147 0.0 6 0.0 0.0 0.0 16.618413857751044 0.0 7 0.0 0.0 0.0 18.62184119048549 0.0 8 0.0 0.0 0.0 21.17134710776081 0.0 9 0.0 0.0 0.0 22.00669843377729 0.0 10 0.0 0.0 0.0 26.163437878373628 0.0 11 0.0 0.0 0.0 29.265857516697263 0.0 12 0.0 0.0 0.0 35.0083486310198 0.0 13 0.0 0.0 0.0 36.21328555247432 0.0 14 0.0 0.0 0.0 36.67856305901652 0.0 15 0.0 0.0 0.0 37.95697769792602 0.0 16 0.0 0.0 0.0 39.29397922118502 0.0 17 0.0 0.0 0.0 40.94832636800375 0.0 18 0.0 0.0 0.0 42.634408077178456 0.0 19 0.0 0.0 0.0 44.76965589969925 0.0 20 0.0 0.0 0.0 46.12935984064367 0.0 21 0.0 0.0 0.0 47.62601062375503 0.0 22 0.0 0.0 0.0 49.1004472132172 0.0 23 0.0 0.0 0.0 50.39643791743155 0.0 24 0.0 0.0 0.0 51.40291176815217 0.0 25 0.0 0.0 0.0 52.254374487364764 0.0 26 0.0 0.0 0.0 53.03821817755732 0.0 27 0.0 0.0 0.0 53.84061438112721 0.0 28 0.0 0.0 0.0 54.621528727102294 0.0 29 0.0 0.0 0.0 55.44394211615826 0.0 30 0.0 0.0 0.0 56.32518650158185 0.0 31 0.0 0.0 0.0 57.10878607975628 0.0 32 0.0 0.0 0.0 57.85991875952037 0.0 33 0.0 0.0 0.0 58.55002343475374 0.0 34 0.0 0.0 0.0 59.23426942155216 0.0 35 0.0 0.0 0.0 59.95562043510526 0.0 36 0.0 0.0 0.0 60.667206967933446 0.0 37 0.0 0.0 0.0 61.36658789985549 0.0 38 0.0 0.0 0.0 62.00860250751865 0.0 39 0.0 0.0 0.0 62.65525524352615 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCCG 20 7.027965E-4 45.0 25 CGGGTTC 20 7.027965E-4 45.0 6 GCAAGCC 20 7.027965E-4 45.0 44 GGTCGCT 20 7.027965E-4 45.0 35 GACACGA 40 6.7957444E-9 45.0 25 TCGGGTA 25 3.8863946E-5 45.0 5 CATTCTA 20 7.027965E-4 45.0 45 AGGCGCG 20 7.027965E-4 45.0 10 CCGCTAC 20 7.027965E-4 45.0 34 CCGTCGC 20 7.027965E-4 45.0 22 ATTCCGG 25 3.8863946E-5 45.0 4 AGTGCGG 20 7.027965E-4 45.0 21 ACTAGGG 20 7.027965E-4 45.0 3 TATCTTG 20 7.027965E-4 45.0 1 GCTTAGA 20 7.027965E-4 45.0 14 AGACACG 40 6.7957444E-9 45.0 24 ATTGGTG 20 7.027965E-4 45.0 12 GGACCCA 40 6.7957444E-9 45.0 8 ATACGAA 40 6.7957444E-9 45.0 19 GCTAATT 20 7.027965E-4 45.0 29 >>END_MODULE