##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933755.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 335689 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.898635344023784 31.0 16.0 33.0 16.0 34.0 2 28.136114081784033 31.0 25.0 33.0 16.0 34.0 3 29.123948059066578 31.0 28.0 34.0 16.0 34.0 4 32.63997032968015 35.0 32.0 37.0 28.0 37.0 5 33.784738254753655 35.0 33.0 37.0 28.0 37.0 6 33.043671374397135 35.0 33.0 37.0 28.0 37.0 7 33.43793809150732 35.0 32.0 35.0 29.0 37.0 8 33.57902105818183 35.0 35.0 37.0 28.0 37.0 9 34.68628700970243 37.0 33.0 39.0 28.0 39.0 10 33.54090542138706 35.0 31.0 39.0 27.0 39.0 11 33.76235742011207 35.0 32.0 39.0 27.0 39.0 12 33.9939378412757 37.0 32.0 39.0 26.0 39.0 13 34.36364313397222 35.0 33.0 39.0 27.0 39.0 14 34.27703618527864 37.0 32.0 39.0 25.0 40.0 15 34.80424738373912 37.0 32.0 39.0 27.0 40.0 16 34.545141485124624 36.0 32.0 39.0 27.0 40.0 17 34.44049700764696 36.0 32.0 38.0 27.0 40.0 18 34.329215434524215 36.0 32.0 39.0 27.0 40.0 19 34.168602486229815 36.0 32.0 39.0 25.0 40.0 20 35.06380310346779 37.0 33.0 39.0 27.0 40.0 21 34.42689811104921 37.0 32.0 39.0 25.0 40.0 22 35.42825055333955 37.0 34.0 39.0 28.0 40.0 23 36.208603796966834 38.0 34.0 40.0 30.0 40.0 24 36.415256383140346 38.0 35.0 40.0 31.0 41.0 25 34.30715632624244 37.0 32.0 39.0 25.0 40.0 26 35.032807151857824 37.0 33.0 39.0 27.0 40.0 27 35.60096100855256 37.0 34.0 39.0 30.0 40.0 28 35.78490805477689 38.0 34.0 40.0 30.0 40.0 29 36.24700243380033 38.0 35.0 40.0 30.0 41.0 30 34.16233775905675 37.0 33.0 39.0 24.0 40.0 31 34.949625993106714 37.0 33.0 39.0 27.0 40.0 32 35.33281698238548 37.0 34.0 39.0 29.0 40.0 33 36.05332614413937 38.0 35.0 40.0 30.0 40.0 34 36.205073743852196 38.0 35.0 40.0 30.0 41.0 35 36.423788089571005 38.0 35.0 40.0 31.0 41.0 36 36.343043710100716 38.0 35.0 40.0 30.0 41.0 37 36.58376354304133 38.0 35.0 40.0 31.0 41.0 38 36.17674692944958 38.0 35.0 40.0 30.0 41.0 39 36.097313287000766 38.0 35.0 40.0 30.0 41.0 40 35.667141312345656 38.0 34.0 40.0 30.0 41.0 41 35.11829103723983 37.0 33.0 40.0 28.0 41.0 42 36.041779742559335 38.0 35.0 40.0 30.0 41.0 43 36.028761740777924 38.0 35.0 40.0 31.0 41.0 44 36.505387427053016 38.0 35.0 40.0 31.0 41.0 45 36.773918716430984 39.0 35.0 40.0 32.0 41.0 46 36.515724375835966 38.0 35.0 40.0 31.0 41.0 47 36.28032494362341 38.0 35.0 40.0 31.0 41.0 48 36.43215893282175 38.0 35.0 40.0 31.0 41.0 49 36.623723148509484 38.0 35.0 40.0 32.0 41.0 50 36.37745353586206 38.0 35.0 40.0 31.0 41.0 51 35.76606621009327 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 9.0 11 15.0 12 15.0 13 10.0 14 20.0 15 27.0 16 57.0 17 110.0 18 266.0 19 448.0 20 619.0 21 744.0 22 1003.0 23 1221.0 24 1659.0 25 2293.0 26 3059.0 27 4137.0 28 5669.0 29 7945.0 30 10919.0 31 15633.0 32 21547.0 33 27898.0 34 34201.0 35 44072.0 36 55256.0 37 57895.0 38 35097.0 39 3839.