##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933758.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 507621 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.246715561412945 30.0 16.0 33.0 16.0 34.0 2 27.570342834516303 31.0 25.0 33.0 16.0 34.0 3 28.567618360942514 31.0 28.0 34.0 16.0 34.0 4 32.32459453017113 35.0 28.0 35.0 27.0 37.0 5 33.689912355871805 35.0 33.0 37.0 28.0 37.0 6 32.81080372955414 35.0 32.0 37.0 26.0 37.0 7 33.483833411147295 35.0 32.0 35.0 29.0 37.0 8 33.37559714826613 35.0 33.0 37.0 28.0 37.0 9 34.690231491604955 37.0 32.0 39.0 29.0 39.0 10 33.427728561269134 35.0 31.0 38.0 27.0 39.0 11 33.60180528386336 35.0 32.0 39.0 27.0 39.0 12 33.63713282153417 35.0 31.0 39.0 25.0 39.0 13 33.83308413166516 35.0 32.0 38.0 25.0 39.0 14 33.89697431745338 36.0 32.0 39.0 23.0 40.0 15 34.35218795124709 36.0 32.0 39.0 25.0 40.0 16 34.03854056471265 36.0 32.0 39.0 27.0 40.0 17 34.016951623356796 36.0 32.0 38.0 26.0 40.0 18 34.071947378063555 36.0 32.0 39.0 25.0 40.0 19 33.62071900098696 35.0 32.0 39.0 25.0 40.0 20 34.39443009646961 36.0 32.0 39.0 27.0 40.0 21 34.00330364583026 36.0 32.0 39.0 25.0 40.0 22 34.91847067004714 37.0 33.0 39.0 27.0 40.0 23 35.82587993798523 37.0 34.0 39.0 30.0 40.0 24 36.00746817015057 38.0 34.0 40.0 30.0 40.0 25 34.05556704706858 36.0 32.0 39.0 24.0 40.0 26 34.86891204264599 37.0 33.0 39.0 27.0 40.0 27 35.24116023568765 37.0 34.0 39.0 29.0 40.0 28 35.35245783763871 37.0 34.0 39.0 29.0 40.0 29 35.92499325284021 38.0 34.0 40.0 30.0 40.0 30 33.74307603507341 36.0 32.0 39.0 24.0 40.0 31 34.4413548690854 36.0 32.0 39.0 25.0 40.0 32 34.99500414679456 37.0 33.0 39.0 29.0 40.0 33 35.57562827384998 37.0 34.0 39.0 30.0 40.0 34 35.76459799732478 38.0 34.0 40.0 30.0 40.0 35 35.98587331887373 38.0 35.0 40.0 30.0 41.0 36 35.845772732018574 38.0 35.0 40.0 30.0 41.0 37 36.04332169078899 38.0 35.0 40.0 30.0 41.0 38 35.50209703696262 37.0 34.0 40.0 30.0 41.0 39 35.511688838720225 37.0 34.0 40.0 30.0 41.0 40 34.83337962771438 37.0 33.0 39.0 27.0 40.0 41 34.132301461129465 36.0 32.0 39.0 25.0 40.0 42 35.39886844712886 37.0 34.0 39.0 29.0 40.0 43 35.436975617635994 37.0 34.0 40.0 29.0 40.0 44 35.91707001877385 38.0 34.0 40.0 31.0 41.0 45 36.20175288256396 38.0 35.0 40.0 31.0 41.0 46 35.97828695030348 38.0 35.0 40.0 31.0 41.0 47 35.6220250935245 37.0 34.0 40.0 30.0 41.0 48 35.80614277187114 37.0 34.0 40.0 31.0 41.0 49 35.98128131026888 37.0 35.0 40.0 31.0 41.0 50 35.70576670389917 37.0 34.0 40.0 30.0 41.0 51 34.938651080235054 36.0 34.0 39.0 28.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 7.0 12 17.0 13 19.0 14 22.0 15 41.0 16 96.0 17 161.0 18 339.0 19 619.0 20 890.0 21 1234.0 22 1632.0 23 2090.0 24 2827.0 25 4126.0 26 5816.0 27 7667.0 28 10617.0 29 14843.0 30 20656.0 31 28862.0 32 39377.0 33 48667.0 34 55560.0 35 67983.0 36 78500.0 37 73355.0 38 37914.0 39 3682.