##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933754.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 666923 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36594629365009 33.0 31.0 34.0 31.0 34.0 2 32.57578760966408 34.0 31.0 34.0 31.0 34.0 3 32.60660226143048 34.0 31.0 34.0 31.0 34.0 4 36.1330933256163 37.0 35.0 37.0 35.0 37.0 5 36.16152989175662 37.0 35.0 37.0 35.0 37.0 6 36.14436599127635 37.0 36.0 37.0 35.0 37.0 7 36.21931317408456 37.0 37.0 37.0 35.0 37.0 8 36.11792665720031 37.0 37.0 37.0 35.0 37.0 9 37.93777242650201 39.0 38.0 39.0 35.0 39.0 10 37.423206277186424 39.0 37.0 39.0 34.0 39.0 11 37.388392663021065 39.0 37.0 39.0 34.0 39.0 12 37.38880350505231 39.0 37.0 39.0 34.0 39.0 13 37.38644641135483 39.0 37.0 39.0 34.0 39.0 14 38.60912729055678 40.0 38.0 41.0 34.0 41.0 15 38.648541135933236 40.0 38.0 41.0 34.0 41.0 16 38.69430953798265 40.0 38.0 41.0 34.0 41.0 17 38.63388127265067 40.0 38.0 41.0 34.0 41.0 18 38.17244719405389 39.0 38.0 40.0 34.0 41.0 19 37.68982326295539 38.0 37.0 40.0 34.0 41.0 20 37.1179641427871 38.0 35.0 40.0 34.0 41.0 21 36.98768373560366 38.0 35.0 40.0 33.0 41.0 22 37.014025607154046 38.0 35.0 40.0 33.0 41.0 23 36.93389491740426 38.0 35.0 40.0 33.0 41.0 24 36.828420972136215 38.0 35.0 40.0 33.0 41.0 25 36.748723615769734 38.0 35.0 40.0 33.0 41.0 26 36.69648670086352 38.0 35.0 40.0 33.0 41.0 27 36.60541471804091 38.0 35.0 40.0 33.0 41.0 28 36.441973061357906 37.0 35.0 40.0 33.0 41.0 29 36.28496093252144 37.0 35.0 40.0 32.0 41.0 30 36.070024575550704 37.0 35.0 40.0 31.0 41.0 31 35.626667546328434 37.0 35.0 40.0 30.0 41.0 32 34.94833136658955 37.0 35.0 40.0 24.0 41.0 33 34.12533380915038 37.0 34.0 40.0 18.0 41.0 34 33.41776786825466 37.0 33.0 40.0 15.0 41.0 35 32.925962967239094 37.0 33.0 40.0 10.0 41.0 36 32.61716569978843 37.0 32.0 40.0 10.0 41.0 37 32.388004312341906 37.0 31.0 40.0 9.0 41.0 38 32.27159507169493 37.0 31.0 40.0 8.0 41.0 39 32.185270263583654 37.0 31.0 40.0 8.0 41.0 40 32.05076448105704 37.0 31.0 40.0 8.0 41.0 41 31.874868613018293 36.0 30.0 40.0 8.0 41.0 42 31.706993161129546 36.0 30.0 40.0 8.0 41.0 43 31.519997061129995 36.0 29.0 40.0 8.0 41.0 44 31.36191884220517 36.0 28.0 40.0 7.0 41.0 45 31.346723684743218 35.0 28.0 40.0 7.0 41.0 46 31.16007395156562 35.0 27.0 40.0 7.0 41.0 47 31.018774281288845 35.0 26.0 40.0 7.0 41.0 48 30.934947512681376 35.0 26.0 40.0 7.0 41.0 49 30.92560760387631 35.0 27.0 40.0 7.0 41.0 50 30.830724086588706 35.0 27.0 40.0 7.0 41.0 51 29.975431946416602 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 1.0 11 2.0 12 5.0 13 7.0 14 12.0 15 24.0 16 48.0 17 131.0 18 254.0 19 494.0 20 978.0 21 1554.0 22 2602.0 23 4361.0 24 8348.0 25 16867.0 26 26706.0 27 29259.0 28 25037.0 29 20995.0 30 18560.0 31 18380.0 32 19660.0 33 23897.0 34 34550.0 35 47405.0 36 61685.0 37 68239.0 38 114306.0 39 122511.