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.90009502843406 3.896463691095031 46.35064002692969 16.852801253541223 2 16.77862545391717 16.250755907998176 46.892808522173794 20.077810115910857 3 17.54034240025738 16.133385365621155 46.77067166335507 19.555600570766394 4 17.615709778991864 4.1023089824212295 55.66193709058086 22.62004414800604 5 25.750620365874365 4.800276446353619 45.49806517341944 23.951038014352573 6 19.652714268266163 15.052027322909002 47.53655913658177 17.75869927224306 7 73.46412900035449 1.5550107391067327 20.00899642228372 4.971863838255051 8 71.75689402989076 10.843667799659803 9.89338345909458 7.506054711354855 9 67.05492286014734 4.7007795906329966 11.219313114221794 17.02498443499787 10 37.36643142909062 27.786135381260628 19.120376300683073 15.727056888965679 11 32.72195395142528 22.48301255030698 25.175385550315916 19.619647947951822 12 26.611238378379987 17.87338876162162 30.355179943340417 25.16019291665798 13 24.272168584612544 21.624181906466998 35.81469753253756 18.288951976382904 14 21.30245554665181 26.92879421130868 27.83975644122983 23.92899380080968 15 15.637688455683682 22.993902093902392 39.42339486846456 21.945014581949362 16 17.84210980997292 23.1508926417011 29.898507249269414 29.108490299056566 17 18.903806797363035 24.355579122342405 31.970663322301295 24.76995075799326 18 17.837343493531215 22.52590939828234 32.73148658430869 26.905260523877754 19 19.8201311332811 25.78696352874238 29.52733035637152 24.865574981605 20 22.623618885337322 24.88940656381353 35.13371007092875 17.3532644799204 21 22.478246233865274 28.770379726473017 28.136757534503666 20.614616505158047 22 19.407844761073495 22.570891509700942 31.267035857594383 26.75422787163118 23 18.963683647661973 28.945541855705727 28.776635516802756 23.314138979829544 24 22.533654662500112 22.275379890315143 27.739663795953994 27.451301651230754 25 17.88053823628418 30.46331574761163 24.759524440777028 26.896621575327163 26 18.816523627524287 25.338036098889148 29.10819240427896 26.737247869307602 27 20.200840659062404 27.08489107477457 28.473974422754395 24.24029384340863 28 15.935881128067944 25.762238262201027 35.04732058542282 23.254560024308212 29 20.14870907298124 26.78044261206057 29.072742925743768 23.998105389214423 30 20.825228112925952 26.32734465532085 32.35464969063627 20.492777541116926 31 22.342704110054246 27.44266270268016 26.566256266961386 23.64837692030421 32 23.128848428158204 31.621828537723907 23.22387686221473 22.02544617190316 33 24.59657599742619 23.30132950439246 25.030608688399088 27.07148580978227 34 21.94441879239415 29.025675550881918 26.595449955166835 22.434455701557095 35 19.85855955959236 23.728808510258006 27.78702906559345 28.625602864556182 36 23.225068441325156 28.068837525209346 27.750983797503046 20.955110235962454 37 17.855217180187612 27.803413278361816 34.10716466729622 20.23420487415435 38 23.032628414991258 25.38450768419579 27.655359573891307 23.927504326921646 39 22.907512608396463 30.425483110855584 26.031237246379835 20.635767034368122 40 24.6776033769352 23.615012705212266 27.381296378493186 24.32608753935935 41 21.760617714610845 27.72953537351537 25.24807187605194 25.26177503582185 42 21.051032354351797 22.119580921626863 28.84544921042989 27.98393751359145 43 26.697032074330707 22.975134722913175 25.81198669006134 24.515846512694786 44 