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.09027010308873 3.9777708172041737 43.36975814633358 15.562200933373521 2 17.51148987138042 18.860921829475142 42.73621461681058 20.891373682333867 3 18.46988205767689 19.14282506042894 44.62266139501715 17.76463148687702 4 18.34006079338719 3.489414346530187 55.806398868447125 22.364125991635493 5 27.647004359551712 4.491342950744748 44.26195921760526 23.59969347209828 6 18.917460073558818 16.65691529704248 46.22129502128556 18.20432960811314 7 68.32893044219999 1.3718896578352746 24.592757194836302 5.706422705128433 8 66.07409858930187 12.489239018874319 12.210684743144984 9.225977648678837 9 62.64358645524909 3.3999775423002596 13.749234172739111 20.207201829711536 10 39.87620685511435 20.77199327844987 21.943733612281605 17.408066254154182 11 34.66188357061666 19.469249696131563 26.322985061689725 19.54588167156205 12 26.97504634363039 16.78279661400927 31.09071531713621 25.15144172522413 13 26.901369328692077 19.97238096926644 36.5930487509382 16.533200951103282 14 21.445133278568065 24.75724999556756 30.181572472376043 23.61604425348833 15 15.17904105622108 20.998146254784576 42.671599480714946 21.151213208279405 16 20.751505552370762 22.15136883619866 27.060543200537406 30.036582410893164 17 20.451872558463894 22.979348766106998 32.68324202505413 23.885536650374984 18 20.741064691965068 20.16878734331322 33.444833842571526 25.645314122150186 19 20.51786667612254 23.350688801290726 29.111285782109093 27.02015874047764 20 20.383908467143794 27.322549697510546 35.451252016760535 16.842289818585126 21 22.231743761585907 28.321326343866783 30.618512630486126 18.82841726406118 22 17.263470187403595 20.962292734146146 34.704041006971735 27.070196071478524 23 18.665106447526796 27.447249030280464 30.67583886403439 23.21180565815835 24 23.227171452717677 22.898776843353605 25.760754578711282 28.113297125217436 25 20.32855220725699 29.926263885851846 22.45848773001905 27.286696176872116 26 21.066307343470818 21.48118379657264 27.630456580795514 29.822052279161028 27 20.911664411046825 27.334960531577696 26.680732278609437 25.072642778766046 28 14.615628589045764 26.597402392730007 31.878113789618634 26.908855228605592 29 23.96886653625441 22.63086042539611 27.381845904720254 26.018427133629224 30 20.581102830655155 28.70409222628694 28.196036018998427 22.518768924059486 31 23.32291217266425 28.203521918911946 24.181623691691243 24.29194221673256 32 25.02556040825734 26.40552695810457 24.623685781321104 23.945226852316985 33 22.691732611534984 22.868242251601096 21.33225378776686 33.107771349097064 34 24.815955210678833 25.57597104926707 26.83852716889175 22.769546571162344 35 19.09239373469577 26.170706097659473 23.880217721489064 30.8566824461557 36 28.25927217353104 28.342405062044318 21.096053945758744 22.302268818665894 37 17.35054302323978 30.628559496159536 31.37202755599158 20.64886992460911 38 20.582875806950458 28.782103183280437 23.125520811786746 27.50950019798235 39 22.64957517517991 23.847122163976668 30.003486853380775 23.499815807462653 40 21.002283199473624 21.379336158275564 26.867682779081242 30.750697863169567 41 22.7362540162838 27.70649756412757 20.96327772097687 28.59397069861176 42 21.083840109057743 19.781884516204016 29.767484008738805 29.366791365999433 43 28.853613227191154 19.026202619670975 24.79921043455649 27.32097371858138 44 22.178357475360556 20.990660354871054 29.576002568845656 27.254979600922734 45 20.030298194913136 18.67810827369238 26.252657001975884 35.0389365294186 46 26.128154666572108 21.91851794941502 27.982884868829306 23.97044251518357 47 14.894379862141244 21.385049081893776 39.14002769782968 24.5805433581353 48 19.76494274271553 26.976031330461115 26.141944482202273 27.117081444621082 49 20.74185268142965 18.416101776719245 35.54620474724253 25.295840794608576 50 