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.972355129452726 3.766101933806451 37.66911622481156 39.592426711929264 2 43.615679771128 3.7629531445159334 38.99190761152337 13.629459472832695 3 16.30922910141051 4.189089295166009 64.96042271746514 14.54125888595835 4 13.000751211159308 4.076332650096038 65.20272955048783 17.720186588256816 5 12.691120264258393 4.828893290529791 65.3372278358971 17.14275860931472 6 15.259332786543576 5.316205918824212 66.6859592486689 12.738502045963326 7 60.89488591636516 1.6956980041174168 34.221941663430414 3.1874744160870145 8 62.21257926327327 1.8601847589601799 32.699277127944306 3.2279588498222433 9 57.33675401808005 4.5489509283680425 34.3267513641005 3.7875436894514056 10 23.717580590263044 25.58151390790241 39.435287132097706 11.265618369736837 11 19.561628553821055 18.627337788620277 46.57329256900722 15.237741088551452 12 16.18282770274829 18.10178986179814 49.75611877233204 15.95926366312153 13 17.17529609865007 17.95739538147582 51.14263565659004 13.724672863284068 14 15.693715766287863 19.240901873229742 51.13064026881664 13.934742091665756 15 13.32102806470912 18.718352793350956 52.12685722339761 15.833761918542322 16 15.18781028694467 19.81173238889647 49.55294689192006 15.447510432238804 17 14.81325430372022 19.659840791215778 49.215876495487485 16.311028409576515 18 16.160186408326 17.7645695230184 50.08149366568554 15.993750402970058 19 15.88804104821696 19.921190302328753 49.08902526978377 15.101743379670518 20 16.74271242707179 21.991144404976286 47.57130883175419 13.694834336197731 21 15.475399708811963 23.31318607995226 47.918425365446986 13.292988845788795 22 15.102643033753521 20.202632087962176 48.33796405282169 16.35676082546261 23 13.298836597328329 22.713266748935034 47.179059651563975 16.808837002172663 24 13.239909254891494 22.072563099488246 47.9673065706236 16.72022107499666 25 14.053646372969594 23.65445486210552 45.55263501183795 16.739263753086938 26 14.41515737199047 22.705469746882322 46.12676425914236 16.752608621984848 27 14.405711004118915 22.02413172135314 47.64687977472662 15.923277499801328 28 12.674026836681296 22.19716518998445 47.698160057457905 17.430647915876346 29 15.022873705060405 21.111132769450148 46.776614391766365 17.089379133723085 30 17.315042366210193 20.672851288679503 47.212796679676664 14.799309665433642 31 17.52556142163338 22.998607035594816 43.999982006918344 15.475849535853465 32 16.615861201368073 23.40105229539242 43.42585275961393 16.557233743625577 33 17.034500234659774 23.356819302978003 41.49219625054167 18.116484211820556 34 17.131512933277154 23.76781127656416 41.558020940948204 17.54265484921048 35 17.988883274381003 25.411029459172944 38.8514116322274 17.748675634218642 36 18.889287069121924 26.162690445523694 38.69172303249401 16.256299452860375 37 18.163716051178323 26.252206026782705 38.85980840366879 16.724269518370185 38 17.670405728997203 28.10594326481468 37.353487584023945 16.87016342216418 39 19.316172931507836 26.138849612324062 36.67514840543811 17.869829050729994 40 21.751236649508265 24.852644158321123 36.41065010503461 16.985469087135996 41 20.42439681942293 25.10934545667191 34.393025881548546 