21.272666068891148 22.394835696135413 31.01740003396 25.315098201013438 45 20.144836440872353 21.635799802793656 28.186505962363974 30.032857793970013 46 25.52273086100528 25.683594040912865 27.431342701131108 21.362332396950748 47 17.900795081161434 23.04305473220749 36.68127344059531 22.374876746035767 48 19.939289044323765 25.268328720929194 28.41886388889716 26.373518345849877 49 20.078703800243677 20.68313230400758 35.1048142775009 24.13334961824784 50 24.085686453830778 20.06678800913941 29.326847171042242 26.520678365987564 51 19.729571120888682 20.790076529168367 26.324067812767176 33.15628453717578 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 29.0 1 173.5 2 318.0 3 826.5 4 1335.0 5 947.5 6 560.0 7 585.5 8 611.0 9 628.5 10 646.0 11 656.5 12 667.0 13 664.5 14 662.0 15 672.5 16 683.0 17 627.0 18 571.0 19 608.0 20 645.0 21 738.0 22 831.0 23 914.5 24 998.0 25 1101.5 26 1649.5 27 2094.0 28 2385.0 29 2676.0 30 3473.5 31 4271.0 32 4648.5 33 5026.0 34 6125.0 35 7224.0 36 7786.0 37 8348.0 38 9804.5 39 11261.0 40 12635.5 41 14010.0 42 16914.0 43 19818.0 44 40528.0 45 61238.0 46 51894.5 47 42551.0 48 40036.0 49 37521.0 50 30103.5 51 22686.0 52 20226.5 53 17767.0 54 16268.0 55 14769.0 56 13611.0 57 12453.0 58 11400.0 59 10347.0 60 9546.5 61 8746.0 62 7976.5 63 7207.0 64 6132.0 65 5057.0 66 4388.0 67 3719.0 68 2887.5 69 2056.0 70 1829.0 71 1602.0 72 1407.5 73 1213.0 74 1139.0 75 834.5 76 604.0 77 480.5 78 357.0 79 229.0 80 101.0 81 98.5 82 96.0 83 55.5 84 15.0 85 19.5 86 24.0 87 14.5 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 335689.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.929726109859452 #Duplication Level Percentage of deduplicated Percentage of total 1 71.43497340519257 21.380291886825077 2 12.048995514232033 7.212462712797797 3 4.570035157689931 4.10339701746264 4 2.2619995236339547 2.7080410481198727 5 1.3849994888623518 2.072632768197276 6 0.8389996877000097 1.506661851547134 7 0.6559997557761228 1.374372511295983 8 0.5579997922600755 1.3360624761362025 9 0.4079998481041308 1.0990191335958803 >10 5.590997918505377 37.102071861949796 >50 0.172999935593173 3.3856493570905757 >100 0.05799997840695973 2.872354745402957 >500 0.00399999851082481 0.7739824290520003 >1k 0.008999996649355822 5.696223352559037 >5k 0.001999999255412405 4.320354355516483 >10k+ 9.999996277062025E-4 3.056422492451287 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGC 10212 3.0421014689191486 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCG 7452 2.219911882724784 No Hit GAATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTC 6983 2.0801992320272635 No Hit GCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 3573 1.0643780403885739 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCATTAGACGT 2919 0.8695548558338224 No Hit CCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 2173 0.6473253517392586 No Hit GAACTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCT 2127 0.6336221919693525 No Hit CTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGCT 1896 0.5648084983422156 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATTAGACGTCGTA 1825 0.5436579691321431 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTC 1580 0.47067374861851297 No Hit TCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGC 1494 0.44505479774434076 No Hit GAATGACTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCT 1445 0.4304579536416147 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCATTAGACGTCGT 696 0.20733476521423103 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 677 0.20167476443970458 No Hit TGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTGCTT 608 0.18112002478484548 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATG 605 0.18022634045202554 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTAT 430 0.12809475437086112 No Hit CGCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG 387 0.115285278933775 No Hit TCCTGTCTCTTATACACATCTGACGCATTAGACGTCGTATGCCGTCTTCTG 359 0.10694422516078869 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6741358817238575 0.0 2 0.0 0.0 0.0 3.0206530449314695 0.0 3 0.0 0.0 0.0 3.704023664761133 0.0 4 0.0 0.0 0.0 5.282568091298791 0.0 5 0.0 0.0 0.0 8.796236993169273 0.0 6 0.0 0.0 0.0 9.593105523267072 0.0 7 0.0 0.0 0.0 10.70604041240553 0.0 8 0.0 0.0 0.0 12.31824694881274 0.0 9 0.0 0.0 0.0 12.802921751978767 0.0 10 0.0 0.0 0.0 16.221860114570333 0.0 11 0.0 0.0 0.0 18.097405634381822 0.0 12 0.0 0.0 0.0 23.096675792176686 0.0 13 0.0 0.0 0.0 23.974869596561103 0.0 14 0.0 0.0 0.0 24.302553851928423 0.0 15 0.0 0.0 0.0 25.20904766018547 0.0 16 0.0 0.0 0.0 26.10660462511432 0.0 17 0.0 0.0 0.0 27.093827918102768 0.0 18 0.0 0.0 0.0 28.23387123200343 0.0 19 0.0 0.0 0.0 29.898507249269414 0.0 20 0.0 0.0 0.0 30.78176526487314 0.0 21 0.0 0.0 0.0 31.810395931948918 0.0 22 0.0 0.0 0.0 32.956099246624106 0.0 23 0.0 0.0 0.0 33.90876674541018 0.0 24 0.0 0.0 0.0 34.63980052965692 0.0 25 0.0 0.0 0.0 35.329724834593925 0.0 26 0.0 0.0 0.0 35.912704914370146 0.0 27 0.0 0.0 0.0 36.5016428896985 0.0 28 0.0 0.0 0.0 37.11768928978906 0.0 29 0.0 0.0 0.0 37.74863042875995 0.0 30 0.0 0.0 0.0 38.39297683272314 0.0 31 0.0 0.0 0.0 39.059665345006835 0.0 32 0.0 0.0 0.0 39.6354959501205 0.0 33 0.0 0.0 0.0 40.27299077419874 0.0 34 0.0 0.0 0.0 40.82826663965754 0.0 35 0.0 0.0 0.0 41.48720988772346 0.0 36 0.0 0.0 0.0 42.06810470405643 0.0 37 0.0 0.0 0.0 42.612656357521395 0.0 38 0.0 0.0 0.0 43.21053117617795 0.0 39 0.0 0.0 0.0 43.84266389425927 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGGG 25 3.884884E-5 45.000004 3 CTTGTCG 25 3.884884E-5 45.000004 1 GTTCTCC 25 3.884884E-5 45.000004 16 CCTACTT 25 3.884884E-5 45.000004 12 GTTCGCG 25 3.884884E-5 45.000004 1 CCTCAAG 25 3.884884E-5 45.000004 24 GGACGTT 25 3.884884E-5 45.000004 8 CGGGACG 25 3.884884E-5 45.000004 6 ATGCCTA 25 3.884884E-5 45.000004 10 ATGGGCG 35 1.2085002E-7 45.0 5 GAGTGCC 20 7.0261426E-4 45.0 9 TCGTTGA 20 7.0261426E-4 45.0 24 GTACCAT 20 7.0261426E-4 45.0 9 TTAATCG 20 7.0261426E-4 45.0 20 GTCGAGT 20 7.0261426E-4 45.0 14 CTCAACG 35 1.2085002E-7 45.0 16 TAGACCA 20 7.0261426E-4 45.0 35 GAACTTC 20 7.0261426E-4 45.0 9 GGGTATC 20 7.0261426E-4 45.0 7 CGCATGG 20 7.0261426E-4 45.0 2 >>END_MODULE