24.622700794490378 18.594778387812955 27.313881813400155 29.468639004296517 51 19.945392330104546 18.967891399291993 24.806696334470008 36.280019936133456 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 79.0 1 254.0 2 429.0 3 1296.0 4 2163.0 5 1438.5 6 714.0 7 726.5 8 739.0 9 767.0 10 795.0 11 839.0 12 883.0 13 874.0 14 865.0 15 817.5 16 770.0 17 788.5 18 807.0 19 778.0 20 749.0 21 919.5 22 1090.0 23 1174.5 24 1259.0 25 1294.5 26 1656.0 27 1982.0 28 2535.5 29 3089.0 30 3422.5 31 3756.0 32 4518.5 33 5281.0 34 5914.0 35 6547.0 36 7215.0 37 7883.0 38 9074.0 39 10265.0 40 11647.0 41 13029.0 42 15344.5 43 17660.0 44 22250.5 45 26841.0 46 64434.5 47 102028.0 48 87819.5 49 73611.0 50 71324.5 51 69038.0 52 54977.0 53 40916.0 54 35643.0 55 30370.0 56 26141.5 57 21913.0 58 19855.0 59 17797.0 60 15289.5 61 12782.0 62 11367.5 63 9953.0 64 8522.0 65 7091.0 66 5735.5 67 4380.0 68 3564.5 69 2749.0 70 2414.5 71 2080.0 72 1721.5 73 1363.0 74 1245.5 75 851.5 76 575.0 77 482.0 78 389.0 79 326.5 80 264.0 81 171.5 82 79.0 83 73.5 84 68.0 85 54.5 86 41.0 87 21.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 507621.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.526460263648225 #Duplication Level Percentage of deduplicated Percentage of total 1 69.70682098330848 21.27902500852207 2 12.415734258054812 7.580168369450524 3 5.215910808714454 4.776698821228652 4 2.5630222210194127 3.129599839391861 5 1.6350415635732796 2.4956015659916493 6 1.1500298850679256 2.106380495312038 7 0.8479450468879255 1.811933254570711 8 0.7062995617464719 1.7248660404708664 9 0.5992154716717474 1.6462734556815743 >10 4.912138835794265 26.409571460674503 >50 0.13957382086978184 2.892693142396868 >100 0.09196219038616467 5.071620374167211 >500 0.00521771292971147 1.0737348831265956 >1k 0.007826569394567207 6.17442354821472 >5k 0.0013044282324278676 2.8381403224494015 >10k+ 0.001956642348641802 8.989269418350787 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGC 17953 3.5366937144050383 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG 15261 3.006376804742121 No Hit GAATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC 11936 2.351360562309282 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 8492 1.6729016333051627 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAATCACGT 5763 1.135295821094872 No Hit CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 4800 0.9455873574970303 No Hit CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 4218 0.8309348904005153 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTA 3701 0.7290872521034394 No Hit GAACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCT 3533 0.6959916945910434 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCT 3102 0.6110858297824557 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTC 2983 0.5876431432111753 No Hit TCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 2553 0.502934275768733 No Hit TGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCTT 1374 0.2706743810835249 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGAATCACGTCGT 1329 0.26180949960699024 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1248 0.24585271294922786 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATG 1126 0.22181903427951172 No Hit CGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 1045 0.2058622476217493 