20.073231842356616 42 21.29481214473035 25.071709927532865 35.58356811805861 18.049909809678176 43 19.9057462405705 25.17621974350862 37.12137683060863 17.79665718531225 44 19.073116386749295 25.738053718345295 36.63031564363502 18.558514251270385 45 20.411201892872192 24.411813657648633 35.75735129842575 19.41963315105342 46 19.972920412101548 24.85819202516632 36.5196581914254 18.649229371306735 47 17.61312775237921 27.21783474254149 37.648874007943945 17.520163497135353 48 17.660509534084145 26.533197985374624 37.90002743944953 17.9062650410917 49 20.133958492959458 24.14791512663381 37.76687863516478 17.951247745241954 50 18.053958253051704 24.32229807638963 36.86482547460501 20.758918195953655 51 17.275757471252305 23.498514821051305 35.669934910027095 23.555792797669294 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 792.0 1 1798.0 2 2804.0 3 33364.5 4 63925.0 5 39847.0 6 15769.0 7 15123.0 8 14477.0 9 15056.5 10 15636.0 11 15438.0 12 15240.0 13 14804.0 14 14368.0 15 13551.5 16 12735.0 17 11834.0 18 10933.0 19 10255.0 20 9577.0 21 9073.0 22 8569.0 23 8406.0 24 8243.0 25 8141.0 26 8214.5 27 8390.0 28 9030.0 29 9670.0 30 10201.0 31 10732.0 32 12125.0 33 13518.0 34 14219.5 35 14921.0 36 16122.0 37 17323.0 38 18248.0 39 19173.0 40 21801.0 41 24429.0 42 27523.5 43 30618.0 44 32992.5 45 35367.0 46 40414.5 47 45462.0 48 49093.0 49 52724.0 50 51526.0 51 50328.0 52 44236.5 53 38145.0 54 32471.0 55 26797.0 56 23408.0 57 20019.0 58 17482.0 59 14945.0 60 12975.0 61 11005.0 62 9402.0 63 7799.0 64 6584.0 65 5369.0 66 4245.0 67 3121.0 68 2470.5 69 1820.0 70 1627.0 71 1434.0 72 1131.0 73 828.0 74 867.5 75 738.5 76 570.0 77 423.5 78 277.0 79 170.0 80 63.0 81 46.0 82 29.0 83 26.0 84 23.0 85 14.5 86 6.0 87 4.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 666923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.867840461922505 #Duplication Level Percentage of deduplicated Percentage of total 1 75.88533161479837 33.289256206780586 2 9.081113711708708 7.96737695043629 3 4.205485551501703 5.534567077145906 4 2.6550057456462253 4.658774739019847 5 1.7677122179395628 3.8772858779581956 6 1.2512226485798927 3.2933061318148114 7 0.9314171260310535 2.8601480521762834 8 0.7475059425787809 2.623317714670797 9 0.5684499062704135 2.244300281897877 >10 2.7614881731417893 19.356128964826066 >50 0.0991236140863681 2.9904575620513687 >100 0.04238388679195187 3.292591933375752 >500 0.0027344443091580966 0.8185372450611542 >1k 6.836110772895242E-4 0.7870492763007876 >5k 0.0 0.0 >10k+ 3.418055386447621E-4 6.40690198648435 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42729 6.406886552120709 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCC 3454 0.5179008671165937 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGC 1795 0.2691465131656878 No Hit CCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGC 952 0.1427451145034734 No Hit CTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGCT 751 0.11260670272280307 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCG 710 0.106459066488935 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 691 0.10361016189275223 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 690 0.10346021954558472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9988469433502816E-4 0.0 0.0 0.12160324355285393 0.0 2 2.9988469433502816E-4 0.0 0.0 0.4421799817969991 0.0 3 2.9988469433502816E-4 0.0 0.0 0.6994810495364532 0.0 4 2.9988469433502816E-4 0.0 0.0 1.1005768282095534 0.0 5 2.9988469433502816E-4 0.0 0.0 1.9432528192909826 0.0 6 2.9988469433502816E-4 0.0 0.0 2.949066084090667 0.0 7 2.9988469433502816E-4 0.0 0.0 3.9394352871320977 0.0 8 2.9988469433502816E-4 0.0 0.0 5.323703036182588 0.0 9 2.9988469433502816E-4 0.0 0.0 6.103853068495163 0.0 10 4.4982704150254226E-4 0.0 0.0 7.409850912324211 0.0 11 5.997693886700563E-4 0.0 0.0 9.961869661115301 0.0 12 5.997693886700563E-4 0.0 0.0 12.123288595535017 0.0 13 5.997693886700563E-4 0.0 0.0 12.871500907900913 0.0 14 5.997693886700563E-4 0.0 0.0 13.178732777247149 0.0 15 5.997693886700563E-4 0.0 0.0 13.515653231332553 0.0 16 7.497117358375705E-4 0.0 0.0 14.226080072212234 0.0 17 7.497117358375705E-4 0.0 0.0 15.180762996627797 0.0 18 7.497117358375705E-4 0.0 0.0 16.111605087843724 0.0 19 7.497117358375705E-4 0.0 0.0 16.704477128544074 0.0 20 7.497117358375705E-4 0.0 0.0 17.296749399855756 0.0 21 7.497117358375705E-4 0.0 0.0 17.923958238057466 0.0 22 7.497117358375705E-4 0.0 0.0 18.510532700176782 0.0 23 7.497117358375705E-4 0.0 0.0 18.96005985698499 0.0 24 7.497117358375705E-4 0.0 0.0 19.228156773720503 0.0 25 7.497117358375705E-4 0.0 0.0 19.432078365868325 0.0 26 7.497117358375705E-4 0.0 0.0 19.62295497381257 0.0 27 7.497117358375705E-4 0.0 0.0 19.808883484300285 0.0 28 7.497117358375705E-4 0.0 0.0 19.99811072642569 0.0 29 7.497117358375705E-4 0.0 0.0 20.18388929456624 0.0 30 8.996540830050845E-4 0.0 0.0 20.411651719913692 0.0 31 8.996540830050845E-4 0.0 0.0 20.582735938031828 0.0 32 8.996540830050845E-4 0.0 0.0 20.809148882254775 0.0 33 8.996540830050845E-4 0.0 0.0 20.974235406486205 0.0 34 8.996540830050845E-4 0.0 0.0 21.140371527147813 0.0 35 8.996540830050845E-4 0.0 0.0 21.317603381499815 0.0 36 8.996540830050845E-4 0.0 0.0 21.468745267444667 0.0 37 8.996540830050845E-4 0.0 0.0 21.636080926883615 0.0 38 8.996540830050845E-4 0.0 0.0 21.84600021291813 0.0 39 8.996540830050845E-4 0.0 0.0 22.18981801497324 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACACGC 20 7.031155E-4 45.0 9 CGGGCTA 35 1.2109012E-7 45.0 6 TCGTCGA 20 7.031155E-4 45.0 19 CGTCGAG 20 7.031155E-4 45.0 20 GATCTAT 20 7.031155E-4 45.0 9 CGTTTTT 18480 0.0 44.366882 1 TTGTTCG 75 0.0 42.0 1 GTTTTTT 20750 0.0 40.53253 2 CTTTTCG 90 0.0 40.0 1 TTACGGG 90 0.0 40.0 3 GATAAGC 40 3.455316E-7 39.375 9 CGGGACG 40 3.455316E-7 39.375 6 GGACCGA 220 0.0 38.863636 8 CGGGTGG 70 0.0 38.571426 6 TTTACGG 70 0.0 38.571426 2 CTACACG 35 6.244347E-6 38.571426 28 TTTTACG 35 6.244347E-6 38.571426 1 AGGCACG 170 0.0 38.38235 10 TTCGTTG 100 0.0 38.25 1 GTTTGCG 120 0.0 37.500004 1 >>END_MODULE