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTAT 825 0.16252282706980206 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGAATCACG 781 0.15385494295941263 No Hit TCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 721 0.14203510099069977 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 663 0.13060925375427732 No Hit TGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTG 662 0.1304122563881321 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 621 0.1223353643761783 No Hit TTCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCT 581 0.11445546973036971 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCC 539 0.1061815803522707 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.9550432310720006 0.0 2 0.0 0.0 0.0 4.3481258655571775 0.0 3 0.0 0.0 0.0 5.361283319642016 0.0 4 0.0 0.0 0.0 7.3273170337712585 0.0 5 0.0 0.0 0.0 11.745573961676133 0.0 6 0.0 0.0 0.0 12.760701389422424 0.0 7 0.0 0.0 0.0 14.40129545467977 0.0 8 0.0 0.0 0.0 16.35807029260019 0.0 9 0.0 0.0 0.0 16.939803514827005 0.0 10 0.0 0.0 0.0 21.345649608664733 0.0 11 1.9699736614521465E-4 0.0 0.0 23.765368257026402 0.0 12 1.9699736614521465E-4 0.0 0.0 29.60653716059816 0.0 13 1.9699736614521465E-4 0.0 0.0 30.642152314423555 0.0 14 1.9699736614521465E-4 0.0 0.0 31.065893649001914 0.0 15 1.9699736614521465E-4 0.0 0.0 32.27841243762571 0.0 16 1.9699736614521465E-4 0.0 0.0 33.337076283290095 0.0 17 1.9699736614521465E-4 0.0 0.0 34.560626924418024 0.0 18 1.9699736614521465E-4 0.0 0.0 35.757582921116345 0.0 19 1.9699736614521465E-4 0.0 0.0 37.872743641417514 0.0 20 1.9699736614521465E-4 0.0 0.0 39.00252353626032 0.0 21 1.9699736614521465E-4 0.0 0.0 40.214648330151824 0.0 22 1.9699736614521465E-4 0.0 0.0 41.53453068332476 0.0 23 1.9699736614521465E-4 0.0 0.0 42.67790339643159 0.0 24 3.939947322904293E-4 0.0 0.0 43.61364088562136 0.0 25 3.939947322904293E-4 0.0 0.0 44.43177094722243 0.0 26 3.939947322904293E-4 0.0 0.0 45.15652425727068 0.0 27 3.939947322904293E-4 0.0 0.0 46.02981358139242 0.0 28 3.939947322904293E-4 0.0 0.0 46.821742993296176 0.0 29 3.939947322904293E-4 0.0 0.0 47.72793087756417 0.0 30 3.939947322904293E-4 0.0 0.0 48.74069433691672 0.0 31 3.939947322904293E-4 0.0 0.0 49.43826201043692 0.0 32 3.939947322904293E-4 0.0 0.0 50.13188973663422 0.0 33 3.939947322904293E-4 0.0 0.0 50.87259983334023 0.0 34 3.939947322904293E-4 0.0 0.0 51.63281266929461 0.0 35 3.939947322904293E-4 0.0 0.0 52.52383175636942 0.0 36 3.939947322904293E-4 0.0 0.0 53.23203728766146 0.0 37 3.939947322904293E-4 0.0 0.0 53.963094513426356 0.0 38 3.939947322904293E-4 0.0 0.0 54.80604624316173 0.0 39 3.939947322904293E-4 0.0 0.0 56.37158431191775 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACAACG 20 7.0295617E-4 45.0 37 ACCGGTC 20 7.0295617E-4 45.0 17 ACACGCA 20 7.0295617E-4 45.0 22 CAAGTCA 20 7.0295617E-4 45.0 14 CGTGCCA 20 7.0295617E-4 45.0 22 GGGTCGA 20 7.0295617E-4 45.0 7 GAGTACA 20 7.0295617E-4 45.0 9 CATCTAA 20 7.0295617E-4 45.0 44 TTCGTCG 35 1.2101373E-7 45.0 1 TGCGATT 25 3.8877173E-5 45.0 15 CGTAGAC 20 7.0295617E-4 45.0 31 TCTCGAG 25 3.8877173E-5 45.0 1 GCGATTA 20 7.0295617E-4 45.0 9 GCGATAA 25 3.8877173E-5 45.0 9 CTACCAT 20 7.0295617E-4 45.0 3 CTATTCC 40 6.8030204E-9 45.0 20 CAAGACT 20 7.0295617E-4 45.0 37 CATCCTA 25 3.8877173E-5 45.0 14 GCTAAAA 25 3.8877173E-5 45.0 33 CCCATGC 20 7.0295617E-4 45.0 13 >>END_MODULE